RNA–Protein interactions for RNA: ENST00000490458.1

SNAP29-203, Transcript of synaptosome associated protein 29, humanhuman

TSL 2

Gene SNAP29, Length 972 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP29-203ENST00000490458 SCAPERQ9BY12 1400 aa27.33■■□□□ 1.96
SNAP29-203ENST00000490458 HSPA2P54652 639 aa27.32■■□□□ 1.96
SNAP29-203ENST00000490458 MLECQ14165 292 aa27.28■■□□□ 1.96
SNAP29-203ENST00000490458 KIF14Q15058 1648 aa27.25■■□□□ 1.95
SNAP29-203ENST00000490458 ARHGEF12Q9NZN5 1544 aa27.24■■□□□ 1.95
SNAP29-203ENST00000490458 FMN1Q68DA7 1419 aa27.24■■□□□ 1.95
SNAP29-203ENST00000490458 ATP10AO60312 1499 aa27.23■■□□□ 1.95
SNAP29-203ENST00000490458 C9orf84Q5VXU9 1444 aa27.23■■□□□ 1.95
SNAP29-203ENST00000490458 ARHGAP35Q9NRY4 1499 aa27.22■■□□□ 1.95
SNAP29-203ENST00000490458 ATP1B4Q9UN42 357 aaPredicted RBP27.21■■□□□ 1.95
SNAP29-203ENST00000490458 EHMT2Q96KQ7 1210 aa27.2■■□□□ 1.94
SNAP29-203ENST00000490458 PREX1Q8TCU6 1659 aa27.19■■□□□ 1.94
SNAP29-203ENST00000490458 LRRIQ1Q96JM4 1722 aa27.19■■□□□ 1.94
SNAP29-203ENST00000490458 EFCAB2Q5VUJ9 269 aa27.18■■□□□ 1.94
SNAP29-203ENST00000490458 UBTFP17480 764 aaKnown RBP27.17■■□□□ 1.94
SNAP29-203ENST00000490458 KDM5CP41229 1560 aa27.15■■□□□ 1.94
SNAP29-203ENST00000490458 ARHGAP5Q13017 1502 aa27.15■■□□□ 1.94
SNAP29-203ENST00000490458 TROQ12816 1431 aaPredicted RBP27.15■■□□□ 1.94
SNAP29-203ENST00000490458 ZNF518AQ6AHZ1 1483 aa27.14■■□□□ 1.94
SNAP29-203ENST00000490458 CDK11AQ9UQ88 783 aaPredicted RBP27.13■■□□□ 1.93
SNAP29-203ENST00000490458 CDC42BPBQ9Y5S2 1711 aa27.1■■□□□ 1.93
SNAP29-203ENST00000490458 DIP2CQ9Y2E4 1556 aa27.09■■□□□ 1.93
SNAP29-203ENST00000490458 CLIP1P30622 1438 aa27.09■■□□□ 1.93
SNAP29-203ENST00000490458 CERKQ8TCT0 537 aa27.09■■□□□ 1.93
SNAP29-203ENST00000490458 CEBPAP49715 358 aaPredicted RBP27.08■■□□□ 1.93
SNAP29-203ENST00000490458 ABCA6Q8N139 1617 aa27.06■■□□□ 1.92
SNAP29-203ENST00000490458 AFAP1Q8N556 730 aa27.06■■□□□ 1.92
SNAP29-203ENST00000490458 REREQ9P2R6 1566 aa27.05■■□□□ 1.92
SNAP29-203ENST00000490458 STRCQ7RTU9 1775 aa27.05■■□□□ 1.92
SNAP29-203ENST00000490458 PREX2Q70Z35 1606 aa27.04■■□□□ 1.92
SNAP29-203ENST00000490458 SETD1BQ9UPS6 1966 aaKnown RBP27.02■■□□□ 1.92
SNAP29-203ENST00000490458 ITSN2Q9NZM3 1697 aa27.01■■□□□ 1.91
SNAP29-203ENST00000490458 ABCC1P33527 1531 aa27■■□□□ 1.91
SNAP29-203ENST00000490458 MYT1LQ9UL68 1186 aa27■■□□□ 1.91
SNAP29-203ENST00000490458 C3P01024 1663 aa27■■□□□ 1.91
SNAP29-203ENST00000490458 UHRF1BP1Q6BDS2 1440 aa26.99■■□□□ 1.91
SNAP29-203ENST00000490458 MLH3Q9UHC1 1453 aa26.99■■□□□ 1.91
SNAP29-203ENST00000490458 TRAPPC8Q9Y2L5 1435 aa26.96■■□□□ 1.91
SNAP29-203ENST00000490458 AGLP35573 1532 aa26.95■■□□□ 1.91
SNAP29-203ENST00000490458 CDC42BPAQ5VT25 1732 aa26.95■■□□□ 1.9
SNAP29-203ENST00000490458 CCDC18Q5T9S5 1454 aa26.94■■□□□ 1.9
SNAP29-203ENST00000490458 KIDINS220Q9ULH0 1771 aa26.94■■□□□ 1.9
SNAP29-203ENST00000490458 CASKIN1Q8WXD9 1431 aa26.91■■□□□ 1.9
SNAP29-203ENST00000490458 CHIC1Q5VXU3 224 aa26.91■■□□□ 1.9
SNAP29-203ENST00000490458 DMRT2Q9Y5R5 561 aa26.89■■□□□ 1.9
SNAP29-203ENST00000490458 PTPRTO14522 1441 aa26.83■■□□□ 1.89
SNAP29-203ENST00000490458 SAMD9LQ8IVG5 1584 aa26.83■■□□□ 1.89
SNAP29-203ENST00000490458 ESF1Q9H501 851 aaKnown RBP26.82■■□□□ 1.88
SNAP29-203ENST00000490458 CNTLNQ9NXG0 1405 aa26.81■■□□□ 1.88
SNAP29-203ENST00000490458 FYCO1Q9BQS8 1478 aa26.81■■□□□ 1.88
SNAP29-203ENST00000490458 MROH2AA6NES4 1674 aa26.79■■□□□ 1.88
SNAP29-203ENST00000490458 SYCP2Q9BX26 1530 aa26.79■■□□□ 1.88
SNAP29-203ENST00000490458 SUPT6HQ7KZ85 1726 aaKnown RBP26.76■■□□□ 1.88
SNAP29-203ENST00000490458 LTBP4Q8N2S1 1624 aa26.76■■□□□ 1.87
SNAP29-203ENST00000490458 NCOA1Q15788 1441 aa26.75■■□□□ 1.87
SNAP29-203ENST00000490458 ZNF777Q9ULD5 760 aaPredicted RBP26.74■■□□□ 1.87
SNAP29-203ENST00000490458 GPATCH8Q9UKJ3 1502 aaKnown RBP26.74■■□□□ 1.87
SNAP29-203ENST00000490458 CAMSAP1Q5T5Y3 1602 aa26.71■■□□□ 1.87
SNAP29-203ENST00000490458 NPATQ14207 1427 aa26.71■■□□□ 1.87
SNAP29-203ENST00000490458 DISP3Q9P2K9 1392 aa26.71■■□□□ 1.87
SNAP29-203ENST00000490458 ATP7AQ04656 1500 aa26.7■■□□□ 1.87
SNAP29-203ENST00000490458 INO80Q9ULG1 1556 aaPredicted RBP26.7■■□□□ 1.86
SNAP29-203ENST00000490458 CLTCQ00610 1675 aaKnown RBP26.7■■□□□ 1.86
SNAP29-203ENST00000490458 SPAG9O60271 1321 aaKnown RBP26.69■■□□□ 1.86
SNAP29-203ENST00000490458 PLXNC1O60486 1568 aa26.68■■□□□ 1.86
SNAP29-203ENST00000490458 HNRNPMP52272 730 aaKnown RBP eCLIP26.67■■□□□ 1.86
SNAP29-203ENST00000490458 ZMYM3Q14202 1370 aa26.67■■□□□ 1.86
SNAP29-203ENST00000490458 IQSEC2Q5JU85 1478 aa26.66■■□□□ 1.86
SNAP29-203ENST00000490458 MYO3AQ8NEV4 1616 aa26.65■■□□□ 1.86
SNAP29-203ENST00000490458 ILDR2Q71H61 639 aa26.65■■□□□ 1.86
SNAP29-203ENST00000490458 ZNF142P52746 1687 aaPredicted RBP26.65■■□□□ 1.86
SNAP29-203ENST00000490458 KIAA1107Q9UPP5 1409 aa26.65■■□□□ 1.86
SNAP29-203ENST00000490458 PLEKHH2Q8IVE3 1493 aa26.64■■□□□ 1.86
SNAP29-203ENST00000490458 SPATA31D1Q6ZQQ2 1576 aa26.63■■□□□ 1.85
SNAP29-203ENST00000490458 A2MP01023 1474 aa26.63■■□□□ 1.85
SNAP29-203ENST00000490458 CCNB3Q8WWL7 1395 aa26.59■■□□□ 1.85
SNAP29-203ENST00000490458 CFDP1Q9UEE9 299 aaPredicted RBP26.59■■□□□ 1.85
SNAP29-203ENST00000490458 ADGBQ8N7X0 1667 aa26.59■■□□□ 1.85
SNAP29-203ENST00000490458 CEP170BQ9Y4F5 1589 aaPredicted RBP26.58■■□□□ 1.85
SNAP29-203ENST00000490458 PTPRKQ15262 1439 aa26.56■■□□□ 1.84
SNAP29-203ENST00000490458 NCKAP5LQ9HCH0 1330 aa26.56■■□□□ 1.84
SNAP29-203ENST00000490458 PLA2R1Q13018 1463 aa26.55■■□□□ 1.84
SNAP29-203ENST00000490458 MTUS2Q5JR59 1369 aa26.55■■□□□ 1.84
SNAP29-203ENST00000490458 TIAM1Q13009 1591 aa26.54■■□□□ 1.84
SNAP29-203ENST00000490458 GGT6Q6P531 493 aa26.52■■□□□ 1.84
SNAP29-203ENST00000490458 ZNF335Q9H4Z2 1342 aaPredicted RBP26.52■■□□□ 1.84
SNAP29-203ENST00000490458 TCOF1Q13428 1488 aaKnown RBP26.51■■□□□ 1.83
SNAP29-203ENST00000490458 SOCS7O14512 581 aa26.5■■□□□ 1.83
SNAP29-203ENST00000490458 EHBP1L1Q8N3D4 1523 aa26.49■■□□□ 1.83
SNAP29-203ENST00000490458 ZNF644Q9H582 1327 aaPredicted RBP26.47■■□□□ 1.83
SNAP29-203ENST00000490458 PKD2Q13563 968 aa26.47■■□□□ 1.83
SNAP29-203ENST00000490458 MBD5Q9P267 1494 aa26.47■■□□□ 1.83
SNAP29-203ENST00000490458 DNMT1P26358 1616 aaKnown RBP26.43■■□□□ 1.82
SNAP29-203ENST00000490458 PPP6R1Q9UPN7 881 aa26.43■■□□□ 1.82
SNAP29-203ENST00000490458 A2ML1A8K2U0 1454 aa26.42■■□□□ 1.82
SNAP29-203ENST00000490458 RTEL1-TNFRSF6BF6WH68 1400 aa26.42■■□□□ 1.82
SNAP29-203ENST00000490458 CEP162Q5TB80 1403 aa26.4■■□□□ 1.82
SNAP29-203ENST00000490458 POLR1AO95602 1720 aaPredicted RBP26.4■■□□□ 1.82
SNAP29-203ENST00000490458 UBAP1LF5GYI3 381 aa26.4■■□□□ 1.82
SNAP29-203ENST00000490458 DHX29Q7Z478 1369 aaKnown RBP26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms