RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-215ENST00000490140 SCAPERQ9BY12 1400 aa19.42■□□□□ 0.7
FDPS-215ENST00000490140 LMTK3Q96Q04 1460 aa19.42■□□□□ 0.7
FDPS-215ENST00000490140 ARHGAP35Q9NRY4 1499 aa19.41■□□□□ 0.7
FDPS-215ENST00000490140 EFCAB2Q5VUJ9 269 aa19.41■□□□□ 0.7
FDPS-215ENST00000490140 YEATS2Q9ULM3 1422 aa19.41■□□□□ 0.7
FDPS-215ENST00000490140 FBXO41Q8TF61 875 aa19.39■□□□□ 0.69
FDPS-215ENST00000490140 ZNF518AQ6AHZ1 1483 aa19.39■□□□□ 0.69
FDPS-215ENST00000490140 FER1L4A9Z1Z3 1794 aa19.39■□□□□ 0.69
FDPS-215ENST00000490140 TROQ12816 1431 aaPredicted RBP19.37■□□□□ 0.69
FDPS-215ENST00000490140 C9orf84Q5VXU9 1444 aa19.37■□□□□ 0.69
FDPS-215ENST00000490140 ARHGAP5Q13017 1502 aa19.36■□□□□ 0.69
FDPS-215ENST00000490140 ATP10AO60312 1499 aa19.36■□□□□ 0.69
FDPS-215ENST00000490140 CCDC18Q5T9S5 1454 aa19.34■□□□□ 0.69
FDPS-215ENST00000490140 EHMT2Q96KQ7 1210 aa19.33■□□□□ 0.68
FDPS-215ENST00000490140 KDM5CP41229 1560 aa19.32■□□□□ 0.68
FDPS-215ENST00000490140 SIGLEC1Q9BZZ2 1709 aa19.31■□□□□ 0.68
FDPS-215ENST00000490140 ARHGEF12Q9NZN5 1544 aa19.31■□□□□ 0.68
FDPS-215ENST00000490140 MLECQ14165 292 aa19.3■□□□□ 0.68
FDPS-215ENST00000490140 CHIC1Q5VXU3 224 aa19.3■□□□□ 0.68
FDPS-215ENST00000490140 PLPPR3Q6T4P5 718 aa19.28■□□□□ 0.68
FDPS-215ENST00000490140 PREX1Q8TCU6 1659 aa19.27■□□□□ 0.68
FDPS-215ENST00000490140 PREX2Q70Z35 1606 aa19.27■□□□□ 0.68
FDPS-215ENST00000490140 MYT1LQ9UL68 1186 aa19.27■□□□□ 0.68
FDPS-215ENST00000490140 CASKIN1Q8WXD9 1431 aa19.26■□□□□ 0.67
FDPS-215ENST00000490140 REREQ9P2R6 1566 aa19.26■□□□□ 0.67
FDPS-215ENST00000490140 LRRIQ1Q96JM4 1722 aa19.25■□□□□ 0.67
FDPS-215ENST00000490140 HSPA2P54652 639 aa19.24■□□□□ 0.67
FDPS-215ENST00000490140 CDC42BPBQ9Y5S2 1711 aa19.23■□□□□ 0.67
FDPS-215ENST00000490140 DIP2CQ9Y2E4 1556 aa19.23■□□□□ 0.67
FDPS-215ENST00000490140 FYCO1Q9BQS8 1478 aa19.22■□□□□ 0.67
FDPS-215ENST00000490140 MLH3Q9UHC1 1453 aa19.22■□□□□ 0.67
FDPS-215ENST00000490140 ABCC1P33527 1531 aa19.22■□□□□ 0.67
FDPS-215ENST00000490140 AFAP1Q8N556 730 aa19.2■□□□□ 0.66
FDPS-215ENST00000490140 ITSN2Q9NZM3 1697 aa19.2■□□□□ 0.66
FDPS-215ENST00000490140 UHRF1BP1Q6BDS2 1440 aa19.19■□□□□ 0.66
FDPS-215ENST00000490140 ESF1Q9H501 851 aaKnown RBP19.19■□□□□ 0.66
FDPS-215ENST00000490140 ABCA6Q8N139 1617 aa19.18■□□□□ 0.66
FDPS-215ENST00000490140 SETD1BQ9UPS6 1966 aaKnown RBP19.18■□□□□ 0.66
FDPS-215ENST00000490140 AGLP35573 1532 aa19.18■□□□□ 0.66
FDPS-215ENST00000490140 DMRT2Q9Y5R5 561 aa19.17■□□□□ 0.66
FDPS-215ENST00000490140 CDC42BPAQ5VT25 1732 aa19.15■□□□□ 0.66
FDPS-215ENST00000490140 CNTLNQ9NXG0 1405 aa19.14■□□□□ 0.65
FDPS-215ENST00000490140 TRAPPC8Q9Y2L5 1435 aa19.12■□□□□ 0.65
FDPS-215ENST00000490140 CERKQ8TCT0 537 aa19.11■□□□□ 0.65
FDPS-215ENST00000490140 PLEKHH2Q8IVE3 1493 aa19.1■□□□□ 0.65
FDPS-215ENST00000490140 CEBPAP49715 358 aaPredicted RBP19.1■□□□□ 0.65
FDPS-215ENST00000490140 KIDINS220Q9ULH0 1771 aa19.1■□□□□ 0.65
FDPS-215ENST00000490140 C3P01024 1663 aa19.1■□□□□ 0.65
FDPS-215ENST00000490140 SAMD9LQ8IVG5 1584 aa19.08■□□□□ 0.65
FDPS-215ENST00000490140 SYCP2Q9BX26 1530 aa19.07■□□□□ 0.64
FDPS-215ENST00000490140 SPAG9O60271 1321 aaKnown RBP19.05■□□□□ 0.64
FDPS-215ENST00000490140 MROH2AA6NES4 1674 aa19.05■□□□□ 0.64
FDPS-215ENST00000490140 ZNF777Q9ULD5 760 aaPredicted RBP19.05■□□□□ 0.64
FDPS-215ENST00000490140 GPATCH8Q9UKJ3 1502 aaKnown RBP19.05■□□□□ 0.64
FDPS-215ENST00000490140 STRCQ7RTU9 1775 aa19.04■□□□□ 0.64
FDPS-215ENST00000490140 KIAA1107Q9UPP5 1409 aa19.04■□□□□ 0.64
FDPS-215ENST00000490140 MTUS2Q5JR59 1369 aa19.04■□□□□ 0.64
FDPS-215ENST00000490140 CCNB3Q8WWL7 1395 aa19.04■□□□□ 0.64
FDPS-215ENST00000490140 ATP7AQ04656 1500 aa19.03■□□□□ 0.64
FDPS-215ENST00000490140 PTPRTO14522 1441 aa19.02■□□□□ 0.64
FDPS-215ENST00000490140 NPATQ14207 1427 aa19.02■□□□□ 0.64
FDPS-215ENST00000490140 CFDP1Q9UEE9 299 aaPredicted RBP19.02■□□□□ 0.64
FDPS-215ENST00000490140 INO80Q9ULG1 1556 aaPredicted RBP19.01■□□□□ 0.63
FDPS-215ENST00000490140 EHBP1L1Q8N3D4 1523 aa18.99■□□□□ 0.63
FDPS-215ENST00000490140 SUPT6HQ7KZ85 1726 aaKnown RBP18.98■□□□□ 0.63
FDPS-215ENST00000490140 PLXNC1O60486 1568 aa18.98■□□□□ 0.63
FDPS-215ENST00000490140 A2MP01023 1474 aa18.97■□□□□ 0.63
FDPS-215ENST00000490140 ADGBQ8N7X0 1667 aa18.96■□□□□ 0.63
FDPS-215ENST00000490140 NCOA1Q15788 1441 aa18.95■□□□□ 0.62
FDPS-215ENST00000490140 HNRNPMP52272 730 aaKnown RBP eCLIP18.95■□□□□ 0.62
FDPS-215ENST00000490140 ZMYM3Q14202 1370 aa18.93■□□□□ 0.62
FDPS-215ENST00000490140 IQSEC2Q5JU85 1478 aa18.93■□□□□ 0.62
FDPS-215ENST00000490140 PPP6R1Q9UPN7 881 aa18.93■□□□□ 0.62
FDPS-215ENST00000490140 CLTCQ00610 1675 aaKnown RBP18.92■□□□□ 0.62
FDPS-215ENST00000490140 TIAM1Q13009 1591 aa18.92■□□□□ 0.62
FDPS-215ENST00000490140 ZNF142P52746 1687 aaPredicted RBP18.92■□□□□ 0.62
FDPS-215ENST00000490140 CAMSAP1Q5T5Y3 1602 aa18.91■□□□□ 0.62
FDPS-215ENST00000490140 CEP162Q5TB80 1403 aa18.91■□□□□ 0.62
FDPS-215ENST00000490140 MYO3AQ8NEV4 1616 aa18.89■□□□□ 0.62
FDPS-215ENST00000490140 RTEL1-TNFRSF6BF6WH68 1400 aa18.89■□□□□ 0.61
FDPS-215ENST00000490140 PLA2R1Q13018 1463 aa18.88■□□□□ 0.61
FDPS-215ENST00000490140 FAM135AQ9P2D6 1515 aa18.87■□□□□ 0.61
FDPS-215ENST00000490140 CEP170BQ9Y4F5 1589 aaPredicted RBP18.87■□□□□ 0.61
FDPS-215ENST00000490140 GGT6Q6P531 493 aa18.86■□□□□ 0.61
FDPS-215ENST00000490140 LTBP4Q8N2S1 1624 aa18.85■□□□□ 0.61
FDPS-215ENST00000490140 PTPRKQ15262 1439 aa18.84■□□□□ 0.61
FDPS-215ENST00000490140 PKD2Q13563 968 aa18.84■□□□□ 0.61
FDPS-215ENST00000490140 CCDC141Q6ZP82 1450 aa18.84■□□□□ 0.61
FDPS-215ENST00000490140 MBD5Q9P267 1494 aa18.84■□□□□ 0.61
FDPS-215ENST00000490140 RSPH4AQ5TD94 716 aa18.82■□□□□ 0.6
FDPS-215ENST00000490140 DHX29Q7Z478 1369 aaKnown RBP18.81■□□□□ 0.6
FDPS-215ENST00000490140 CAMSAP2Q08AD1 1489 aa18.8■□□□□ 0.6
FDPS-215ENST00000490140 DISP3Q9P2K9 1392 aa18.8■□□□□ 0.6
FDPS-215ENST00000490140 KDM5DQ9BY66 1539 aa18.79■□□□□ 0.6
FDPS-215ENST00000490140 ZNF644Q9H582 1327 aaPredicted RBP18.79■□□□□ 0.6
FDPS-215ENST00000490140 A2ML1A8K2U0 1454 aa18.79■□□□□ 0.6
FDPS-215ENST00000490140 TCOF1Q13428 1488 aaKnown RBP18.79■□□□□ 0.6
FDPS-215ENST00000490140 NCOA2Q15596 1464 aa18.79■□□□□ 0.6
FDPS-215ENST00000490140 ARHGEF5Q12774 1597 aa18.76■□□□□ 0.59
FDPS-215ENST00000490140 NCKAP5LQ9HCH0 1330 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms