RNA–Protein interactions for RNA: ENST00000489994.5

IFRD1-215, Transcript of interferon related developmental regulator 1, humanhuman

TSL 1 (best)

Gene IFRD1, Length 1,721 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1-215ENST00000489994 PLCG2P16885 1265 aa8.84□□□□□ -0.99
IFRD1-215ENST00000489994 EFCAB3Q8N7B9 438 aa8.84□□□□□ -0.99
IFRD1-215ENST00000489994 HS6ST3Q8IZP7 471 aa8.83□□□□□ -1
IFRD1-215ENST00000489994 OCEL1Q9H607 264 aa8.83□□□□□ -1
IFRD1-215ENST00000489994 SOX12O15370 315 aa8.83□□□□□ -1
IFRD1-215ENST00000489994 IRX5P78411 483 aaPredicted RBP8.83□□□□□ -1
IFRD1-215ENST00000489994 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.83□□□□□ -11e-6■□□□□ 11.3
IFRD1-215ENST00000489994 TIMELESSQ9UNS1 1208 aa8.83□□□□□ -1
IFRD1-215ENST00000489994 COLQQ9Y215 455 aaPredicted RBP8.8□□□□□ -1
IFRD1-215ENST00000489994 TSHZ2Q9NRE2 1034 aa8.8□□□□□ -1
IFRD1-215ENST00000489994 POTEFA5A3E0 1075 aa8.79□□□□□ -1
IFRD1-215ENST00000489994 NLRP6P59044 892 aa8.77□□□□□ -1.01
IFRD1-215ENST00000489994 ILDR1Q86SU0 546 aaPredicted RBP8.77□□□□□ -1.01
IFRD1-215ENST00000489994 HOMEZQ8IX15 550 aa8.77□□□□□ -1.01
IFRD1-215ENST00000489994 PDCD7Q8N8D1 485 aaKnown RBP8.76□□□□□ -1.01
IFRD1-215ENST00000489994 ERCC6Q03468 1493 aa8.75□□□□□ -1.01
IFRD1-215ENST00000489994 NBR1Q14596 966 aa8.74□□□□□ -1.01
IFRD1-215ENST00000489994 PHF8Q9UPP1 1060 aa8.74□□□□□ -1.01
IFRD1-215ENST00000489994 POTEB2H3BUK9 544 aa8.74□□□□□ -1.01
IFRD1-215ENST00000489994 L3MBTL3Q96JM7 780 aaPredicted RBP8.74□□□□□ -1.01
IFRD1-215ENST00000489994 MAMSTRQ6ZN01 415 aa8.73□□□□□ -1.01
IFRD1-215ENST00000489994 G3V3G9 751 aa8.72□□□□□ -1.01
IFRD1-215ENST00000489994 MFRPQ9BY79 579 aa8.72□□□□□ -1.01
IFRD1-215ENST00000489994 NCAPD3P42695 1498 aa8.72□□□□□ -1.01
IFRD1-215ENST00000489994 RYDENQ9NUL5 291 aaKnown RBP8.71□□□□□ -1.01
IFRD1-215ENST00000489994 SCUBE2Q9NQ36 999 aa8.71□□□□□ -1.02
IFRD1-215ENST00000489994 FBXO22Q8NEZ5 403 aa8.7□□□□□ -1.02
IFRD1-215ENST00000489994 DPY19L2Q6NUT2 758 aa8.69□□□□□ -1.02
IFRD1-215ENST00000489994 NESP48681 1621 aa8.69□□□□□ -1.02
IFRD1-215ENST00000489994 MS4A4AQ96JQ5 239 aa8.68□□□□□ -1.02
IFRD1-215ENST00000489994 TULP1O00294 542 aaPredicted RBP8.68□□□□□ -1.02
IFRD1-215ENST00000489994 BOLA1Q9Y3E2 137 aa8.68□□□□□ -1.02
IFRD1-215ENST00000489994 THOC2Q8NI27 1593 aaKnown RBP8.68□□□□□ -1.02
IFRD1-215ENST00000489994 POTEJP0CG39 1038 aa8.67□□□□□ -1.02
IFRD1-215ENST00000489994 ATAD2BQ9ULI0 1458 aa8.66□□□□□ -1.02
IFRD1-215ENST00000489994 NKX1-1Q15270 411 aaPredicted RBP8.66□□□□□ -1.02
IFRD1-215ENST00000489994 FAM9AQ8IZU1 332 aaPredicted RBP8.66□□□□□ -1.02
IFRD1-215ENST00000489994 HMGXB3Q12766 1538 aa8.65□□□□□ -1.02
IFRD1-215ENST00000489994 C3orf67Q6ZVT6 689 aa8.65□□□□□ -1.03
IFRD1-215ENST00000489994 OTUD5Q96G74 571 aa8.64□□□□□ -1.03
IFRD1-215ENST00000489994 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.64□□□□□ -1.03
IFRD1-215ENST00000489994 KIF21AQ7Z4S6 1674 aa8.64□□□□□ -1.03
IFRD1-215ENST00000489994 SMARCA4P51532 1647 aa8.64□□□□□ -1.03
IFRD1-215ENST00000489994 SMARCA2P51531 1590 aa8.63□□□□□ -1.03
IFRD1-215ENST00000489994 MICALL2Q8IY33 904 aa8.61□□□□□ -1.03
IFRD1-215ENST00000489994 TMEM121BQ9BXQ6 578 aaPredicted RBP8.61□□□□□ -1.03
IFRD1-215ENST00000489994 GTPBP6O43824 516 aaPredicted RBP8.6□□□□□ -1.03
IFRD1-215ENST00000489994 PODXL2Q9NZ53 605 aa8.59□□□□□ -1.03
IFRD1-215ENST00000489994 SLAIN1Q8ND83 568 aa8.58□□□□□ -1.04
IFRD1-215ENST00000489994 LAMC3Q9Y6N6 1575 aa8.57□□□□□ -1.04
IFRD1-215ENST00000489994 PPP1R37O75864 691 aa8.57□□□□□ -1.04
IFRD1-215ENST00000489994 BAZ1BQ9UIG0 1483 aaKnown RBP8.55□□□□□ -1.04
IFRD1-215ENST00000489994 PEG3Q9GZU2 1588 aa8.54□□□□□ -1.04
IFRD1-215ENST00000489994 GTF3C3Q9Y5Q9 886 aa8.52□□□□□ -1.05
IFRD1-215ENST00000489994 BAZ1AQ9NRL2 1556 aaPredicted RBP8.51□□□□□ -1.05
IFRD1-215ENST00000489994 SNPHO15079 494 aa8.49□□□□□ -1.05
IFRD1-215ENST00000489994 TMC2Q8TDI7 906 aa8.49□□□□□ -1.05
IFRD1-215ENST00000489994 UBE2Q2Q8WVN8 375 aa8.49□□□□□ -1.05
IFRD1-215ENST00000489994 PDS5BQ9NTI5 1447 aa8.48□□□□□ -1.05
IFRD1-215ENST00000489994 TMEM92Q6UXU6 159 aa8.47□□□□□ -1.05
IFRD1-215ENST00000489994 WDR62O43379 1518 aa8.47□□□□□ -1.05
IFRD1-215ENST00000489994 MROH2BQ7Z745 1585 aa8.46□□□□□ -1.06
IFRD1-215ENST00000489994 MRC2Q9UBG0 1479 aa8.46□□□□□ -1.06
IFRD1-215ENST00000489994 NPM2Q86SE8 214 aaKnown RBP8.46□□□□□ -1.06
IFRD1-215ENST00000489994 C2orf72A6NCS6 295 aa8.44□□□□□ -1.06
IFRD1-215ENST00000489994 KIF3CO14782 793 aa8.44□□□□□ -1.06
IFRD1-215ENST00000489994 PDE4AP27815 886 aa8.43□□□□□ -1.06
IFRD1-215ENST00000489994 GPHNQ9NQX3 736 aaPredicted RBP8.43□□□□□ -1.06
IFRD1-215ENST00000489994 CADPSQ9ULU8 1353 aa8.42□□□□□ -1.06
IFRD1-215ENST00000489994 DOK7Q18PE1 504 aa8.41□□□□□ -1.06
IFRD1-215ENST00000489994 TMEM132AQ24JP5 1023 aa8.4□□□□□ -1.06
IFRD1-215ENST00000489994 FAM163AQ96GL9 167 aaPredicted RBP8.4□□□□□ -1.06
IFRD1-215ENST00000489994 RIMBP2O15034 1052 aa8.4□□□□□ -1.07
IFRD1-215ENST00000489994 CENPBP07199 599 aaPredicted RBP8.4□□□□□ -1.07
IFRD1-215ENST00000489994 CRISPLD2Q9H0B8 497 aa8.4□□□□□ -1.07
IFRD1-215ENST00000489994 FOXK1P85037 733 aa8.39□□□□□ -1.07
IFRD1-215ENST00000489994 WIZO95785 1651 aa8.38□□□□□ -1.07
IFRD1-215ENST00000489994 PDIA4P13667 645 aaKnown RBP8.38□□□□□ -1.07
IFRD1-215ENST00000489994 ZNF710Q8N1W2 664 aa8.38□□□□□ -1.07
IFRD1-215ENST00000489994 NCKAP5LQ9HCH0 1330 aa8.38□□□□□ -1.07
IFRD1-215ENST00000489994 CADPS2Q86UW7 1296 aa8.37□□□□□ -1.07
IFRD1-215ENST00000489994 LARP6Q9BRS8 491 aaKnown RBP8.37□□□□□ -1.07
IFRD1-215ENST00000489994 RIMBP3CA6NJZ7 1639 aa8.37□□□□□ -1.07
IFRD1-215ENST00000489994 RIMBP3BA6NNM3 1639 aa8.37□□□□□ -1.07
IFRD1-215ENST00000489994 RIMBP3Q9UFD9 1639 aa8.37□□□□□ -1.07
IFRD1-215ENST00000489994 CEP164Q9UPV0 1460 aa8.37□□□□□ -1.07
IFRD1-215ENST00000489994 HOXB3P14651 431 aaPredicted RBP8.36□□□□□ -1.07
IFRD1-215ENST00000489994 DSG2Q14126 1118 aa8.36□□□□□ -1.07
IFRD1-215ENST00000489994 PLPP6Q8IY26 295 aa8.36□□□□□ -1.07
IFRD1-215ENST00000489994 DDX27Q96GQ7 796 aaKnown RBP8.36□□□□□ -1.07
IFRD1-215ENST00000489994 PPP1R15BQ5SWA1 713 aa8.35□□□□□ -1.07
IFRD1-215ENST00000489994 P3H3Q8IVL6 736 aa8.35□□□□□ -1.07
IFRD1-215ENST00000489994 ST18O60284 1047 aa8.34□□□□□ -1.07
IFRD1-215ENST00000489994 ZSWIM6Q9HCJ5 1215 aa8.34□□□□□ -1.07
IFRD1-215ENST00000489994 FANCD2Q9BXW9 1451 aa8.34□□□□□ -1.07
IFRD1-215ENST00000489994 C14orf37Q86TY3 774 aa8.34□□□□□ -1.07
IFRD1-215ENST00000489994 PRDM2Q13029 1718 aa8.33□□□□□ -1.08
IFRD1-215ENST00000489994 MFSD10Q14728 455 aa8.33□□□□□ -1.08
IFRD1-215ENST00000489994 SLC34A2O95436 690 aa8.32□□□□□ -1.08
IFRD1-215ENST00000489994 URB2Q14146 1524 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms