RNA–Protein interactions for RNA: ENST00000489556.5

CNIH3-209, Transcript of cornichon family AMPA receptor auxiliary protein 3, humanhuman

TSL 5

Gene CNIH3, Length 866 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3-209ENST00000489556 MYO5CQ9NQX4 1742 aa13.22□□□□□ -0.29
CNIH3-209ENST00000489556 TTC37Q6PGP7 1564 aa13.21□□□□□ -0.29
CNIH3-209ENST00000489556 ARHGAP5Q13017 1502 aa13.2□□□□□ -0.3
CNIH3-209ENST00000489556 EFCAB2Q5VUJ9 269 aa13.2□□□□□ -0.3
CNIH3-209ENST00000489556 MAP3K4Q9Y6R4 1608 aa13.2□□□□□ -0.3
CNIH3-209ENST00000489556 ITSN2Q9NZM3 1697 aa13.18□□□□□ -0.3
CNIH3-209ENST00000489556 TEX14Q8IWB6 1497 aa13.17□□□□□ -0.3
CNIH3-209ENST00000489556 CDC42BPAQ5VT25 1732 aa13.17□□□□□ -0.3
CNIH3-209ENST00000489556 PLCH2O75038 1416 aa13.17□□□□□ -0.3
CNIH3-209ENST00000489556 FAM50AQ14320 339 aaKnown RBP13.16□□□□□ -0.3
CNIH3-209ENST00000489556 GPATCH8Q9UKJ3 1502 aaKnown RBP13.16□□□□□ -0.3
CNIH3-209ENST00000489556 PREX2Q70Z35 1606 aa13.15□□□□□ -0.3
CNIH3-209ENST00000489556 CDC42BPBQ9Y5S2 1711 aa13.15□□□□□ -0.3
CNIH3-209ENST00000489556 FANCAO15360 1455 aa13.15□□□□□ -0.3
CNIH3-209ENST00000489556 MYOM3Q5VTT5 1437 aa13.14□□□□□ -0.31
CNIH3-209ENST00000489556 MYT1LQ9UL68 1186 aa13.14□□□□□ -0.31
CNIH3-209ENST00000489556 PHLDB1Q86UU1 1377 aa13.14□□□□□ -0.31
CNIH3-209ENST00000489556 CFAP74Q9C0B2 1584 aa13.14□□□□□ -0.31
CNIH3-209ENST00000489556 AKNAQ7Z591 1439 aa13.12□□□□□ -0.31
CNIH3-209ENST00000489556 ZNF644Q9H582 1327 aaPredicted RBP13.11□□□□□ -0.31
CNIH3-209ENST00000489556 NEO1Q92859 1461 aa13.1□□□□□ -0.31
CNIH3-209ENST00000489556 ARAP3Q8WWN8 1544 aa13.1□□□□□ -0.31
CNIH3-209ENST00000489556 PPRC1Q5VV67 1664 aaKnown RBP13.1□□□□□ -0.31
CNIH3-209ENST00000489556 HNRNPMP52272 730 aaKnown RBP eCLIP13.1□□□□□ -0.31
CNIH3-209ENST00000489556 MIA2Q96PC5 1412 aa13.1□□□□□ -0.31
CNIH3-209ENST00000489556 ITGAEP38570 1179 aa13.09□□□□□ -0.31
CNIH3-209ENST00000489556 FGD6Q6ZV73 1430 aa13.09□□□□□ -0.31
CNIH3-209ENST00000489556 PTPN23Q9H3S7 1636 aa13.09□□□□□ -0.31
CNIH3-209ENST00000489556 ADGRL1O94910 1474 aa13.09□□□□□ -0.31
CNIH3-209ENST00000489556 SCAPERQ9BY12 1400 aa13.08□□□□□ -0.32
CNIH3-209ENST00000489556 PLEKHH2Q8IVE3 1493 aa13.08□□□□□ -0.32
CNIH3-209ENST00000489556 SAMD9LQ8IVG5 1584 aa13.07□□□□□ -0.32
CNIH3-209ENST00000489556 CAMSAP2Q08AD1 1489 aa13.06□□□□□ -0.32
CNIH3-209ENST00000489556 RAPGEF3O95398 923 aa13.06□□□□□ -0.32
CNIH3-209ENST00000489556 TSPY4P0CV99 314 aa13.06□□□□□ -0.32
CNIH3-209ENST00000489556 TSPY10P0CW01 314 aa13.06□□□□□ -0.32
CNIH3-209ENST00000489556 DENND4BO75064 1496 aaPredicted RBP13.05□□□□□ -0.32
CNIH3-209ENST00000489556 RSPH4AQ5TD94 716 aa13.05□□□□□ -0.32
CNIH3-209ENST00000489556 KDM6BO15054 1643 aa13.05□□□□□ -0.32
CNIH3-209ENST00000489556 AFAP1Q8N556 730 aa13.04□□□□□ -0.32
CNIH3-209ENST00000489556 SYCP2Q9BX26 1530 aa13.03□□□□□ -0.32
CNIH3-209ENST00000489556 ABCC1P33527 1531 aa13.03□□□□□ -0.32
CNIH3-209ENST00000489556 KIAA1107Q9UPP5 1409 aa13.02□□□□□ -0.33
CNIH3-209ENST00000489556 CHIC2Q9UKJ5 165 aa13.01□□□□□ -0.33
CNIH3-209ENST00000489556 SPAG9O60271 1321 aaKnown RBP13.01□□□□□ -0.33
CNIH3-209ENST00000489556 TCOF1Q13428 1488 aaKnown RBP13□□□□□ -0.33
CNIH3-209ENST00000489556 RRBP1Q9P2E9 1410 aaKnown RBP13□□□□□ -0.33
CNIH3-209ENST00000489556 TRAPPC8Q9Y2L5 1435 aa13□□□□□ -0.33
CNIH3-209ENST00000489556 ARHGEF12Q9NZN5 1544 aa12.99□□□□□ -0.33
CNIH3-209ENST00000489556 ZNF518AQ6AHZ1 1483 aa12.99□□□□□ -0.33
CNIH3-209ENST00000489556 CCDC141Q6ZP82 1450 aa12.99□□□□□ -0.33
CNIH3-209ENST00000489556 POGZQ7Z3K3 1410 aa12.98□□□□□ -0.33
CNIH3-209ENST00000489556 COL17A1Q9UMD9 1497 aaPredicted RBP12.97□□□□□ -0.33
CNIH3-209ENST00000489556 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.97□□□□□ -0.33
CNIH3-209ENST00000489556 TRIM26Q12899 539 aaPredicted RBP12.97□□□□□ -0.33
CNIH3-209ENST00000489556 ARHGEF5Q12774 1597 aa12.97□□□□□ -0.33
CNIH3-209ENST00000489556 MBD5Q9P267 1494 aa12.97□□□□□ -0.33
CNIH3-209ENST00000489556 DAPK1P53355 1430 aa12.96□□□□□ -0.33
CNIH3-209ENST00000489556 RICTORQ6R327 1708 aa12.96□□□□□ -0.33
CNIH3-209ENST00000489556 DNMT1P26358 1616 aaKnown RBP12.96□□□□□ -0.33
CNIH3-209ENST00000489556 MAPK8IP2Q13387 824 aaPredicted RBP12.96□□□□□ -0.33
CNIH3-209ENST00000489556 ABCC5O15440 1437 aa12.95□□□□□ -0.34
CNIH3-209ENST00000489556 RRP7BPQ9NSQ0 103 aa12.94□□□□□ -0.34
CNIH3-209ENST00000489556 C9orf84Q5VXU9 1444 aa12.94□□□□□ -0.34
CNIH3-209ENST00000489556 HECW2Q9P2P5 1572 aa12.93□□□□□ -0.34
CNIH3-209ENST00000489556 ANKRD30AQ9BXX3 1397 aa12.93□□□□□ -0.34
CNIH3-209ENST00000489556 CROCC2H7BZ55 1655 aa12.93□□□□□ -0.34
CNIH3-209ENST00000489556 ARID4BQ4LE39 1312 aaPredicted RBP12.92□□□□□ -0.34
CNIH3-209ENST00000489556 FRMPD1Q5SYB0 1578 aa12.92□□□□□ -0.34
CNIH3-209ENST00000489556 ATP7AQ04656 1500 aa12.92□□□□□ -0.34
CNIH3-209ENST00000489556 ZFYVE16Q7Z3T8 1539 aa12.92□□□□□ -0.34
CNIH3-209ENST00000489556 KDM5CP41229 1560 aa12.91□□□□□ -0.34
CNIH3-209ENST00000489556 MAGI2Q86UL8 1455 aa12.91□□□□□ -0.34
CNIH3-209ENST00000489556 MLH3Q9UHC1 1453 aa12.91□□□□□ -0.34
CNIH3-209ENST00000489556 ADGBQ8N7X0 1667 aa12.9□□□□□ -0.34
CNIH3-209ENST00000489556 RTEL1-TNFRSF6BF6WH68 1400 aa12.9□□□□□ -0.34
CNIH3-209ENST00000489556 SHANK2Q9UPX8 1470 aa12.9□□□□□ -0.34
CNIH3-209ENST00000489556 ZMYM4Q5VZL5 1548 aa12.89□□□□□ -0.35
CNIH3-209ENST00000489556 INO80Q9ULG1 1556 aaPredicted RBP12.89□□□□□ -0.35
CNIH3-209ENST00000489556 MAST1Q9Y2H9 1570 aa12.89□□□□□ -0.35
CNIH3-209ENST00000489556 KIDINS220Q9ULH0 1771 aa12.89□□□□□ -0.35
CNIH3-209ENST00000489556 YEATS2Q9ULM3 1422 aa12.88□□□□□ -0.35
CNIH3-209ENST00000489556 DMRT2Q9Y5R5 561 aa12.88□□□□□ -0.35
CNIH3-209ENST00000489556 ATP10AO60312 1499 aa12.88□□□□□ -0.35
CNIH3-209ENST00000489556 PTPRKQ15262 1439 aa12.88□□□□□ -0.35
CNIH3-209ENST00000489556 PCGF6Q9BYE7 350 aa12.87□□□□□ -0.35
CNIH3-209ENST00000489556 KIF15Q9NS87 1388 aa12.86□□□□□ -0.35
CNIH3-209ENST00000489556 MLECQ14165 292 aa12.86□□□□□ -0.35
CNIH3-209ENST00000489556 ROCK1Q13464 1354 aa12.85□□□□□ -0.35
CNIH3-209ENST00000489556 ABCA6Q8N139 1617 aa12.85□□□□□ -0.35
CNIH3-209ENST00000489556 NCOA1Q15788 1441 aa12.85□□□□□ -0.35
CNIH3-209ENST00000489556 DIP2CQ9Y2E4 1556 aa12.85□□□□□ -0.35
CNIH3-209ENST00000489556 A2MP01023 1474 aa12.85□□□□□ -0.35
CNIH3-209ENST00000489556 ARHGEF40Q8TER5 1519 aa12.84□□□□□ -0.35
CNIH3-209ENST00000489556 KIF3BO15066 747 aa12.84□□□□□ -0.35
CNIH3-209ENST00000489556 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.84□□□□□ -0.35
CNIH3-209ENST00000489556 ESF1Q9H501 851 aaKnown RBP12.84□□□□□ -0.35
CNIH3-209ENST00000489556 PLXNC1O60486 1568 aa12.84□□□□□ -0.35
CNIH3-209ENST00000489556 DUOX2Q9NRD8 1548 aa12.83□□□□□ -0.35
CNIH3-209ENST00000489556 DHX29Q7Z478 1369 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms