RNA–Protein interactions for RNA: ENST00000489365.1

PRDM1-207, Transcript of PR/SET domain 1, humanhuman

TSL 3

Gene PRDM1, Length 649 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-207ENST00000489365 ZNF692Q9BU19 519 aaPredicted RBP8.3□□□□□ -1.08
PRDM1-207ENST00000489365 CFAP43Q8NDM7 1665 aa8.3□□□□□ -1.08
PRDM1-207ENST00000489365 ARID3CA6NKF2 412 aa8.29□□□□□ -1.08
PRDM1-207ENST00000489365 MAGI3Q5TCQ9 1506 aa8.29□□□□□ -1.08
PRDM1-207ENST00000489365 PHLDB1Q86UU1 1377 aa8.28□□□□□ -1.08
PRDM1-207ENST00000489365 PROM2Q8N271 834 aa8.28□□□□□ -1.08
PRDM1-207ENST00000489365 SSUH2Q9Y2M2 353 aa8.28□□□□□ -1.08
PRDM1-207ENST00000489365 PPRC1Q5VV67 1664 aaKnown RBP8.27□□□□□ -1.08
PRDM1-207ENST00000489365 UBTFP17480 764 aaKnown RBP8.27□□□□□ -1.09
PRDM1-207ENST00000489365 RAPGEF6Q8TEU7 1601 aa8.26□□□□□ -1.09
PRDM1-207ENST00000489365 EFCAB5A4FU69 1503 aa8.26□□□□□ -1.09
PRDM1-207ENST00000489365 KDM4FA0A1W2PPD8 638 aa8.26□□□□□ -1.09
PRDM1-207ENST00000489365 PLEKHD1A6NEE1 506 aa8.26□□□□□ -1.09
PRDM1-207ENST00000489365 SAMD9Q5K651 1589 aa8.26□□□□□ -1.09
PRDM1-207ENST00000489365 ADGRL1O94910 1474 aa8.26□□□□□ -1.09
PRDM1-207ENST00000489365 ATP10BO94823 1461 aa8.25□□□□□ -1.09
PRDM1-207ENST00000489365 CDK11AQ9UQ88 783 aaPredicted RBP8.24□□□□□ -1.09
PRDM1-207ENST00000489365 KIF21BO75037 1637 aa8.24□□□□□ -1.09
PRDM1-207ENST00000489365 FHOD3Q2V2M9 1422 aa8.23□□□□□ -1.09
PRDM1-207ENST00000489365 ATP1B4Q9UN42 357 aaPredicted RBP8.23□□□□□ -1.09
PRDM1-207ENST00000489365 COL17A1Q9UMD9 1497 aaPredicted RBP8.22□□□□□ -1.09
PRDM1-207ENST00000489365 ABCA9Q8IUA7 1624 aa8.21□□□□□ -1.09
PRDM1-207ENST00000489365 FMN1Q68DA7 1419 aa8.21□□□□□ -1.09
PRDM1-207ENST00000489365 NEO1Q92859 1461 aa8.21□□□□□ -1.09
PRDM1-207ENST00000489365 ARAP3Q8WWN8 1544 aa8.21□□□□□ -1.1
PRDM1-207ENST00000489365 AKT1S1Q96B36 256 aa8.21□□□□□ -1.1
PRDM1-207ENST00000489365 ARID4BQ4LE39 1312 aaPredicted RBP8.21□□□□□ -1.1
PRDM1-207ENST00000489365 NUP153P49790 1475 aaKnown RBP8.2□□□□□ -1.1
PRDM1-207ENST00000489365 CFAP74Q9C0B2 1584 aa8.2□□□□□ -1.1
PRDM1-207ENST00000489365 CLIP1P30622 1438 aa8.18□□□□□ -1.1
PRDM1-207ENST00000489365 RAPGEF3O95398 923 aa8.17□□□□□ -1.1
PRDM1-207ENST00000489365 POGZQ7Z3K3 1410 aa8.17□□□□□ -1.1
PRDM1-207ENST00000489365 FANCAO15360 1455 aa8.17□□□□□ -1.1
PRDM1-207ENST00000489365 DENND4BO75064 1496 aaPredicted RBP8.17□□□□□ -1.1
PRDM1-207ENST00000489365 HECW1Q76N89 1606 aa8.17□□□□□ -1.1
PRDM1-207ENST00000489365 MYT1LQ9UL68 1186 aa8.15□□□□□ -1.1
PRDM1-207ENST00000489365 AKNAQ7Z591 1439 aa8.14□□□□□ -1.11
PRDM1-207ENST00000489365 EFCAB2Q5VUJ9 269 aa8.14□□□□□ -1.11
PRDM1-207ENST00000489365 CDK13Q14004 1512 aaKnown RBP8.13□□□□□ -1.11
PRDM1-207ENST00000489365 KIF14Q15058 1648 aa8.12□□□□□ -1.11
PRDM1-207ENST00000489365 SP7Q8TDD2 431 aaPredicted RBP8.12□□□□□ -1.11
PRDM1-207ENST00000489365 FBXO3Q9UK99 471 aa8.12□□□□□ -1.11
PRDM1-207ENST00000489365 HECW2Q9P2P5 1572 aa8.12□□□□□ -1.11
PRDM1-207ENST00000489365 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.12□□□□□ -1.11
PRDM1-207ENST00000489365 CCDC18Q5T9S5 1454 aa8.12□□□□□ -1.11
PRDM1-207ENST00000489365 MAGI2Q86UL8 1455 aa8.12□□□□□ -1.11
PRDM1-207ENST00000489365 REM2Q8IYK8 340 aaPredicted RBP8.11□□□□□ -1.11
PRDM1-207ENST00000489365 ARHGEF40Q8TER5 1519 aa8.11□□□□□ -1.11
PRDM1-207ENST00000489365 ARHGAP35Q9NRY4 1499 aa8.11□□□□□ -1.11
PRDM1-207ENST00000489365 PLCH2O75038 1416 aa8.11□□□□□ -1.11
PRDM1-207ENST00000489365 TTC37Q6PGP7 1564 aa8.1□□□□□ -1.11
PRDM1-207ENST00000489365 ARHGAP5Q13017 1502 aa8.1□□□□□ -1.11
PRDM1-207ENST00000489365 ZFYVE16Q7Z3T8 1539 aa8.1□□□□□ -1.11
PRDM1-207ENST00000489365 TROQ12816 1431 aaPredicted RBP8.1□□□□□ -1.11
PRDM1-207ENST00000489365 SCAPERQ9BY12 1400 aa8.1□□□□□ -1.11
PRDM1-207ENST00000489365 MYO5CQ9NQX4 1742 aa8.09□□□□□ -1.11
PRDM1-207ENST00000489365 PTPRMP28827 1452 aa8.09□□□□□ -1.11
PRDM1-207ENST00000489365 ESF1Q9H501 851 aaKnown RBP8.09□□□□□ -1.11
PRDM1-207ENST00000489365 ZMYM4Q5VZL5 1548 aa8.08□□□□□ -1.12
PRDM1-207ENST00000489365 ZNF518AQ6AHZ1 1483 aa8.08□□□□□ -1.12
PRDM1-207ENST00000489365 FRMPD1Q5SYB0 1578 aa8.08□□□□□ -1.12
PRDM1-207ENST00000489365 RICTORQ6R327 1708 aa8.08□□□□□ -1.12
PRDM1-207ENST00000489365 BCORL1Q5H9F3 1711 aa8.07□□□□□ -1.12
PRDM1-207ENST00000489365 CASKIN1Q8WXD9 1431 aa8.07□□□□□ -1.12
PRDM1-207ENST00000489365 MLECQ14165 292 aa8.07□□□□□ -1.12
PRDM1-207ENST00000489365 STAG3Q9UJ98 1225 aa8.07□□□□□ -1.12
PRDM1-207ENST00000489365 FYCO1Q9BQS8 1478 aa8.06□□□□□ -1.12
PRDM1-207ENST00000489365 C9orf84Q5VXU9 1444 aa8.06□□□□□ -1.12
PRDM1-207ENST00000489365 ADAMTSL3P82987 1691 aa8.06□□□□□ -1.12
PRDM1-207ENST00000489365 PIP4P2Q8N4L2 257 aa8.06□□□□□ -1.12
PRDM1-207ENST00000489365 SPDYE1Q8NFV5 336 aaPredicted RBP8.06□□□□□ -1.12
PRDM1-207ENST00000489365 MADDQ8WXG6 1647 aa8.05□□□□□ -1.12
PRDM1-207ENST00000489365 ATP10AO60312 1499 aa8.05□□□□□ -1.12
PRDM1-207ENST00000489365 PCF11O94913 1555 aaKnown RBP8.04□□□□□ -1.12
PRDM1-207ENST00000489365 RIMS1Q86UR5 1692 aaKnown RBP8.04□□□□□ -1.12
PRDM1-207ENST00000489365 YEATS2Q9ULM3 1422 aa8.03□□□□□ -1.12
PRDM1-207ENST00000489365 MTUS2Q5JR59 1369 aa8.03□□□□□ -1.12
PRDM1-207ENST00000489365 ZNF777Q9ULD5 760 aaPredicted RBP8.03□□□□□ -1.12
PRDM1-207ENST00000489365 PITPNM1O00562 1244 aa8.02□□□□□ -1.13
PRDM1-207ENST00000489365 VASPP50552 380 aaPredicted RBP8.02□□□□□ -1.13
PRDM1-207ENST00000489365 ILDR1Q86SU0 546 aaPredicted RBP8.02□□□□□ -1.13
PRDM1-207ENST00000489365 AFAP1Q8N556 730 aa8.02□□□□□ -1.13
PRDM1-207ENST00000489365 FER1L4A9Z1Z3 1794 aa8.02□□□□□ -1.13
PRDM1-207ENST00000489365 PLEKHH2Q8IVE3 1493 aa8.01□□□□□ -1.13
PRDM1-207ENST00000489365 CCNB3Q8WWL7 1395 aa8.01□□□□□ -1.13
PRDM1-207ENST00000489365 PREX2Q70Z35 1606 aa8.01□□□□□ -1.13
PRDM1-207ENST00000489365 CFDP1Q9UEE9 299 aaPredicted RBP8.01□□□□□ -1.13
PRDM1-207ENST00000489365 CLEC11AQ9Y240 323 aa8.01□□□□□ -1.13
PRDM1-207ENST00000489365 KDM5CP41229 1560 aa8□□□□□ -1.13
PRDM1-207ENST00000489365 SPAG9O60271 1321 aaKnown RBP8□□□□□ -1.13
PRDM1-207ENST00000489365 MLH3Q9UHC1 1453 aa8□□□□□ -1.13
PRDM1-207ENST00000489365 ABCC1P33527 1531 aa7.99□□□□□ -1.13
PRDM1-207ENST00000489365 FXR2P51116 673 aaKnown RBP eCLIP7.99□□□□□ -1.13
PRDM1-207ENST00000489365 LMTK3Q96Q04 1460 aa7.99□□□□□ -1.13
PRDM1-207ENST00000489365 UHRF1BP1Q6BDS2 1440 aa7.98□□□□□ -1.13
PRDM1-207ENST00000489365 CNTLNQ9NXG0 1405 aa7.98□□□□□ -1.13
PRDM1-207ENST00000489365 FBXO41Q8TF61 875 aa7.98□□□□□ -1.13
PRDM1-207ENST00000489365 ARHGEF12Q9NZN5 1544 aa7.98□□□□□ -1.13
PRDM1-207ENST00000489365 CDC42BPBQ9Y5S2 1711 aa7.98□□□□□ -1.13
PRDM1-207ENST00000489365 REREQ9P2R6 1566 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms