RNA–Protein interactions for RNA: ENST00000489333.1

GABRE-210, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-210ENST00000489333 EFCAB5A4FU69 1503 aa12.71□□□□□ -0.38
GABRE-210ENST00000489333 ARHGAP35Q9NRY4 1499 aa12.7□□□□□ -0.38
GABRE-210ENST00000489333 RANGAP1P46060 587 aaPredicted RBP12.69□□□□□ -0.38
GABRE-210ENST00000489333 RAPGEF6Q8TEU7 1601 aa12.69□□□□□ -0.38
GABRE-210ENST00000489333 ATP10BO94823 1461 aa12.68□□□□□ -0.38
GABRE-210ENST00000489333 ABCA9Q8IUA7 1624 aa12.66□□□□□ -0.38
GABRE-210ENST00000489333 TIAM1Q13009 1591 aa12.65□□□□□ -0.38
GABRE-210ENST00000489333 HECW2Q9P2P5 1572 aa12.65□□□□□ -0.38
GABRE-210ENST00000489333 HNRNPUL2Q1KMD3 747 aaKnown RBP12.65□□□□□ -0.38
GABRE-210ENST00000489333 CCNB3Q8WWL7 1395 aa12.65□□□□□ -0.38
GABRE-210ENST00000489333 ACIN1Q9UKV3 1341 aaKnown RBP12.62□□□□□ -0.39
GABRE-210ENST00000489333 FHOD3Q2V2M9 1422 aa12.62□□□□□ -0.39
GABRE-210ENST00000489333 ARAP3Q8WWN8 1544 aa12.62□□□□□ -0.39
GABRE-210ENST00000489333 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.62□□□□□ -0.39
GABRE-210ENST00000489333 NUP153P49790 1475 aaKnown RBP12.6□□□□□ -0.39
GABRE-210ENST00000489333 FYCO1Q9BQS8 1478 aa12.6□□□□□ -0.39
GABRE-210ENST00000489333 U3KPZ7 1027 aaPredicted RBP12.6□□□□□ -0.39
GABRE-210ENST00000489333 DHX57Q6P158 1386 aaKnown RBP12.58□□□□□ -0.4
GABRE-210ENST00000489333 C1QBPQ07021 282 aaKnown RBP12.58□□□□□ -0.4
GABRE-210ENST00000489333 LRRC9Q6ZRR7 1453 aa12.58□□□□□ -0.4
GABRE-210ENST00000489333 FMN1Q68DA7 1419 aa12.57□□□□□ -0.4
GABRE-210ENST00000489333 RAPGEF3O95398 923 aa12.57□□□□□ -0.4
GABRE-210ENST00000489333 TIMELESSQ9UNS1 1208 aa12.57□□□□□ -0.4
GABRE-210ENST00000489333 NEO1Q92859 1461 aa12.57□□□□□ -0.4
GABRE-210ENST00000489333 PHLDB1Q86UU1 1377 aa12.56□□□□□ -0.4
GABRE-210ENST00000489333 FRMPD1Q5SYB0 1578 aa12.56□□□□□ -0.4
GABRE-210ENST00000489333 ILDR1Q86SU0 546 aaPredicted RBP12.56□□□□□ -0.4
GABRE-210ENST00000489333 ADAMTSL3P82987 1691 aa12.54□□□□□ -0.4
GABRE-210ENST00000489333 CASKIN1Q8WXD9 1431 aa12.54□□□□□ -0.4
GABRE-210ENST00000489333 TTC37Q6PGP7 1564 aa12.53□□□□□ -0.4
GABRE-210ENST00000489333 PLEKHD1A6NEE1 506 aa12.53□□□□□ -0.4
GABRE-210ENST00000489333 KANK4Q5T7N3 995 aaPredicted RBP12.53□□□□□ -0.4
GABRE-210ENST00000489333 BCORL1Q5H9F3 1711 aa12.53□□□□□ -0.4
GABRE-210ENST00000489333 RICTORQ6R327 1708 aa12.53□□□□□ -0.4
GABRE-210ENST00000489333 CFAP74Q9C0B2 1584 aa12.52□□□□□ -0.4
GABRE-210ENST00000489333 ARID4BQ4LE39 1312 aaPredicted RBP12.52□□□□□ -0.41
GABRE-210ENST00000489333 CDK13Q14004 1512 aaKnown RBP12.52□□□□□ -0.41
GABRE-210ENST00000489333 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.52□□□□□ -0.41
GABRE-210ENST00000489333 MADDQ8WXG6 1647 aa12.51□□□□□ -0.41
GABRE-210ENST00000489333 ARHGEF40Q8TER5 1519 aa12.51□□□□□ -0.41
GABRE-210ENST00000489333 CACNB1Q02641 598 aaPredicted RBP12.5□□□□□ -0.41
GABRE-210ENST00000489333 FANCAO15360 1455 aa12.5□□□□□ -0.41
GABRE-210ENST00000489333 PTPRMP28827 1452 aa12.5□□□□□ -0.41
GABRE-210ENST00000489333 RIMS1Q86UR5 1692 aaKnown RBP12.49□□□□□ -0.41
GABRE-210ENST00000489333 PCF11O94913 1555 aaKnown RBP12.49□□□□□ -0.41
GABRE-210ENST00000489333 DENND4BO75064 1496 aaPredicted RBP12.49□□□□□ -0.41
GABRE-210ENST00000489333 AKNAQ7Z591 1439 aa12.49□□□□□ -0.41
GABRE-210ENST00000489333 SETD5Q9C0A6 1442 aa12.49□□□□□ -0.41
GABRE-210ENST00000489333 ZBTB22O15209 634 aa12.49□□□□□ -0.41
GABRE-210ENST00000489333 ATP1B4Q9UN42 357 aaPredicted RBP12.48□□□□□ -0.41
GABRE-210ENST00000489333 HECW1Q76N89 1606 aa12.47□□□□□ -0.41
GABRE-210ENST00000489333 MYO5CQ9NQX4 1742 aa12.45□□□□□ -0.42
GABRE-210ENST00000489333 ZFYVE16Q7Z3T8 1539 aa12.45□□□□□ -0.42
GABRE-210ENST00000489333 SIGLEC1Q9BZZ2 1709 aa12.45□□□□□ -0.42
GABRE-210ENST00000489333 ZMYM4Q5VZL5 1548 aa12.44□□□□□ -0.42
GABRE-210ENST00000489333 NEUROD1Q13562 356 aa12.44□□□□□ -0.42
GABRE-210ENST00000489333 FOXD4L1Q9NU39 408 aa12.44□□□□□ -0.42
GABRE-210ENST00000489333 RAB3GAP2Q9H2M9 1393 aa12.43□□□□□ -0.42
GABRE-210ENST00000489333 CCDC18Q5T9S5 1454 aa12.43□□□□□ -0.42
GABRE-210ENST00000489333 KIF14Q15058 1648 aa12.43□□□□□ -0.42
GABRE-210ENST00000489333 LRRIQ1Q96JM4 1722 aa12.42□□□□□ -0.42
GABRE-210ENST00000489333 FER1L4A9Z1Z3 1794 aa12.42□□□□□ -0.42
GABRE-210ENST00000489333 YEATS2Q9ULM3 1422 aa12.42□□□□□ -0.42
GABRE-210ENST00000489333 PLCH2O75038 1416 aa12.4□□□□□ -0.42
GABRE-210ENST00000489333 POGZQ7Z3K3 1410 aa12.4□□□□□ -0.42
GABRE-210ENST00000489333 SCAPERQ9BY12 1400 aa12.4□□□□□ -0.42
GABRE-210ENST00000489333 EHBP1L1Q8N3D4 1523 aa12.4□□□□□ -0.42
GABRE-210ENST00000489333 SUPT6HQ7KZ85 1726 aaKnown RBP12.4□□□□□ -0.43
GABRE-210ENST00000489333 MLECQ14165 292 aa12.39□□□□□ -0.43
GABRE-210ENST00000489333 MAGI2Q86UL8 1455 aa12.39□□□□□ -0.43
GABRE-210ENST00000489333 LMTK3Q96Q04 1460 aa12.39□□□□□ -0.43
GABRE-210ENST00000489333 CDK11AQ9UQ88 783 aaPredicted RBP12.38□□□□□ -0.43
GABRE-210ENST00000489333 ARHGAP5Q13017 1502 aa12.37□□□□□ -0.43
GABRE-210ENST00000489333 FGD6Q6ZV73 1430 aa12.37□□□□□ -0.43
GABRE-210ENST00000489333 MTUS2Q5JR59 1369 aa12.36□□□□□ -0.43
GABRE-210ENST00000489333 EFCAB2Q5VUJ9 269 aa12.36□□□□□ -0.43
GABRE-210ENST00000489333 MIER1Q8N108 512 aa12.36□□□□□ -0.43
GABRE-210ENST00000489333 GTF3C3Q9Y5Q9 886 aa12.36□□□□□ -0.43
GABRE-210ENST00000489333 TROQ12816 1431 aaPredicted RBP12.36□□□□□ -0.43
GABRE-210ENST00000489333 CDC42BPBQ9Y5S2 1711 aa12.35□□□□□ -0.43
GABRE-210ENST00000489333 MYCNP04198 464 aaPredicted RBP12.35□□□□□ -0.43
GABRE-210ENST00000489333 HSPA2P54652 639 aa12.34□□□□□ -0.43
GABRE-210ENST00000489333 HFM1A2PYH4 1435 aa12.34□□□□□ -0.43
GABRE-210ENST00000489333 C9orf84Q5VXU9 1444 aa12.34□□□□□ -0.43
GABRE-210ENST00000489333 ATP10AO60312 1499 aa12.34□□□□□ -0.43
GABRE-210ENST00000489333 FAM50AQ14320 339 aaKnown RBP12.33□□□□□ -0.44
GABRE-210ENST00000489333 MYT1LQ9UL68 1186 aa12.33□□□□□ -0.44
GABRE-210ENST00000489333 MYOM3Q5VTT5 1437 aa12.33□□□□□ -0.44
GABRE-210ENST00000489333 PREX2Q70Z35 1606 aa12.32□□□□□ -0.44
GABRE-210ENST00000489333 ZNF518AQ6AHZ1 1483 aa12.32□□□□□ -0.44
GABRE-210ENST00000489333 ARHGEF12Q9NZN5 1544 aa12.32□□□□□ -0.44
GABRE-210ENST00000489333 FBXO41Q8TF61 875 aa12.31□□□□□ -0.44
GABRE-210ENST00000489333 KDM5CP41229 1560 aa12.3□□□□□ -0.44
GABRE-210ENST00000489333 MIA2Q96PC5 1412 aa12.3□□□□□ -0.44
GABRE-210ENST00000489333 PREX1Q8TCU6 1659 aa12.3□□□□□ -0.44
GABRE-210ENST00000489333 ITSN2Q9NZM3 1697 aa12.3□□□□□ -0.44
GABRE-210ENST00000489333 AFAP1Q8N556 730 aa12.3□□□□□ -0.44
GABRE-210ENST00000489333 SPINK5Q9NQ38 1064 aaPredicted RBP12.3□□□□□ -0.44
GABRE-210ENST00000489333 CDC42BPAQ5VT25 1732 aa12.3□□□□□ -0.44
GABRE-210ENST00000489333 TCOF1Q13428 1488 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms