RNA–Protein interactions for RNA: ENST00000489071.5

ERGIC3-218, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-218ENST00000489071 TTC37Q6PGP7 1564 aa13.78□□□□□ -0.2
ERGIC3-218ENST00000489071 HECW1Q76N89 1606 aa13.78□□□□□ -0.2
ERGIC3-218ENST00000489071 BCORL1Q5H9F3 1711 aa13.77□□□□□ -0.21
ERGIC3-218ENST00000489071 ARHGAP35Q9NRY4 1499 aa13.77□□□□□ -0.21
ERGIC3-218ENST00000489071 PTPRMP28827 1452 aa13.76□□□□□ -0.21
ERGIC3-218ENST00000489071 ARHGEF40Q8TER5 1519 aa13.75□□□□□ -0.21
ERGIC3-218ENST00000489071 PLCH2O75038 1416 aa13.74□□□□□ -0.21
ERGIC3-218ENST00000489071 ILDR1Q86SU0 546 aaPredicted RBP13.74□□□□□ -0.21
ERGIC3-218ENST00000489071 ZMYM4Q5VZL5 1548 aa13.74□□□□□ -0.21
ERGIC3-218ENST00000489071 MAGI2Q86UL8 1455 aa13.74□□□□□ -0.21
ERGIC3-218ENST00000489071 MYO5CQ9NQX4 1742 aa13.73□□□□□ -0.21
ERGIC3-218ENST00000489071 POGZQ7Z3K3 1410 aa13.73□□□□□ -0.21
ERGIC3-218ENST00000489071 MADDQ8WXG6 1647 aa13.72□□□□□ -0.21
ERGIC3-218ENST00000489071 EFCAB2Q5VUJ9 269 aa13.72□□□□□ -0.21
ERGIC3-218ENST00000489071 SCAPERQ9BY12 1400 aa13.72□□□□□ -0.21
ERGIC3-218ENST00000489071 ZFYVE16Q7Z3T8 1539 aa13.71□□□□□ -0.21
ERGIC3-218ENST00000489071 CLIP1P30622 1438 aa13.7□□□□□ -0.22
ERGIC3-218ENST00000489071 KIF14Q15058 1648 aa13.69□□□□□ -0.22
ERGIC3-218ENST00000489071 LOC105371045A0A1W2PR82 267 aa13.69□□□□□ -0.22
ERGIC3-218ENST00000489071 MAPK8IP2Q13387 824 aaPredicted RBP13.69□□□□□ -0.22
ERGIC3-218ENST00000489071 TROQ12816 1431 aaPredicted RBP13.69□□□□□ -0.22
ERGIC3-218ENST00000489071 RIMS1Q86UR5 1692 aaKnown RBP13.69□□□□□ -0.22
ERGIC3-218ENST00000489071 YEATS2Q9ULM3 1422 aa13.68□□□□□ -0.22
ERGIC3-218ENST00000489071 LRRIQ1Q96JM4 1722 aa13.66□□□□□ -0.22
ERGIC3-218ENST00000489071 ATP10AO60312 1499 aa13.65□□□□□ -0.22
ERGIC3-218ENST00000489071 PCF11O94913 1555 aaKnown RBP13.65□□□□□ -0.22
ERGIC3-218ENST00000489071 ARHGAP5Q13017 1502 aa13.64□□□□□ -0.23
ERGIC3-218ENST00000489071 CCDC18Q5T9S5 1454 aa13.64□□□□□ -0.23
ERGIC3-218ENST00000489071 CASKIN1Q8WXD9 1431 aa13.64□□□□□ -0.23
ERGIC3-218ENST00000489071 ZNF518AQ6AHZ1 1483 aa13.63□□□□□ -0.23
ERGIC3-218ENST00000489071 MLECQ14165 292 aa13.63□□□□□ -0.23
ERGIC3-218ENST00000489071 C9orf84Q5VXU9 1444 aa13.63□□□□□ -0.23
ERGIC3-218ENST00000489071 FER1L4A9Z1Z3 1794 aa13.63□□□□□ -0.23
ERGIC3-218ENST00000489071 SIGLEC1Q9BZZ2 1709 aa13.62□□□□□ -0.23
ERGIC3-218ENST00000489071 CDC42BPBQ9Y5S2 1711 aa13.61□□□□□ -0.23
ERGIC3-218ENST00000489071 LMTK3Q96Q04 1460 aa13.61□□□□□ -0.23
ERGIC3-218ENST00000489071 MYT1LQ9UL68 1186 aa13.61□□□□□ -0.23
ERGIC3-218ENST00000489071 AFAP1Q8N556 730 aa13.6□□□□□ -0.23
ERGIC3-218ENST00000489071 KDM5CP41229 1560 aa13.59□□□□□ -0.23
ERGIC3-218ENST00000489071 SETD1BQ9UPS6 1966 aaKnown RBP13.58□□□□□ -0.24
ERGIC3-218ENST00000489071 PREX2Q70Z35 1606 aa13.58□□□□□ -0.24
ERGIC3-218ENST00000489071 FYCO1Q9BQS8 1478 aa13.58□□□□□ -0.24
ERGIC3-218ENST00000489071 ARHGEF12Q9NZN5 1544 aa13.58□□□□□ -0.24
ERGIC3-218ENST00000489071 FBXO41Q8TF61 875 aa13.56□□□□□ -0.24
ERGIC3-218ENST00000489071 MLH3Q9UHC1 1453 aa13.55□□□□□ -0.24
ERGIC3-218ENST00000489071 CDC42BPAQ5VT25 1732 aa13.55□□□□□ -0.24
ERGIC3-218ENST00000489071 ABCC1P33527 1531 aa13.54□□□□□ -0.24
ERGIC3-218ENST00000489071 REREQ9P2R6 1566 aa13.54□□□□□ -0.24
ERGIC3-218ENST00000489071 ITSN2Q9NZM3 1697 aa13.54□□□□□ -0.24
ERGIC3-218ENST00000489071 HSPA2P54652 639 aa13.54□□□□□ -0.24
ERGIC3-218ENST00000489071 CEP162Q5TB80 1403 aa13.54□□□□□ -0.24
ERGIC3-218ENST00000489071 DIP2CQ9Y2E4 1556 aa13.54□□□□□ -0.24
ERGIC3-218ENST00000489071 RNF216Q9NWF9 866 aaPredicted RBP13.53□□□□□ -0.24
ERGIC3-218ENST00000489071 TRAPPC8Q9Y2L5 1435 aa13.53□□□□□ -0.24
ERGIC3-218ENST00000489071 PREX1Q8TCU6 1659 aa13.51□□□□□ -0.25
ERGIC3-218ENST00000489071 ABCA6Q8N139 1617 aa13.51□□□□□ -0.25
ERGIC3-218ENST00000489071 ESF1Q9H501 851 aaKnown RBP13.51□□□□□ -0.25
ERGIC3-218ENST00000489071 AGLP35573 1532 aa13.5□□□□□ -0.25
ERGIC3-218ENST00000489071 CEBPAP49715 358 aaPredicted RBP13.5□□□□□ -0.25
ERGIC3-218ENST00000489071 ZNF777Q9ULD5 760 aaPredicted RBP13.5□□□□□ -0.25
ERGIC3-218ENST00000489071 KIDINS220Q9ULH0 1771 aa13.49□□□□□ -0.25
ERGIC3-218ENST00000489071 GPATCH8Q9UKJ3 1502 aaKnown RBP13.49□□□□□ -0.25
ERGIC3-218ENST00000489071 MTUS2Q5JR59 1369 aa13.47□□□□□ -0.25
ERGIC3-218ENST00000489071 SAMD9LQ8IVG5 1584 aa13.47□□□□□ -0.25
ERGIC3-218ENST00000489071 CFDP1Q9UEE9 299 aaPredicted RBP13.47□□□□□ -0.25
ERGIC3-218ENST00000489071 PLEKHH2Q8IVE3 1493 aa13.47□□□□□ -0.25
ERGIC3-218ENST00000489071 UHRF1BP1Q6BDS2 1440 aa13.47□□□□□ -0.25
ERGIC3-218ENST00000489071 CCNB3Q8WWL7 1395 aa13.46□□□□□ -0.25
ERGIC3-218ENST00000489071 SPAG9O60271 1321 aaKnown RBP13.46□□□□□ -0.25
ERGIC3-218ENST00000489071 DMRT2Q9Y5R5 561 aa13.46□□□□□ -0.25
ERGIC3-218ENST00000489071 CNTLNQ9NXG0 1405 aa13.46□□□□□ -0.26
ERGIC3-218ENST00000489071 KIAA1107Q9UPP5 1409 aa13.46□□□□□ -0.26
ERGIC3-218ENST00000489071 SYCP2Q9BX26 1530 aa13.45□□□□□ -0.26
ERGIC3-218ENST00000489071 C3P01024 1663 aa13.45□□□□□ -0.26
ERGIC3-218ENST00000489071 HNRNPMP52272 730 aaKnown RBP eCLIP13.45□□□□□ -0.26
ERGIC3-218ENST00000489071 CERKQ8TCT0 537 aa13.42□□□□□ -0.26
ERGIC3-218ENST00000489071 STRCQ7RTU9 1775 aa13.41□□□□□ -0.26
ERGIC3-218ENST00000489071 ATP7AQ04656 1500 aa13.41□□□□□ -0.26
ERGIC3-218ENST00000489071 SUPT6HQ7KZ85 1726 aaKnown RBP13.41□□□□□ -0.26
ERGIC3-218ENST00000489071 EHBP1L1Q8N3D4 1523 aa13.4□□□□□ -0.26
ERGIC3-218ENST00000489071 MROH2AA6NES4 1674 aa13.4□□□□□ -0.26
ERGIC3-218ENST00000489071 INO80Q9ULG1 1556 aaPredicted RBP13.38□□□□□ -0.27
ERGIC3-218ENST00000489071 A2MP01023 1474 aa13.38□□□□□ -0.27
ERGIC3-218ENST00000489071 VPS8Q8N3P4 1428 aa13.38□□□□□ -0.27
ERGIC3-218ENST00000489071 TIAM1Q13009 1591 aa13.37□□□□□ -0.27
ERGIC3-218ENST00000489071 ZMYM3Q14202 1370 aa13.37□□□□□ -0.27
ERGIC3-218ENST00000489071 NPATQ14207 1427 aa13.37□□□□□ -0.27
ERGIC3-218ENST00000489071 ADGBQ8N7X0 1667 aa13.37□□□□□ -0.27
ERGIC3-218ENST00000489071 PTPRTO14522 1441 aa13.36□□□□□ -0.27
ERGIC3-218ENST00000489071 PLXNC1O60486 1568 aa13.36□□□□□ -0.27
ERGIC3-218ENST00000489071 GGT6Q6P531 493 aa13.35□□□□□ -0.27
ERGIC3-218ENST00000489071 ZNF644Q9H582 1327 aaPredicted RBP13.35□□□□□ -0.27
ERGIC3-218ENST00000489071 CLTCQ00610 1675 aaKnown RBP13.34□□□□□ -0.27
ERGIC3-218ENST00000489071 RTEL1-TNFRSF6BF6WH68 1400 aa13.34□□□□□ -0.27
ERGIC3-218ENST00000489071 HOXD11P31277 338 aaPredicted RBP13.34□□□□□ -0.27
ERGIC3-218ENST00000489071 RSPH4AQ5TD94 716 aa13.34□□□□□ -0.27
ERGIC3-218ENST00000489071 MBD5Q9P267 1494 aa13.34□□□□□ -0.27
ERGIC3-218ENST00000489071 NCOA1Q15788 1441 aa13.31□□□□□ -0.28
ERGIC3-218ENST00000489071 NCOA2Q15596 1464 aa13.31□□□□□ -0.28
ERGIC3-218ENST00000489071 ZBTB22O15209 634 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 151.3 ms