RNA–Protein interactions for RNA: ENST00000488655.5

LRMDA-204, Transcript of leucine rich melanocyte differentiation associated, humanhuman

TSL 2

Gene LRMDA, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-204ENST00000488655 RNF39Q9H2S5 420 aa12.16□□□□□ -0.46
LRMDA-204ENST00000488655 FYCO1Q9BQS8 1478 aa12.14□□□□□ -0.47
LRMDA-204ENST00000488655 CASKIN1Q8WXD9 1431 aa12.14□□□□□ -0.47
LRMDA-204ENST00000488655 CACNB1Q02641 598 aaPredicted RBP12.14□□□□□ -0.47
LRMDA-204ENST00000488655 CDK13Q14004 1512 aaKnown RBP12.13□□□□□ -0.47
LRMDA-204ENST00000488655 LOC105371045A0A1W2PR82 267 aa12.12□□□□□ -0.47
LRMDA-204ENST00000488655 MKRN4PQ13434 485 aaPredicted RBP12.12□□□□□ -0.47
LRMDA-204ENST00000488655 CCDC18Q5T9S5 1454 aa12.1□□□□□ -0.47
LRMDA-204ENST00000488655 MYO5CQ9NQX4 1742 aa12.09□□□□□ -0.47
LRMDA-204ENST00000488655 CAPN15O75808 1086 aa12.09□□□□□ -0.47
LRMDA-204ENST00000488655 FAM69CQ0P6D2 419 aa12.09□□□□□ -0.47
LRMDA-204ENST00000488655 MAGI3Q5TCQ9 1506 aa12.08□□□□□ -0.48
LRMDA-204ENST00000488655 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.08□□□□□ -0.48
LRMDA-204ENST00000488655 TTC37Q6PGP7 1564 aa12.08□□□□□ -0.48
LRMDA-204ENST00000488655 KIF14Q15058 1648 aa12.08□□□□□ -0.48
LRMDA-204ENST00000488655 POLA2Q14181 598 aa12.07□□□□□ -0.48
LRMDA-204ENST00000488655 CDC42BPBQ9Y5S2 1711 aa12.06□□□□□ -0.48
LRMDA-204ENST00000488655 CDC42BPAQ5VT25 1732 aa12.06□□□□□ -0.48
LRMDA-204ENST00000488655 SPDYE4A6NLX3 237 aa12.05□□□□□ -0.48
LRMDA-204ENST00000488655 KDM6BO15054 1643 aa12.04□□□□□ -0.48
LRMDA-204ENST00000488655 VPS8Q8N3P4 1428 aa12.04□□□□□ -0.48
LRMDA-204ENST00000488655 TEX14Q8IWB6 1497 aa12.04□□□□□ -0.48
LRMDA-204ENST00000488655 CFAP74Q9C0B2 1584 aa12.04□□□□□ -0.48
LRMDA-204ENST00000488655 ARID3CA6NKF2 412 aa12.03□□□□□ -0.48
LRMDA-204ENST00000488655 TROQ12816 1431 aaPredicted RBP12.03□□□□□ -0.48
LRMDA-204ENST00000488655 CD109Q6YHK3 1445 aa12.03□□□□□ -0.48
LRMDA-204ENST00000488655 ARAP3Q8WWN8 1544 aa12.02□□□□□ -0.48
LRMDA-204ENST00000488655 TIAM1Q13009 1591 aa12.02□□□□□ -0.49
LRMDA-204ENST00000488655 PREX2Q70Z35 1606 aa12.02□□□□□ -0.49
LRMDA-204ENST00000488655 PLEKHD1A6NEE1 506 aa12.02□□□□□ -0.49
LRMDA-204ENST00000488655 MAP3K1Q13233 1512 aa12.01□□□□□ -0.49
LRMDA-204ENST00000488655 C1QBPQ07021 282 aaKnown RBP12.01□□□□□ -0.49
LRMDA-204ENST00000488655 RICTORQ6R327 1708 aa12□□□□□ -0.49
LRMDA-204ENST00000488655 KCNH8Q96L42 1107 aa11.99□□□□□ -0.49
LRMDA-204ENST00000488655 EHBP1L1Q8N3D4 1523 aa11.99□□□□□ -0.49
LRMDA-204ENST00000488655 NEO1Q92859 1461 aa11.98□□□□□ -0.49
LRMDA-204ENST00000488655 SUPT6HQ7KZ85 1726 aaKnown RBP11.97□□□□□ -0.49
LRMDA-204ENST00000488655 ITSN2Q9NZM3 1697 aa11.97□□□□□ -0.49
LRMDA-204ENST00000488655 COL17A1Q9UMD9 1497 aaPredicted RBP11.97□□□□□ -0.49
LRMDA-204ENST00000488655 CDK11AQ9UQ88 783 aaPredicted RBP11.97□□□□□ -0.49
LRMDA-204ENST00000488655 FRMPD1Q5SYB0 1578 aa11.96□□□□□ -0.5
LRMDA-204ENST00000488655 PLCH2O75038 1416 aa11.95□□□□□ -0.5
LRMDA-204ENST00000488655 PHLDB1Q86UU1 1377 aa11.95□□□□□ -0.5
LRMDA-204ENST00000488655 ABCB7O75027 752 aa11.95□□□□□ -0.5
LRMDA-204ENST00000488655 ATP1B4Q9UN42 357 aaPredicted RBP11.95□□□□□ -0.5
LRMDA-204ENST00000488655 FANCAO15360 1455 aa11.93□□□□□ -0.5
LRMDA-204ENST00000488655 LRRC9Q6ZRR7 1453 aa11.91□□□□□ -0.5
LRMDA-204ENST00000488655 AKNAQ7Z591 1439 aa11.9□□□□□ -0.5
LRMDA-204ENST00000488655 SAMD9LQ8IVG5 1584 aa11.9□□□□□ -0.5
LRMDA-204ENST00000488655 FBXO3Q9UK99 471 aa11.9□□□□□ -0.5
LRMDA-204ENST00000488655 ABCC1P33527 1531 aa11.9□□□□□ -0.5
LRMDA-204ENST00000488655 ZMYM4Q5VZL5 1548 aa11.9□□□□□ -0.5
LRMDA-204ENST00000488655 GPATCH8Q9UKJ3 1502 aaKnown RBP11.9□□□□□ -0.5
LRMDA-204ENST00000488655 PROM2Q8N271 834 aa11.89□□□□□ -0.51
LRMDA-204ENST00000488655 ARHGAP5Q13017 1502 aa11.89□□□□□ -0.51
LRMDA-204ENST00000488655 MTUS2Q5JR59 1369 aa11.89□□□□□ -0.51
LRMDA-204ENST00000488655 KDM5CP41229 1560 aa11.88□□□□□ -0.51
LRMDA-204ENST00000488655 NCOA2Q15596 1464 aa11.87□□□□□ -0.51
LRMDA-204ENST00000488655 ADGRL1O94910 1474 aa11.86□□□□□ -0.51
LRMDA-204ENST00000488655 DENND4BO75064 1496 aaPredicted RBP11.85□□□□□ -0.51
LRMDA-204ENST00000488655 SIGLEC1Q9BZZ2 1709 aa11.84□□□□□ -0.51
LRMDA-204ENST00000488655 ARHGEF12Q9NZN5 1544 aa11.84□□□□□ -0.51
LRMDA-204ENST00000488655 KIDINS220Q9ULH0 1771 aa11.84□□□□□ -0.51
LRMDA-204ENST00000488655 POGZQ7Z3K3 1410 aa11.84□□□□□ -0.51
LRMDA-204ENST00000488655 ARHGEF40Q8TER5 1519 aa11.83□□□□□ -0.52
LRMDA-204ENST00000488655 HECW2Q9P2P5 1572 aa11.83□□□□□ -0.52
LRMDA-204ENST00000488655 KANK4Q5T7N3 995 aaPredicted RBP11.82□□□□□ -0.52
LRMDA-204ENST00000488655 EFCAB2Q5VUJ9 269 aa11.82□□□□□ -0.52
LRMDA-204ENST00000488655 ZNF518AQ6AHZ1 1483 aa11.82□□□□□ -0.52
LRMDA-204ENST00000488655 MAGI2Q86UL8 1455 aa11.82□□□□□ -0.52
LRMDA-204ENST00000488655 SYCP2Q9BX26 1530 aa11.81□□□□□ -0.52
LRMDA-204ENST00000488655 CCNB3Q8WWL7 1395 aa11.81□□□□□ -0.52
LRMDA-204ENST00000488655 INO80Q9ULG1 1556 aaPredicted RBP11.81□□□□□ -0.52
LRMDA-204ENST00000488655 SCAPERQ9BY12 1400 aa11.81□□□□□ -0.52
LRMDA-204ENST00000488655 ZBTB12Q9Y330 459 aaPredicted RBP11.81□□□□□ -0.52
LRMDA-204ENST00000488655 CROCC2H7BZ55 1655 aa11.81□□□□□ -0.52
LRMDA-204ENST00000488655 KIAA1107Q9UPP5 1409 aa11.8□□□□□ -0.52
LRMDA-204ENST00000488655 PLEKHH2Q8IVE3 1493 aa11.8□□□□□ -0.52
LRMDA-204ENST00000488655 ARHGEF5Q12774 1597 aa11.79□□□□□ -0.52
LRMDA-204ENST00000488655 REREQ9P2R6 1566 aa11.79□□□□□ -0.52
LRMDA-204ENST00000488655 ABCA6Q8N139 1617 aa11.79□□□□□ -0.52
LRMDA-204ENST00000488655 ZFYVE16Q7Z3T8 1539 aa11.79□□□□□ -0.52
LRMDA-204ENST00000488655 ADGBQ8N7X0 1667 aa11.78□□□□□ -0.52
LRMDA-204ENST00000488655 MLH3Q9UHC1 1453 aa11.78□□□□□ -0.52
LRMDA-204ENST00000488655 RAPGEF3O95398 923 aa11.78□□□□□ -0.52
LRMDA-204ENST00000488655 DIP2CQ9Y2E4 1556 aa11.78□□□□□ -0.52
LRMDA-204ENST00000488655 MYOM3Q5VTT5 1437 aa11.77□□□□□ -0.52
LRMDA-204ENST00000488655 MIA2Q96PC5 1412 aa11.77□□□□□ -0.52
LRMDA-204ENST00000488655 BCORL1Q5H9F3 1711 aa11.77□□□□□ -0.52
LRMDA-204ENST00000488655 CAMSAP2Q08AD1 1489 aa11.77□□□□□ -0.52
LRMDA-204ENST00000488655 MBD5Q9P267 1494 aa11.77□□□□□ -0.52
LRMDA-204ENST00000488655 VASPP50552 380 aaPredicted RBP11.77□□□□□ -0.53
LRMDA-204ENST00000488655 PTPN23Q9H3S7 1636 aa11.77□□□□□ -0.53
LRMDA-204ENST00000488655 TRAPPC8Q9Y2L5 1435 aa11.77□□□□□ -0.53
LRMDA-204ENST00000488655 ADAMTSL3P82987 1691 aa11.76□□□□□ -0.53
LRMDA-204ENST00000488655 DSG3P32926 999 aa11.76□□□□□ -0.53
LRMDA-204ENST00000488655 MAST1Q9Y2H9 1570 aa11.75□□□□□ -0.53
LRMDA-204ENST00000488655 CFDP1Q9UEE9 299 aaPredicted RBP11.75□□□□□ -0.53
LRMDA-204ENST00000488655 TCOF1Q13428 1488 aaKnown RBP11.75□□□□□ -0.53
LRMDA-204ENST00000488655 YEATS2Q9ULM3 1422 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms