RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-208ENST00000488571 CFAP74Q9C0B2 1584 aa19.08■□□□□ 0.65
SNU13-208ENST00000488571 FANCAO15360 1455 aa19.08■□□□□ 0.64
SNU13-208ENST00000488571 CDK13Q14004 1512 aaKnown RBP19.05■□□□□ 0.64
SNU13-208ENST00000488571 ZMYM4Q5VZL5 1548 aa19.05■□□□□ 0.64
SNU13-208ENST00000488571 ARID4BQ4LE39 1312 aaPredicted RBP19.05■□□□□ 0.64
SNU13-208ENST00000488571 SIGLEC1Q9BZZ2 1709 aa19.05■□□□□ 0.64
SNU13-208ENST00000488571 PCF11O94913 1555 aaKnown RBP19.04■□□□□ 0.64
SNU13-208ENST00000488571 RIMS1Q86UR5 1692 aaKnown RBP19.04■□□□□ 0.64
SNU13-208ENST00000488571 LMTK3Q96Q04 1460 aa19.03■□□□□ 0.64
SNU13-208ENST00000488571 NPM3O75607 178 aaKnown RBP19.01■□□□□ 0.63
SNU13-208ENST00000488571 YEATS2Q9ULM3 1422 aa19■□□□□ 0.63
SNU13-208ENST00000488571 ZFYVE16Q7Z3T8 1539 aa19■□□□□ 0.63
SNU13-208ENST00000488571 HECW1Q76N89 1606 aa18.98■□□□□ 0.63
SNU13-208ENST00000488571 CACNB1Q02641 598 aaPredicted RBP18.97■□□□□ 0.63
SNU13-208ENST00000488571 PLCH2O75038 1416 aa18.97■□□□□ 0.63
SNU13-208ENST00000488571 MAGI2Q86UL8 1455 aa18.97■□□□□ 0.63
SNU13-208ENST00000488571 FBXO41Q8TF61 875 aa18.96■□□□□ 0.63
SNU13-208ENST00000488571 POGZQ7Z3K3 1410 aa18.95■□□□□ 0.62
SNU13-208ENST00000488571 SCAPERQ9BY12 1400 aa18.94■□□□□ 0.62
SNU13-208ENST00000488571 RNF39Q9H2S5 420 aa18.94■□□□□ 0.62
SNU13-208ENST00000488571 ARHGAP35Q9NRY4 1499 aa18.94■□□□□ 0.62
SNU13-208ENST00000488571 MYO5CQ9NQX4 1742 aa18.92■□□□□ 0.62
SNU13-208ENST00000488571 FMN1Q68DA7 1419 aa18.91■□□□□ 0.62
SNU13-208ENST00000488571 KIF14Q15058 1648 aa18.91■□□□□ 0.62
SNU13-208ENST00000488571 FER1L4A9Z1Z3 1794 aa18.91■□□□□ 0.62
SNU13-208ENST00000488571 EHMT2Q96KQ7 1210 aa18.9■□□□□ 0.62
SNU13-208ENST00000488571 LRRIQ1Q96JM4 1722 aa18.88■□□□□ 0.61
SNU13-208ENST00000488571 UBTFP17480 764 aaKnown RBP18.88■□□□□ 0.61
SNU13-208ENST00000488571 HSPA2P54652 639 aa18.88■□□□□ 0.61
SNU13-208ENST00000488571 ATP10AO60312 1499 aa18.87■□□□□ 0.61
SNU13-208ENST00000488571 MLECQ14165 292 aa18.87■□□□□ 0.61
SNU13-208ENST00000488571 ARHGEF12Q9NZN5 1544 aa18.87■□□□□ 0.61
SNU13-208ENST00000488571 ATP1B4Q9UN42 357 aaPredicted RBP18.87■□□□□ 0.61
SNU13-208ENST00000488571 EFCAB2Q5VUJ9 269 aa18.86■□□□□ 0.61
SNU13-208ENST00000488571 TROQ12816 1431 aaPredicted RBP18.84■□□□□ 0.61
SNU13-208ENST00000488571 C9orf84Q5VXU9 1444 aa18.84■□□□□ 0.61
SNU13-208ENST00000488571 KCNA4P22459 653 aa18.84■□□□□ 0.61
SNU13-208ENST00000488571 KDM5CP41229 1560 aa18.83■□□□□ 0.6
SNU13-208ENST00000488571 CDK11AQ9UQ88 783 aaPredicted RBP18.82■□□□□ 0.6
SNU13-208ENST00000488571 ZNF518AQ6AHZ1 1483 aa18.82■□□□□ 0.6
SNU13-208ENST00000488571 ARHGAP5Q13017 1502 aa18.81■□□□□ 0.6
SNU13-208ENST00000488571 CDC42BPBQ9Y5S2 1711 aa18.8■□□□□ 0.6
SNU13-208ENST00000488571 PREX1Q8TCU6 1659 aa18.79■□□□□ 0.6
SNU13-208ENST00000488571 CLIP1P30622 1438 aa18.78■□□□□ 0.6
SNU13-208ENST00000488571 AFAP1Q8N556 730 aa18.78■□□□□ 0.6
SNU13-208ENST00000488571 DIP2CQ9Y2E4 1556 aa18.77■□□□□ 0.6
SNU13-208ENST00000488571 PREX2Q70Z35 1606 aa18.75■□□□□ 0.59
SNU13-208ENST00000488571 CEBPAP49715 358 aaPredicted RBP18.75■□□□□ 0.59
SNU13-208ENST00000488571 REREQ9P2R6 1566 aa18.75■□□□□ 0.59
SNU13-208ENST00000488571 ABCA6Q8N139 1617 aa18.74■□□□□ 0.59
SNU13-208ENST00000488571 MLH3Q9UHC1 1453 aa18.72■□□□□ 0.59
SNU13-208ENST00000488571 ABCC1P33527 1531 aa18.72■□□□□ 0.59
SNU13-208ENST00000488571 CASKIN1Q8WXD9 1431 aa18.72■□□□□ 0.59
SNU13-208ENST00000488571 ITSN2Q9NZM3 1697 aa18.71■□□□□ 0.59
SNU13-208ENST00000488571 TRAPPC8Q9Y2L5 1435 aa18.71■□□□□ 0.59
SNU13-208ENST00000488571 CCDC18Q5T9S5 1454 aa18.71■□□□□ 0.59
SNU13-208ENST00000488571 CERKQ8TCT0 537 aa18.7■□□□□ 0.58
SNU13-208ENST00000488571 STRCQ7RTU9 1775 aa18.7■□□□□ 0.58
SNU13-208ENST00000488571 CDC42BPAQ5VT25 1732 aa18.69■□□□□ 0.58
SNU13-208ENST00000488571 C1QBPQ07021 282 aaKnown RBP18.68■□□□□ 0.58
SNU13-208ENST00000488571 C3P01024 1663 aa18.68■□□□□ 0.58
SNU13-208ENST00000488571 AGLP35573 1532 aa18.68■□□□□ 0.58
SNU13-208ENST00000488571 KIDINS220Q9ULH0 1771 aa18.68■□□□□ 0.58
SNU13-208ENST00000488571 UHRF1BP1Q6BDS2 1440 aa18.66■□□□□ 0.58
SNU13-208ENST00000488571 SETD1BQ9UPS6 1966 aaKnown RBP18.66■□□□□ 0.58
SNU13-208ENST00000488571 MYT1LQ9UL68 1186 aa18.66■□□□□ 0.58
SNU13-208ENST00000488571 FYCO1Q9BQS8 1478 aa18.64■□□□□ 0.57
SNU13-208ENST00000488571 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.62■□□□□ 0.57
SNU13-208ENST00000488571 SAMD9LQ8IVG5 1584 aa18.61■□□□□ 0.57
SNU13-208ENST00000488571 SYCP2Q9BX26 1530 aa18.58■□□□□ 0.56
SNU13-208ENST00000488571 GPATCH8Q9UKJ3 1502 aaKnown RBP18.58■□□□□ 0.56
SNU13-208ENST00000488571 CNTLNQ9NXG0 1405 aa18.56■□□□□ 0.56
SNU13-208ENST00000488571 MROH2AA6NES4 1674 aa18.55■□□□□ 0.56
SNU13-208ENST00000488571 PTPRTO14522 1441 aa18.55■□□□□ 0.56
SNU13-208ENST00000488571 ESF1Q9H501 851 aaKnown RBP18.54■□□□□ 0.56
SNU13-208ENST00000488571 ZNF777Q9ULD5 760 aaPredicted RBP18.54■□□□□ 0.56
SNU13-208ENST00000488571 SUPT6HQ7KZ85 1726 aaKnown RBP18.53■□□□□ 0.56
SNU13-208ENST00000488571 INO80Q9ULG1 1556 aaPredicted RBP18.52■□□□□ 0.56
SNU13-208ENST00000488571 HNRNPMP52272 730 aaKnown RBP eCLIP18.52■□□□□ 0.56
SNU13-208ENST00000488571 ATP7AQ04656 1500 aa18.52■□□□□ 0.56
SNU13-208ENST00000488571 PLXNC1O60486 1568 aa18.51■□□□□ 0.55
SNU13-208ENST00000488571 SPAG9O60271 1321 aaKnown RBP18.5■□□□□ 0.55
SNU13-208ENST00000488571 NPATQ14207 1427 aa18.5■□□□□ 0.55
SNU13-208ENST00000488571 NCOA1Q15788 1441 aa18.5■□□□□ 0.55
SNU13-208ENST00000488571 KIAA1107Q9UPP5 1409 aa18.5■□□□□ 0.55
SNU13-208ENST00000488571 LTBP4Q8N2S1 1624 aa18.5■□□□□ 0.55
SNU13-208ENST00000488571 ZMYM3Q14202 1370 aa18.48■□□□□ 0.55
SNU13-208ENST00000488571 CLTCQ00610 1675 aaKnown RBP18.47■□□□□ 0.55
SNU13-208ENST00000488571 PLEKHH2Q8IVE3 1493 aa18.47■□□□□ 0.55
SNU13-208ENST00000488571 CAMSAP1Q5T5Y3 1602 aa18.47■□□□□ 0.55
SNU13-208ENST00000488571 CCNB3Q8WWL7 1395 aa18.46■□□□□ 0.55
SNU13-208ENST00000488571 CFDP1Q9UEE9 299 aaPredicted RBP18.46■□□□□ 0.55
SNU13-208ENST00000488571 A2MP01023 1474 aa18.46■□□□□ 0.54
SNU13-208ENST00000488571 ZNF142P52746 1687 aaPredicted RBP18.44■□□□□ 0.54
SNU13-208ENST00000488571 TIAM1Q13009 1591 aa18.44■□□□□ 0.54
SNU13-208ENST00000488571 MTUS2Q5JR59 1369 aa18.43■□□□□ 0.54
SNU13-208ENST00000488571 MYO3AQ8NEV4 1616 aa18.43■□□□□ 0.54
SNU13-208ENST00000488571 ADGBQ8N7X0 1667 aa18.43■□□□□ 0.54
SNU13-208ENST00000488571 PTPRKQ15262 1439 aa18.41■□□□□ 0.54
SNU13-208ENST00000488571 IQSEC2Q5JU85 1478 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms