RNA–Protein interactions for RNA: ENST00000488535.2

ABCA2-219, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 3,327 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-219ENST00000488535 PBRM1Q86U86 1689 aa17.72■□□□□ 0.43
ABCA2-219ENST00000488535 ADAMTS12P58397 1594 aa17.71■□□□□ 0.43
ABCA2-219ENST00000488535 BRPF3Q9ULD4 1205 aa17.71■□□□□ 0.43
ABCA2-219ENST00000488535 CDK13Q14004 1512 aaKnown RBP17.71■□□□□ 0.43
ABCA2-219ENST00000488535 WASHC2AQ641Q2 1341 aa17.7■□□□□ 0.42
ABCA2-219ENST00000488535 FGD6Q6ZV73 1430 aa17.7■□□□□ 0.42
ABCA2-219ENST00000488535 NCOA2Q15596 1464 aa17.7■□□□□ 0.42
ABCA2-219ENST00000488535 GRIN2AQ12879 1464 aa17.69■□□□□ 0.42
ABCA2-219ENST00000488535 EIF4G3O43432 1585 aaKnown RBP17.69■□□□□ 0.42
ABCA2-219ENST00000488535 FOXD1Q16676 465 aa17.69■□□□□ 0.42
ABCA2-219ENST00000488535 ZNF644Q9H582 1327 aaPredicted RBP17.69■□□□□ 0.42
ABCA2-219ENST00000488535 MAP3K1Q13233 1512 aa17.68■□□□□ 0.42
ABCA2-219ENST00000488535 AKNAQ7Z591 1439 aa17.68■□□□□ 0.42
ABCA2-219ENST00000488535 SLC4A3P48751 1232 aa17.66■□□□□ 0.42
ABCA2-219ENST00000488535 EIF4G2P78344 907 aaKnown RBP eCLIP17.66■□□□□ 0.42
ABCA2-219ENST00000488535 KIAA0586Q9BVV6 1533 aa17.66■□□□□ 0.42
ABCA2-219ENST00000488535 ERICH6BQ5W0A0 696 aa17.65■□□□□ 0.42
ABCA2-219ENST00000488535 ARXQ96QS3 562 aa17.64■□□□□ 0.41
ABCA2-219ENST00000488535 SKAP1Q86WV1 359 aa17.64■□□□□ 0.41
ABCA2-219ENST00000488535 DAXXQ9UER7 740 aaPredicted RBP17.64■□□□□ 0.41
ABCA2-219ENST00000488535 TIMELESSQ9UNS1 1208 aa17.63■□□□□ 0.41
ABCA2-219ENST00000488535 SAMD9Q5K651 1589 aa17.63■□□□□ 0.41
ABCA2-219ENST00000488535 MYOM3Q5VTT5 1437 aa17.62■□□□□ 0.41
ABCA2-219ENST00000488535 EPRSP07814 1512 aaKnown RBP17.62■□□□□ 0.41
ABCA2-219ENST00000488535 CFDP1Q9UEE9 299 aaPredicted RBP17.62■□□□□ 0.41
ABCA2-219ENST00000488535 PRKRIP1Q9H875 184 aaPredicted RBP17.62■□□□□ 0.41
ABCA2-219ENST00000488535 SYNJ2O15056 1496 aa17.6■□□□□ 0.41
ABCA2-219ENST00000488535 PLB1Q6P1J6 1458 aa17.6■□□□□ 0.41
ABCA2-219ENST00000488535 PLEKHD1A6NEE1 506 aa17.6■□□□□ 0.41
ABCA2-219ENST00000488535 C11orf95C9JLR9 678 aaPredicted RBP17.6■□□□□ 0.41
ABCA2-219ENST00000488535 CFAP43Q8NDM7 1665 aa17.6■□□□□ 0.41
ABCA2-219ENST00000488535 PTPRKQ15262 1439 aa17.6■□□□□ 0.41
ABCA2-219ENST00000488535 CARMIL2Q6F5E8 1435 aa17.59■□□□□ 0.41
ABCA2-219ENST00000488535 THOC2Q8NI27 1593 aaKnown RBP17.58■□□□□ 0.41
ABCA2-219ENST00000488535 MAGI1Q96QZ7 1491 aaPredicted RBP17.57■□□□□ 0.4
ABCA2-219ENST00000488535 MAGI3Q5TCQ9 1506 aa17.57■□□□□ 0.4
ABCA2-219ENST00000488535 PRG4Q92954 1404 aaPredicted RBP17.57■□□□□ 0.4
ABCA2-219ENST00000488535 DISP1Q96F81 1524 aa17.56■□□□□ 0.4
ABCA2-219ENST00000488535 ZBED9Q6R2W3 1325 aa17.56■□□□□ 0.4
ABCA2-219ENST00000488535 CCDC18Q5T9S5 1454 aa17.54■□□□□ 0.4
ABCA2-219ENST00000488535 EXOC6Q8TAG9 804 aa17.52■□□□□ 0.4
ABCA2-219ENST00000488535 HECW1Q76N89 1606 aa17.52■□□□□ 0.4
ABCA2-219ENST00000488535 EHBP1L1Q8N3D4 1523 aa17.52■□□□□ 0.39
ABCA2-219ENST00000488535 TMC1Q8TDI8 760 aa17.52■□□□□ 0.39
ABCA2-219ENST00000488535 UGGT2Q9NYU1 1516 aa17.51■□□□□ 0.39
ABCA2-219ENST00000488535 CEP170Q5SW79 1584 aa17.5■□□□□ 0.39
ABCA2-219ENST00000488535 NUP153P49790 1475 aaKnown RBP17.5■□□□□ 0.39
ABCA2-219ENST00000488535 PDE4AP27815 886 aa17.5■□□□□ 0.39
ABCA2-219ENST00000488535 NUDCQ9Y266 331 aa17.5■□□□□ 0.39
ABCA2-219ENST00000488535 SUPT6HQ7KZ85 1726 aaKnown RBP17.49■□□□□ 0.39
ABCA2-219ENST00000488535 L3MBTL2Q969R5 705 aa17.49■□□□□ 0.39
ABCA2-219ENST00000488535 KIAA0556O60303 1618 aa17.49■□□□□ 0.39
ABCA2-219ENST00000488535 PTPRGP23470 1445 aa17.48■□□□□ 0.39
ABCA2-219ENST00000488535 LRRIQ1Q96JM4 1722 aa17.48■□□□□ 0.39
ABCA2-219ENST00000488535 PLIN1O60240 522 aa17.46■□□□□ 0.39
ABCA2-219ENST00000488535 SLC4A1APQ9BWU0 796 aaKnown RBP17.46■□□□□ 0.39
ABCA2-219ENST00000488535 NAIPQ13075 1403 aa17.45■□□□□ 0.38
ABCA2-219ENST00000488535 HNRNPMP52272 730 aaKnown RBP eCLIP17.44■□□□□ 0.38
ABCA2-219ENST00000488535 FRAT1Q92837 279 aaPredicted RBP17.44■□□□□ 0.38
ABCA2-219ENST00000488535 PTPN23Q9H3S7 1636 aa17.43■□□□□ 0.38
ABCA2-219ENST00000488535 PPM1GO15355 546 aaPredicted RBP17.43■□□□□ 0.38
ABCA2-219ENST00000488535 GSE1Q14687 1217 aa17.43■□□□□ 0.38
ABCA2-219ENST00000488535 MPHOSPH9Q99550 1183 aa17.43■□□□□ 0.38
ABCA2-219ENST00000488535 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.42■□□□□ 0.38
ABCA2-219ENST00000488535 HFM1A2PYH4 1435 aa17.42■□□□□ 0.38
ABCA2-219ENST00000488535 NUP160Q12769 1436 aa17.42■□□□□ 0.38
ABCA2-219ENST00000488535 UBE2Q2Q8WVN8 375 aa17.41■□□□□ 0.38
ABCA2-219ENST00000488535 TSPY4P0CV99 314 aa17.4■□□□□ 0.38
ABCA2-219ENST00000488535 TSPY10P0CW01 314 aa17.4■□□□□ 0.38
ABCA2-219ENST00000488535 CNTLNQ9NXG0 1405 aa17.4■□□□□ 0.38
ABCA2-219ENST00000488535 NFKBIBQ15653 356 aa17.39■□□□□ 0.37
ABCA2-219ENST00000488535 TROQ12816 1431 aaPredicted RBP17.38■□□□□ 0.37
ABCA2-219ENST00000488535 RAPGEF6Q8TEU7 1601 aa17.38■□□□□ 0.37
ABCA2-219ENST00000488535 KIF7Q2M1P5 1343 aa17.38■□□□□ 0.37
ABCA2-219ENST00000488535 UACAQ9BZF9 1416 aa17.37■□□□□ 0.37
ABCA2-219ENST00000488535 CCDC7Q96M83 1385 aa17.37■□□□□ 0.37
ABCA2-219ENST00000488535 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.37■□□□□ 0.37
ABCA2-219ENST00000488535 RGS3P49796 1198 aa17.34■□□□□ 0.37
ABCA2-219ENST00000488535 NBPF8Q3BBV2 869 aa17.34■□□□□ 0.37
ABCA2-219ENST00000488535 TCERG1O14776 1098 aaKnown RBP17.34■□□□□ 0.37
ABCA2-219ENST00000488535 MIA2Q96PC5 1412 aa17.34■□□□□ 0.37
ABCA2-219ENST00000488535 ARID4BQ4LE39 1312 aaPredicted RBP17.34■□□□□ 0.37
ABCA2-219ENST00000488535 RCAN3Q9UKA8 241 aa17.33■□□□□ 0.36
ABCA2-219ENST00000488535 USP35Q9P2H5 1018 aa17.32■□□□□ 0.36
ABCA2-219ENST00000488535 ABCC5O15440 1437 aa17.32■□□□□ 0.36
ABCA2-219ENST00000488535 DAPK1P53355 1430 aa17.32■□□□□ 0.36
ABCA2-219ENST00000488535 ATP10BO94823 1461 aa17.32■□□□□ 0.36
ABCA2-219ENST00000488535 BACH2Q9BYV9 841 aa17.32■□□□□ 0.36
ABCA2-219ENST00000488535 RRP1P56182 461 aaKnown RBP17.32■□□□□ 0.36
ABCA2-219ENST00000488535 ARHGEF11O15085 1522 aa17.32■□□□□ 0.36
ABCA2-219ENST00000488535 FRAT2O75474 233 aaPredicted RBP17.31■□□□□ 0.36
ABCA2-219ENST00000488535 KDM2AQ9Y2K7 1162 aa17.3■□□□□ 0.36
ABCA2-219ENST00000488535 CDCA7LQ96GN5 454 aa17.29■□□□□ 0.36
ABCA2-219ENST00000488535 PKD2Q13563 968 aa17.29■□□□□ 0.36
ABCA2-219ENST00000488535 GPATCH8Q9UKJ3 1502 aaKnown RBP17.28■□□□□ 0.36
ABCA2-219ENST00000488535 DDRGK1Q96HY6 314 aa17.27■□□□□ 0.36
ABCA2-219ENST00000488535 SMG6Q86US8 1419 aaKnown RBP17.27■□□□□ 0.35
ABCA2-219ENST00000488535 KIF14Q15058 1648 aa17.26■□□□□ 0.35
ABCA2-219ENST00000488535 CAMSAP2Q08AD1 1489 aa17.25■□□□□ 0.35
ABCA2-219ENST00000488535 TCOF1Q13428 1488 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms