RNA–Protein interactions for RNA: ENST00000488351.1

VEGFD-202, Transcript of vascular endothelial growth factor D, humanhuman

TSL 2

Gene VEGFD, Length 600 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFD-202ENST00000488351 ABCC2Q92887 1545 aa12.73□□□□□ -0.37
VEGFD-202ENST00000488351 ATF5Q9Y2D1 282 aaPredicted RBP12.73□□□□□ -0.37
VEGFD-202ENST00000488351 SAMD1Q6SPF0 538 aaPredicted RBP12.72□□□□□ -0.37
VEGFD-202ENST00000488351 MAGI3Q5TCQ9 1506 aa12.72□□□□□ -0.37
VEGFD-202ENST00000488351 ITSN2Q9NZM3 1697 aa12.71□□□□□ -0.37
VEGFD-202ENST00000488351 FAM50AQ14320 339 aaKnown RBP12.71□□□□□ -0.37
VEGFD-202ENST00000488351 CCER1Q8TC90 406 aaPredicted RBP12.71□□□□□ -0.37
VEGFD-202ENST00000488351 ATP10BO94823 1461 aa12.71□□□□□ -0.38
VEGFD-202ENST00000488351 TCOF1Q13428 1488 aaKnown RBP12.71□□□□□ -0.38
VEGFD-202ENST00000488351 KIF14Q15058 1648 aa12.7□□□□□ -0.38
VEGFD-202ENST00000488351 CLSPNQ9HAW4 1339 aa12.7□□□□□ -0.38
VEGFD-202ENST00000488351 PTPN23Q9H3S7 1636 aa12.69□□□□□ -0.38
VEGFD-202ENST00000488351 KDM5BQ9UGL1 1544 aa12.65□□□□□ -0.38
VEGFD-202ENST00000488351 AKNAQ7Z591 1439 aa12.64□□□□□ -0.39
VEGFD-202ENST00000488351 SETD5Q9C0A6 1442 aa12.64□□□□□ -0.39
VEGFD-202ENST00000488351 ERCC6L2Q5T890 1561 aa12.64□□□□□ -0.39
VEGFD-202ENST00000488351 ARID3CA6NKF2 412 aa12.63□□□□□ -0.39
VEGFD-202ENST00000488351 CFDP1Q9UEE9 299 aaPredicted RBP12.62□□□□□ -0.39
VEGFD-202ENST00000488351 ITGAEP38570 1179 aa12.61□□□□□ -0.39
VEGFD-202ENST00000488351 RSPH4AQ5TD94 716 aa12.61□□□□□ -0.39
VEGFD-202ENST00000488351 GPATCH8Q9UKJ3 1502 aaKnown RBP12.61□□□□□ -0.39
VEGFD-202ENST00000488351 HFM1A2PYH4 1435 aa12.61□□□□□ -0.39
VEGFD-202ENST00000488351 NPM1P06748 294 aaKnown RBP eCLIP12.6□□□□□ -0.39
VEGFD-202ENST00000488351 ABCC10Q5T3U5 1492 aa12.59□□□□□ -0.39
VEGFD-202ENST00000488351 ZCCHC11Q5TAX3 1644 aaKnown RBP12.59□□□□□ -0.39
VEGFD-202ENST00000488351 ROCK1Q13464 1354 aa12.59□□□□□ -0.39
VEGFD-202ENST00000488351 PLEKHH2Q8IVE3 1493 aa12.58□□□□□ -0.4
VEGFD-202ENST00000488351 RAB3GAP2Q9H2M9 1393 aa12.57□□□□□ -0.4
VEGFD-202ENST00000488351 DNMT1P26358 1616 aaKnown RBP12.57□□□□□ -0.4
VEGFD-202ENST00000488351 FKBP8Q14318 412 aa12.56□□□□□ -0.4
VEGFD-202ENST00000488351 CAMSAP2Q08AD1 1489 aa12.56□□□□□ -0.4
VEGFD-202ENST00000488351 DAPK1P53355 1430 aa12.55□□□□□ -0.4
VEGFD-202ENST00000488351 ARAP3Q8WWN8 1544 aa12.55□□□□□ -0.4
VEGFD-202ENST00000488351 PREX2Q70Z35 1606 aa12.55□□□□□ -0.4
VEGFD-202ENST00000488351 CDC42BPAQ5VT25 1732 aa12.54□□□□□ -0.4
VEGFD-202ENST00000488351 SHANK2Q9UPX8 1470 aa12.54□□□□□ -0.4
VEGFD-202ENST00000488351 WDR7Q9Y4E6 1490 aa12.54□□□□□ -0.4
VEGFD-202ENST00000488351 DHX57Q6P158 1386 aaKnown RBP12.53□□□□□ -0.4
VEGFD-202ENST00000488351 ARHGEF5Q12774 1597 aa12.52□□□□□ -0.4
VEGFD-202ENST00000488351 GCC2Q8IWJ2 1684 aa12.52□□□□□ -0.4
VEGFD-202ENST00000488351 MYO5CQ9NQX4 1742 aa12.52□□□□□ -0.41
VEGFD-202ENST00000488351 NAIPQ13075 1403 aa12.52□□□□□ -0.41
VEGFD-202ENST00000488351 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.52□□□□□ -0.41
VEGFD-202ENST00000488351 TSPY4P0CV99 314 aa12.51□□□□□ -0.41
VEGFD-202ENST00000488351 TSPY10P0CW01 314 aa12.51□□□□□ -0.41
VEGFD-202ENST00000488351 ANKRD30AQ9BXX3 1397 aa12.51□□□□□ -0.41
VEGFD-202ENST00000488351 ABCC5O15440 1437 aa12.51□□□□□ -0.41
VEGFD-202ENST00000488351 PLCH2O75038 1416 aa12.51□□□□□ -0.41
VEGFD-202ENST00000488351 KIAA1107Q9UPP5 1409 aa12.51□□□□□ -0.41
VEGFD-202ENST00000488351 ADGRL2O95490 1459 aa12.51□□□□□ -0.41
VEGFD-202ENST00000488351 EFCAB2Q5VUJ9 269 aa12.5□□□□□ -0.41
VEGFD-202ENST00000488351 ARHGAP5Q13017 1502 aa12.5□□□□□ -0.41
VEGFD-202ENST00000488351 ADGBQ8N7X0 1667 aa12.5□□□□□ -0.41
VEGFD-202ENST00000488351 PTPRKQ15262 1439 aa12.49□□□□□ -0.41
VEGFD-202ENST00000488351 ZNF777Q9ULD5 760 aaPredicted RBP12.49□□□□□ -0.41
VEGFD-202ENST00000488351 CROCC2H7BZ55 1655 aa12.48□□□□□ -0.41
VEGFD-202ENST00000488351 TIMELESSQ9UNS1 1208 aa12.48□□□□□ -0.41
VEGFD-202ENST00000488351 CCDC141Q6ZP82 1450 aa12.47□□□□□ -0.41
VEGFD-202ENST00000488351 ZNF219Q9P2Y4 722 aaPredicted RBP12.47□□□□□ -0.41
VEGFD-202ENST00000488351 CDC42BPBQ9Y5S2 1711 aa12.47□□□□□ -0.41
VEGFD-202ENST00000488351 TTC37Q6PGP7 1564 aa12.47□□□□□ -0.41
VEGFD-202ENST00000488351 ASXL2Q76L83 1435 aa12.46□□□□□ -0.41
VEGFD-202ENST00000488351 KCNH8Q96L42 1107 aa12.46□□□□□ -0.41
VEGFD-202ENST00000488351 ABCA9Q8IUA7 1624 aa12.46□□□□□ -0.41
VEGFD-202ENST00000488351 NCOA1Q15788 1441 aa12.45□□□□□ -0.42
VEGFD-202ENST00000488351 C9orf84Q5VXU9 1444 aa12.45□□□□□ -0.42
VEGFD-202ENST00000488351 SAMD9LQ8IVG5 1584 aa12.44□□□□□ -0.42
VEGFD-202ENST00000488351 CFAP74Q9C0B2 1584 aa12.44□□□□□ -0.42
VEGFD-202ENST00000488351 MAST1Q9Y2H9 1570 aa12.44□□□□□ -0.42
VEGFD-202ENST00000488351 ZNF644Q9H582 1327 aaPredicted RBP12.44□□□□□ -0.42
VEGFD-202ENST00000488351 CHIC2Q9UKJ5 165 aa12.44□□□□□ -0.42
VEGFD-202ENST00000488351 MAPKBP1O60336 1514 aa12.43□□□□□ -0.42
VEGFD-202ENST00000488351 MBD5Q9P267 1494 aa12.43□□□□□ -0.42
VEGFD-202ENST00000488351 RRP7BPQ9NSQ0 103 aa12.42□□□□□ -0.42
VEGFD-202ENST00000488351 RIMBP3CA6NJZ7 1639 aa12.4□□□□□ -0.42
VEGFD-202ENST00000488351 RIMBP3BA6NNM3 1639 aa12.4□□□□□ -0.42
VEGFD-202ENST00000488351 RIMBP3Q9UFD9 1639 aa12.4□□□□□ -0.42
VEGFD-202ENST00000488351 ABCC1P33527 1531 aa12.4□□□□□ -0.42
VEGFD-202ENST00000488351 RTEL1-TNFRSF6BF6WH68 1400 aa12.39□□□□□ -0.43
VEGFD-202ENST00000488351 SYCP2Q9BX26 1530 aa12.39□□□□□ -0.43
VEGFD-202ENST00000488351 FANCAO15360 1455 aa12.39□□□□□ -0.43
VEGFD-202ENST00000488351 ANKRD50Q9ULJ7 1429 aa12.38□□□□□ -0.43
VEGFD-202ENST00000488351 HNRNPMP52272 730 aaKnown RBP eCLIP12.38□□□□□ -0.43
VEGFD-202ENST00000488351 TRIM52Q96A61 297 aa12.38□□□□□ -0.43
VEGFD-202ENST00000488351 PLXNC1O60486 1568 aa12.38□□□□□ -0.43
VEGFD-202ENST00000488351 KIF15Q9NS87 1388 aa12.37□□□□□ -0.43
VEGFD-202ENST00000488351 CD109Q6YHK3 1445 aa12.36□□□□□ -0.43
VEGFD-202ENST00000488351 CYB5RLQ6IPT4 315 aa12.35□□□□□ -0.43
VEGFD-202ENST00000488351 GLI2P10070 1586 aa12.35□□□□□ -0.43
VEGFD-202ENST00000488351 NEO1Q92859 1461 aa12.34□□□□□ -0.43
VEGFD-202ENST00000488351 DUOX2Q9NRD8 1548 aa12.34□□□□□ -0.43
VEGFD-202ENST00000488351 RNF39Q9H2S5 420 aa12.34□□□□□ -0.43
VEGFD-202ENST00000488351 ERBINQ96RT1 1412 aa12.34□□□□□ -0.43
VEGFD-202ENST00000488351 ADGRL1O94910 1474 aa12.34□□□□□ -0.43
VEGFD-202ENST00000488351 MPHOSPH9Q99550 1183 aa12.33□□□□□ -0.44
VEGFD-202ENST00000488351 SPAG9O60271 1321 aaKnown RBP12.33□□□□□ -0.44
VEGFD-202ENST00000488351 KDM5DQ9BY66 1539 aa12.32□□□□□ -0.44
VEGFD-202ENST00000488351 ZNF518AQ6AHZ1 1483 aa12.32□□□□□ -0.44
VEGFD-202ENST00000488351 TONSLQ96HA7 1378 aa12.3□□□□□ -0.44
VEGFD-202ENST00000488351 SCAPERQ9BY12 1400 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms