RNA–Protein interactions for RNA: ENST00000488127.1

LDLRAP1-207, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 2

Gene LDLRAP1, Length 4,670 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-207ENST00000488127 FAM69CQ0P6D2 419 aa15.52■□□□□ 0.08
LDLRAP1-207ENST00000488127 WASHC2CQ9Y4E1 1318 aa15.52■□□□□ 0.07
LDLRAP1-207ENST00000488127 ZNF644Q9H582 1327 aaPredicted RBP15.52■□□□□ 0.07
LDLRAP1-207ENST00000488127 CUX1P39880 1505 aa15.51■□□□□ 0.07
LDLRAP1-207ENST00000488127 CDCA8Q53HL2 280 aa15.51■□□□□ 0.07
LDLRAP1-207ENST00000488127 RSPH4AQ5TD94 716 aa15.48■□□□□ 0.07
LDLRAP1-207ENST00000488127 SOX12O15370 315 aa15.48■□□□□ 0.07
LDLRAP1-207ENST00000488127 SRPK2P78362 688 aaKnown RBP15.46■□□□□ 0.07
LDLRAP1-207ENST00000488127 CC2D1BQ5T0F9 858 aaKnown RBP15.46■□□□□ 0.07
LDLRAP1-207ENST00000488127 ARXQ96QS3 562 aa15.46■□□□□ 0.07
LDLRAP1-207ENST00000488127 SUPT16HQ9Y5B9 1047 aaKnown RBP15.46■□□□□ 0.07
LDLRAP1-207ENST00000488127 IFT140Q96RY7 1462 aa15.45■□□□□ 0.06
LDLRAP1-207ENST00000488127 HDGFP51858 240 aaKnown RBP15.45■□□□□ 0.06
LDLRAP1-207ENST00000488127 PRG4Q92954 1404 aaPredicted RBP15.45■□□□□ 0.06
LDLRAP1-207ENST00000488127 NEUROD2Q15784 382 aa15.44■□□□□ 0.06
LDLRAP1-207ENST00000488127 ANP32BQ92688 251 aaKnown RBP15.44■□□□□ 0.06
LDLRAP1-207ENST00000488127 L3MBTL2Q969R5 705 aa15.43■□□□□ 0.06
LDLRAP1-207ENST00000488127 HSPA5P11021 654 aaKnown RBP15.42■□□□□ 0.06
LDLRAP1-207ENST00000488127 TMF1P82094 1093 aa15.42■□□□□ 0.06
LDLRAP1-207ENST00000488127 SNAPC4Q5SXM2 1469 aa15.42■□□□□ 0.06
LDLRAP1-207ENST00000488127 RTN4Q9NQC3 1192 aaKnown RBP15.41■□□□□ 0.06
LDLRAP1-207ENST00000488127 CFAP53Q96M91 514 aa15.39■□□□□ 0.05
LDLRAP1-207ENST00000488127 UNC13AQ9UPW8 1703 aa15.39■□□□□ 0.05
LDLRAP1-207ENST00000488127 AFAP1Q8N556 730 aa15.38■□□□□ 0.05
LDLRAP1-207ENST00000488127 TIMELESSQ9UNS1 1208 aa15.38■□□□□ 0.05
LDLRAP1-207ENST00000488127 TOP2BQ02880 1626 aa15.37■□□□□ 0.05
LDLRAP1-207ENST00000488127 KIF21BO75037 1637 aa15.37■□□□□ 0.05
LDLRAP1-207ENST00000488127 ARAP1Q96P48 1450 aa15.36■□□□□ 0.05
LDLRAP1-207ENST00000488127 PRDM2Q13029 1718 aa15.36■□□□□ 0.05
LDLRAP1-207ENST00000488127 UPF2Q9HAU5 1272 aaKnown RBP15.36■□□□□ 0.05
LDLRAP1-207ENST00000488127 DNMBPQ6XZF7 1577 aa15.35■□□□□ 0.05
LDLRAP1-207ENST00000488127 HSP90AA1P07900 732 aaKnown RBP15.35■□□□□ 0.05
LDLRAP1-207ENST00000488127 PHLDB1Q86UU1 1377 aa15.35■□□□□ 0.05
LDLRAP1-207ENST00000488127 NUTM2FA1L443 756 aa15.35■□□□□ 0.05
LDLRAP1-207ENST00000488127 U2SURPO15042 1029 aaKnown RBP15.35■□□□□ 0.05
LDLRAP1-207ENST00000488127 ROCK2O75116 1388 aaKnown RBP15.34■□□□□ 0.05
LDLRAP1-207ENST00000488127 PRXQ9BXM0 1461 aa15.34■□□□□ 0.05
LDLRAP1-207ENST00000488127 LAMC3Q9Y6N6 1575 aa15.32■□□□□ 0.04
LDLRAP1-207ENST00000488127 LAS1LQ9Y4W2 734 aaKnown RBP15.31■□□□□ 0.04
LDLRAP1-207ENST00000488127 TRAK1Q9UPV9 953 aa15.3■□□□□ 0.04
LDLRAP1-207ENST00000488127 EID1Q9Y6B2 187 aa15.3■□□□□ 0.04
LDLRAP1-207ENST00000488127 PAK3O75914 559 aaPredicted RBP15.29■□□□□ 0.04
LDLRAP1-207ENST00000488127 DEKP35659 375 aaKnown RBP15.28■□□□□ 0.04
LDLRAP1-207ENST00000488127 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.28■□□□□ 0.04
LDLRAP1-207ENST00000488127 RBM19Q9Y4C8 960 aaKnown RBP15.28■□□□□ 0.04
LDLRAP1-207ENST00000488127 FGD6Q6ZV73 1430 aa15.28■□□□□ 0.04
LDLRAP1-207ENST00000488127 NUDCQ9Y266 331 aa15.28■□□□□ 0.04
LDLRAP1-207ENST00000488127 CASKIN1Q8WXD9 1431 aa15.28■□□□□ 0.04
LDLRAP1-207ENST00000488127 MYOM3Q5VTT5 1437 aa15.27■□□□□ 0.04
LDLRAP1-207ENST00000488127 MORC1Q86VD1 984 aa15.27■□□□□ 0.04
LDLRAP1-207ENST00000488127 MAPK8IP3Q9UPT6 1336 aa15.27■□□□□ 0.03
LDLRAP1-207ENST00000488127 URB2Q14146 1524 aaKnown RBP15.27■□□□□ 0.03
LDLRAP1-207ENST00000488127 ZNF608Q9ULD9 1512 aaPredicted RBP15.27■□□□□ 0.03
LDLRAP1-207ENST00000488127 LRRC9Q6ZRR7 1453 aa15.26■□□□□ 0.03
LDLRAP1-207ENST00000488127 NOP58Q9Y2X3 529 aaKnown RBP15.26■□□□□ 0.03
LDLRAP1-207ENST00000488127 KIF15Q9NS87 1388 aa15.26■□□□□ 0.03
LDLRAP1-207ENST00000488127 ERICH3Q5RHP9 1530 aa15.26■□□□□ 0.03
LDLRAP1-207ENST00000488127 DHX57Q6P158 1386 aaKnown RBP15.25■□□□□ 0.03
LDLRAP1-207ENST00000488127 SYNJ2O15056 1496 aa15.25■□□□□ 0.03
LDLRAP1-207ENST00000488127 ABCA10Q8WWZ4 1543 aa15.25■□□□□ 0.03
LDLRAP1-207ENST00000488127 CCDC144AA2RUR9 1427 aa15.25■□□□□ 0.03
LDLRAP1-207ENST00000488127 NCOA2Q15596 1464 aa15.25■□□□□ 0.03
LDLRAP1-207ENST00000488127 RAPGEF3O95398 923 aa15.23■□□□□ 0.03
LDLRAP1-207ENST00000488127 ERICH6BQ5W0A0 696 aa15.22■□□□□ 0.03
LDLRAP1-207ENST00000488127 PEG3Q9GZU2 1588 aa15.22■□□□□ 0.03
LDLRAP1-207ENST00000488127 HDGFL2Q7Z4V5 671 aaPredicted RBP15.22■□□□□ 0.03
LDLRAP1-207ENST00000488127 DDRGK1Q96HY6 314 aa15.22■□□□□ 0.03
LDLRAP1-207ENST00000488127 ST20-MTHFSA0A0A6YYL1 179 aa15.22■□□□□ 0.03
LDLRAP1-207ENST00000488127 TSHZ2Q9NRE2 1034 aa15.22■□□□□ 0.03
LDLRAP1-207ENST00000488127 PPP4R2Q9NY27 417 aa15.2■□□□□ 0.02
LDLRAP1-207ENST00000488127 KIAA0586Q9BVV6 1533 aa15.19■□□□□ 0.02
LDLRAP1-207ENST00000488127 ARHGAP5Q13017 1502 aa15.18■□□□□ 0.02
LDLRAP1-207ENST00000488127 VGFO15240 615 aaPredicted RBP15.17■□□□□ 0.02
LDLRAP1-207ENST00000488127 NGDNQ8NEJ9 315 aaKnown RBP15.16■□□□□ 0.02
LDLRAP1-207ENST00000488127 ANKRD50Q9ULJ7 1429 aa15.16■□□□□ 0.02
LDLRAP1-207ENST00000488127 TRIM44Q96DX7 344 aaPredicted RBP15.16■□□□□ 0.02
LDLRAP1-207ENST00000488127 B4GALNT3Q6L9W6 998 aa15.15■□□□□ 0.02
LDLRAP1-207ENST00000488127 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.15■□□□□ 0.02
LDLRAP1-207ENST00000488127 FYCO1Q9BQS8 1478 aa15.15■□□□□ 0.02
LDLRAP1-207ENST00000488127 FRAT1Q92837 279 aaPredicted RBP15.14■□□□□ 0.01
LDLRAP1-207ENST00000488127 SCAPERQ9BY12 1400 aa15.14■□□□□ 0.01
LDLRAP1-207ENST00000488127 MINK1Q8N4C8 1332 aaPredicted RBP15.13■□□□□ 0.01
LDLRAP1-207ENST00000488127 NAP1L5Q96NT1 182 aaPredicted RBP15.13■□□□□ 0.01
LDLRAP1-207ENST00000488127 U2AF1L5P0DN76 240 aaPredicted RBP15.12■□□□□ 0.01
LDLRAP1-207ENST00000488127 U2AF1Q01081 240 aaKnown RBP eCLIP15.12■□□□□ 0.01
LDLRAP1-207ENST00000488127 TROQ12816 1431 aaPredicted RBP15.12■□□□□ 0.01
LDLRAP1-207ENST00000488127 GRIN2AQ12879 1464 aa15.12■□□□□ 0.01
LDLRAP1-207ENST00000488127 PLB1Q6P1J6 1458 aa15.12■□□□□ 0.01
LDLRAP1-207ENST00000488127 CDK13Q14004 1512 aaKnown RBP15.11■□□□□ 0.01
LDLRAP1-207ENST00000488127 KTN1Q86UP2 1357 aaKnown RBP15.11■□□□□ 0.01
LDLRAP1-207ENST00000488127 UACAQ9BZF9 1416 aa15.11■□□□□ 0.01
LDLRAP1-207ENST00000488127 BECN1Q14457 450 aa15.11■□□□□ 0.01
LDLRAP1-207ENST00000488127 CSB-PGBD3P0DP91 1061 aa15.11■□□□□ 0.01
LDLRAP1-207ENST00000488127 MYH16Q9H6N6 1097 aa15.11■□□□□ 0.01
LDLRAP1-207ENST00000488127 EIF3AQ14152 1382 aaKnown RBP15.11■□□□□ 0.01
LDLRAP1-207ENST00000488127 TERF2IPQ9NYB0 399 aa15.1■□□□□ 0.01
LDLRAP1-207ENST00000488127 EFCAB5A4FU69 1503 aa15.1■□□□□ 0.01
LDLRAP1-207ENST00000488127 FTSJ3Q8IY81 847 aaKnown RBP15.09■□□□□ 0.01
LDLRAP1-207ENST00000488127 TMEM132EQ6IEE7 984 aa15.08■□□□□ 0
LDLRAP1-207ENST00000488127 LTV1Q96GA3 475 aaPredicted RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms