RNA–Protein interactions for RNA: ENST00000488010.5

TMF1-203, Transcript of TATA element modulatory factor 1, humanhuman

TSL 5

Gene TMF1, Length 3,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-203ENST00000488010 PAK3O75914 559 aaPredicted RBP13.61□□□□□ -0.23
TMF1-203ENST00000488010 SLC4A1APQ9BWU0 796 aaKnown RBP13.61□□□□□ -0.23
TMF1-203ENST00000488010 AKNAQ7Z591 1439 aa13.61□□□□□ -0.23
TMF1-203ENST00000488010 MAGI3Q5TCQ9 1506 aa13.6□□□□□ -0.23
TMF1-203ENST00000488010 UGGT2Q9NYU1 1516 aa13.59□□□□□ -0.23
TMF1-203ENST00000488010 HECW1Q76N89 1606 aa13.56□□□□□ -0.24
TMF1-203ENST00000488010 GAPVD1Q14C86 1478 aa13.56□□□□□ -0.24
TMF1-203ENST00000488010 ANP32AP39687 249 aaKnown RBP13.56□□□□□ -0.24
TMF1-203ENST00000488010 SAMD9Q5K651 1589 aa13.56□□□□□ -0.24
TMF1-203ENST00000488010 MYT1LQ9UL68 1186 aa13.55□□□□□ -0.24
TMF1-203ENST00000488010 ZNF644Q9H582 1327 aaPredicted RBP13.55□□□□□ -0.24
TMF1-203ENST00000488010 CDK13Q14004 1512 aaKnown RBP13.54□□□□□ -0.24
TMF1-203ENST00000488010 NUDCQ9Y266 331 aa13.54□□□□□ -0.24
TMF1-203ENST00000488010 NPM2Q86SE8 214 aaKnown RBP13.53□□□□□ -0.24
TMF1-203ENST00000488010 ANKRD30BQ9BXX2 1392 aa13.53□□□□□ -0.24
TMF1-203ENST00000488010 SALL2Q9Y467 1007 aaPredicted RBP13.53□□□□□ -0.24
TMF1-203ENST00000488010 GCC2Q8IWJ2 1684 aa13.53□□□□□ -0.24
TMF1-203ENST00000488010 TCOF1Q13428 1488 aaKnown RBP13.52□□□□□ -0.25
TMF1-203ENST00000488010 URB2Q14146 1524 aaKnown RBP13.52□□□□□ -0.25
TMF1-203ENST00000488010 TMC1Q8TDI8 760 aa13.52□□□□□ -0.25
TMF1-203ENST00000488010 RTL5Q5HYW3 569 aaPredicted RBP13.51□□□□□ -0.25
TMF1-203ENST00000488010 ZBTB47Q9UFB7 747 aaPredicted RBP13.51□□□□□ -0.25
TMF1-203ENST00000488010 RPRD2Q5VT52 1461 aaKnown RBP13.51□□□□□ -0.25
TMF1-203ENST00000488010 THOC2Q8NI27 1593 aaKnown RBP13.51□□□□□ -0.25
TMF1-203ENST00000488010 ZNF777Q9ULD5 760 aaPredicted RBP13.5□□□□□ -0.25
TMF1-203ENST00000488010 SMG6Q86US8 1419 aaKnown RBP13.5□□□□□ -0.25
TMF1-203ENST00000488010 ARHGEF11O15085 1522 aa13.5□□□□□ -0.25
TMF1-203ENST00000488010 EPRSP07814 1512 aaKnown RBP13.5□□□□□ -0.25
TMF1-203ENST00000488010 IPO9Q96P70 1041 aaKnown RBP13.49□□□□□ -0.25
TMF1-203ENST00000488010 TEX14Q8IWB6 1497 aa13.48□□□□□ -0.25
TMF1-203ENST00000488010 USP47Q96K76 1375 aa13.48□□□□□ -0.25
TMF1-203ENST00000488010 DAPK1P53355 1430 aa13.47□□□□□ -0.25
TMF1-203ENST00000488010 SPATA31E1Q6ZUB1 1445 aa13.47□□□□□ -0.25
TMF1-203ENST00000488010 MIA2Q96PC5 1412 aa13.47□□□□□ -0.25
TMF1-203ENST00000488010 LAMC3Q9Y6N6 1575 aa13.45□□□□□ -0.26
TMF1-203ENST00000488010 KDM2AQ9Y2K7 1162 aa13.45□□□□□ -0.26
TMF1-203ENST00000488010 DHX29Q7Z478 1369 aaKnown RBP13.45□□□□□ -0.26
TMF1-203ENST00000488010 ABCA5Q8WWZ7 1642 aa13.45□□□□□ -0.26
TMF1-203ENST00000488010 ABCC5O15440 1437 aa13.44□□□□□ -0.26
TMF1-203ENST00000488010 PKD2Q13563 968 aa13.44□□□□□ -0.26
TMF1-203ENST00000488010 PNISRQ8TF01 805 aaKnown RBP13.43□□□□□ -0.26
TMF1-203ENST00000488010 CARD11Q9BXL7 1154 aa13.42□□□□□ -0.26
TMF1-203ENST00000488010 LAS1LQ9Y4W2 734 aaKnown RBP13.42□□□□□ -0.26
TMF1-203ENST00000488010 EXOC6Q8TAG9 804 aa13.41□□□□□ -0.26
TMF1-203ENST00000488010 CFDP1Q9UEE9 299 aaPredicted RBP13.41□□□□□ -0.26
TMF1-203ENST00000488010 ROCK1Q13464 1354 aa13.4□□□□□ -0.26
TMF1-203ENST00000488010 RNF123Q5XPI4 1314 aa13.4□□□□□ -0.26
TMF1-203ENST00000488010 IQGAP2Q13576 1575 aa13.39□□□□□ -0.27
TMF1-203ENST00000488010 DNAJC5BQ9UF47 199 aa13.38□□□□□ -0.27
TMF1-203ENST00000488010 ST20-MTHFSA0A0A6YYL1 179 aa13.38□□□□□ -0.27
TMF1-203ENST00000488010 RRP1P56182 461 aaKnown RBP13.38□□□□□ -0.27
TMF1-203ENST00000488010 KIF21AQ7Z4S6 1674 aa13.37□□□□□ -0.27
TMF1-203ENST00000488010 WDR62O43379 1518 aa13.37□□□□□ -0.27
TMF1-203ENST00000488010 BCORL1Q5H9F3 1711 aa13.37□□□□□ -0.27
TMF1-203ENST00000488010 PZPP20742 1482 aa13.36□□□□□ -0.27
TMF1-203ENST00000488010 RCAN3Q9UKA8 241 aa13.36□□□□□ -0.27
TMF1-203ENST00000488010 RTN4Q9NQC3 1192 aaKnown RBP13.36□□□□□ -0.27
TMF1-203ENST00000488010 PDS5BQ9NTI5 1447 aa13.36□□□□□ -0.27
TMF1-203ENST00000488010 DNMT1P26358 1616 aaKnown RBP13.35□□□□□ -0.27
TMF1-203ENST00000488010 KIAA1107Q9UPP5 1409 aa13.34□□□□□ -0.27
TMF1-203ENST00000488010 NEFMP07197 916 aa13.34□□□□□ -0.27
TMF1-203ENST00000488010 DCAF11Q8TEB1 546 aa13.34□□□□□ -0.27
TMF1-203ENST00000488010 KIF15Q9NS87 1388 aa13.34□□□□□ -0.27
TMF1-203ENST00000488010 PDE4AP27815 886 aa13.34□□□□□ -0.27
TMF1-203ENST00000488010 SKAP1Q86WV1 359 aa13.34□□□□□ -0.27
TMF1-203ENST00000488010 PRG4Q92954 1404 aaPredicted RBP13.33□□□□□ -0.27
TMF1-203ENST00000488010 MYBBP1AQ9BQG0 1328 aaKnown RBP13.33□□□□□ -0.27
TMF1-203ENST00000488010 PLIN1O60240 522 aa13.33□□□□□ -0.28
TMF1-203ENST00000488010 POLR1AO95602 1720 aaPredicted RBP13.33□□□□□ -0.28
TMF1-203ENST00000488010 CDCA7LQ96GN5 454 aa13.32□□□□□ -0.28
TMF1-203ENST00000488010 NUP155O75694 1391 aa13.32□□□□□ -0.28
TMF1-203ENST00000488010 TCERG1O14776 1098 aaKnown RBP13.32□□□□□ -0.28
TMF1-203ENST00000488010 ROCK2O75116 1388 aaKnown RBP13.32□□□□□ -0.28
TMF1-203ENST00000488010 IL27Q8NEV9 243 aa13.31□□□□□ -0.28
TMF1-203ENST00000488010 RALBP1Q15311 655 aa13.3□□□□□ -0.28
TMF1-203ENST00000488010 ARID4BQ4LE39 1312 aaPredicted RBP13.3□□□□□ -0.28
TMF1-203ENST00000488010 CAMSAP2Q08AD1 1489 aa13.3□□□□□ -0.28
TMF1-203ENST00000488010 MBD5Q9P267 1494 aa13.3□□□□□ -0.28
TMF1-203ENST00000488010 NUP153P49790 1475 aaKnown RBP13.29□□□□□ -0.28
TMF1-203ENST00000488010 CC2D1BQ5T0F9 858 aaKnown RBP13.29□□□□□ -0.28
TMF1-203ENST00000488010 BRD4O60885 1362 aaPredicted RBP13.29□□□□□ -0.28
TMF1-203ENST00000488010 ANKRD30AQ9BXX3 1397 aa13.29□□□□□ -0.28
TMF1-203ENST00000488010 KDM5CP41229 1560 aa13.28□□□□□ -0.28
TMF1-203ENST00000488010 RGL3Q3MIN7 710 aa13.28□□□□□ -0.28
TMF1-203ENST00000488010 ANKRD50Q9ULJ7 1429 aa13.27□□□□□ -0.28
TMF1-203ENST00000488010 TARBP1Q13395 1621 aaKnown RBP13.27□□□□□ -0.28
TMF1-203ENST00000488010 KIF14Q15058 1648 aa13.27□□□□□ -0.28
TMF1-203ENST00000488010 LRPPRCP42704 1394 aaKnown RBP13.27□□□□□ -0.28
TMF1-203ENST00000488010 FBLN2P98095 1184 aa13.27□□□□□ -0.28
TMF1-203ENST00000488010 BACH2Q9BYV9 841 aa13.27□□□□□ -0.28
TMF1-203ENST00000488010 NLRP13Q86W25 1043 aa13.27□□□□□ -0.29
TMF1-203ENST00000488010 ANO8Q9HCE9 1232 aaPredicted RBP13.27□□□□□ -0.29
TMF1-203ENST00000488010 PBRM1Q86U86 1689 aa13.26□□□□□ -0.29
TMF1-203ENST00000488010 KTN1Q86UP2 1357 aaKnown RBP13.26□□□□□ -0.29
TMF1-203ENST00000488010 ADAMTS12P58397 1594 aa13.25□□□□□ -0.29
TMF1-203ENST00000488010 CRBNQ96SW2 442 aa13.25□□□□□ -0.29
TMF1-203ENST00000488010 RALGAPBQ86X10 1494 aa13.24□□□□□ -0.29
TMF1-203ENST00000488010 SLC4A3P48751 1232 aa13.24□□□□□ -0.29
TMF1-203ENST00000488010 TROQ12816 1431 aaPredicted RBP13.24□□□□□ -0.29
TMF1-203ENST00000488010 TSPY4P0CV99 314 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms