RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 AFAP1Q8N556 730 aa20.06■□□□□ 0.8
SREBF1-215ENST00000487401 HECW2Q9P2P5 1572 aa20.05■□□□□ 0.8
SREBF1-215ENST00000487401 ARHGAP5Q13017 1502 aa20.05■□□□□ 0.8
SREBF1-215ENST00000487401 ZFYVE16Q7Z3T8 1539 aa20.05■□□□□ 0.8
SREBF1-215ENST00000487401 ZMYM4Q5VZL5 1548 aa20.04■□□□□ 0.8
SREBF1-215ENST00000487401 FYCO1Q9BQS8 1478 aa20.03■□□□□ 0.8
SREBF1-215ENST00000487401 PLPPR3Q6T4P5 718 aa20.02■□□□□ 0.8
SREBF1-215ENST00000487401 RICTORQ6R327 1708 aa20.02■□□□□ 0.79
SREBF1-215ENST00000487401 ADAMTSL3P82987 1691 aa20.01■□□□□ 0.79
SREBF1-215ENST00000487401 PCF11O94913 1555 aaKnown RBP20.01■□□□□ 0.79
SREBF1-215ENST00000487401 ATP10AO60312 1499 aa20■□□□□ 0.79
SREBF1-215ENST00000487401 ZNF518AQ6AHZ1 1483 aa19.99■□□□□ 0.79
SREBF1-215ENST00000487401 ZNF777Q9ULD5 760 aaPredicted RBP19.98■□□□□ 0.79
SREBF1-215ENST00000487401 BCORL1Q5H9F3 1711 aa19.97■□□□□ 0.79
SREBF1-215ENST00000487401 C9orf84Q5VXU9 1444 aa19.96■□□□□ 0.79
SREBF1-215ENST00000487401 MYO5CQ9NQX4 1742 aa19.95■□□□□ 0.78
SREBF1-215ENST00000487401 MADDQ8WXG6 1647 aa19.94■□□□□ 0.78
SREBF1-215ENST00000487401 MTUS2Q5JR59 1369 aa19.93■□□□□ 0.78
SREBF1-215ENST00000487401 CFDP1Q9UEE9 299 aaPredicted RBP19.92■□□□□ 0.78
SREBF1-215ENST00000487401 TRAPPC8Q9Y2L5 1435 aa19.92■□□□□ 0.78
SREBF1-215ENST00000487401 ILDR1Q86SU0 546 aaPredicted RBP19.91■□□□□ 0.78
SREBF1-215ENST00000487401 CCNB3Q8WWL7 1395 aa19.9■□□□□ 0.78
SREBF1-215ENST00000487401 CEP162Q5TB80 1403 aa19.9■□□□□ 0.78
SREBF1-215ENST00000487401 HNRNPMP52272 730 aaKnown RBP eCLIP19.89■□□□□ 0.77
SREBF1-215ENST00000487401 LRRIQ1Q96JM4 1722 aa19.89■□□□□ 0.77
SREBF1-215ENST00000487401 ARHGEF12Q9NZN5 1544 aa19.88■□□□□ 0.77
SREBF1-215ENST00000487401 MLH3Q9UHC1 1453 aa19.88■□□□□ 0.77
SREBF1-215ENST00000487401 GPATCH8Q9UKJ3 1502 aaKnown RBP19.87■□□□□ 0.77
SREBF1-215ENST00000487401 ESF1Q9H501 851 aaKnown RBP19.87■□□□□ 0.77
SREBF1-215ENST00000487401 KDM5CP41229 1560 aa19.87■□□□□ 0.77
SREBF1-215ENST00000487401 LOC105371045A0A1W2PR82 267 aa19.86■□□□□ 0.77
SREBF1-215ENST00000487401 SPAG9O60271 1321 aaKnown RBP19.85■□□□□ 0.77
SREBF1-215ENST00000487401 CEBPAP49715 358 aaPredicted RBP19.85■□□□□ 0.77
SREBF1-215ENST00000487401 HSPA2P54652 639 aa19.85■□□□□ 0.77
SREBF1-215ENST00000487401 ABCC1P33527 1531 aa19.85■□□□□ 0.77
SREBF1-215ENST00000487401 RIMS1Q86UR5 1692 aaKnown RBP19.84■□□□□ 0.77
SREBF1-215ENST00000487401 PREX2Q70Z35 1606 aa19.84■□□□□ 0.77
SREBF1-215ENST00000487401 LMTK3Q96Q04 1460 aa19.83■□□□□ 0.76
SREBF1-215ENST00000487401 CDC42BPBQ9Y5S2 1711 aa19.82■□□□□ 0.76
SREBF1-215ENST00000487401 KIAA1107Q9UPP5 1409 aa19.81■□□□□ 0.76
SREBF1-215ENST00000487401 SIGLEC1Q9BZZ2 1709 aa19.81■□□□□ 0.76
SREBF1-215ENST00000487401 PLEKHH2Q8IVE3 1493 aa19.8■□□□□ 0.76
SREBF1-215ENST00000487401 DIP2CQ9Y2E4 1556 aa19.78■□□□□ 0.76
SREBF1-215ENST00000487401 ZNF644Q9H582 1327 aaPredicted RBP19.76■□□□□ 0.75
SREBF1-215ENST00000487401 REREQ9P2R6 1566 aa19.76■□□□□ 0.75
SREBF1-215ENST00000487401 SYCP2Q9BX26 1530 aa19.76■□□□□ 0.75
SREBF1-215ENST00000487401 AGLP35573 1532 aa19.75■□□□□ 0.75
SREBF1-215ENST00000487401 SAMD9LQ8IVG5 1584 aa19.74■□□□□ 0.75
SREBF1-215ENST00000487401 CDC42BPAQ5VT25 1732 aa19.73■□□□□ 0.75
SREBF1-215ENST00000487401 ABCA6Q8N139 1617 aa19.73■□□□□ 0.75
SREBF1-215ENST00000487401 EHBP1L1Q8N3D4 1523 aa19.73■□□□□ 0.75
SREBF1-215ENST00000487401 ITSN2Q9NZM3 1697 aa19.73■□□□□ 0.75
SREBF1-215ENST00000487401 FER1L4A9Z1Z3 1794 aa19.71■□□□□ 0.75
SREBF1-215ENST00000487401 CNTLNQ9NXG0 1405 aa19.7■□□□□ 0.74
SREBF1-215ENST00000487401 FBXO41Q8TF61 875 aa19.69■□□□□ 0.74
SREBF1-215ENST00000487401 UHRF1BP1Q6BDS2 1440 aa19.68■□□□□ 0.74
SREBF1-215ENST00000487401 VPS8Q8N3P4 1428 aa19.68■□□□□ 0.74
SREBF1-215ENST00000487401 RSPH4AQ5TD94 716 aa19.68■□□□□ 0.74
SREBF1-215ENST00000487401 GGT6Q6P531 493 aa19.68■□□□□ 0.74
SREBF1-215ENST00000487401 KIDINS220Q9ULH0 1771 aa19.67■□□□□ 0.74
SREBF1-215ENST00000487401 A2MP01023 1474 aa19.67■□□□□ 0.74
SREBF1-215ENST00000487401 NCOA2Q15596 1464 aa19.67■□□□□ 0.74
SREBF1-215ENST00000487401 DMRT2Q9Y5R5 561 aa19.66■□□□□ 0.74
SREBF1-215ENST00000487401 MBD5Q9P267 1494 aa19.66■□□□□ 0.74
SREBF1-215ENST00000487401 ATP7AQ04656 1500 aa19.66■□□□□ 0.74
SREBF1-215ENST00000487401 TIAM1Q13009 1591 aa19.66■□□□□ 0.74
SREBF1-215ENST00000487401 ZMYM3Q14202 1370 aa19.64■□□□□ 0.73
SREBF1-215ENST00000487401 PPP6R1Q9UPN7 881 aa19.63■□□□□ 0.73
SREBF1-215ENST00000487401 RTEL1-TNFRSF6BF6WH68 1400 aa19.62■□□□□ 0.73
SREBF1-215ENST00000487401 TSPY4P0CV99 314 aa19.62■□□□□ 0.73
SREBF1-215ENST00000487401 TSPY10P0CW01 314 aa19.62■□□□□ 0.73
SREBF1-215ENST00000487401 APLP2Q06481 763 aa19.61■□□□□ 0.73
SREBF1-215ENST00000487401 DHX29Q7Z478 1369 aaKnown RBP19.6■□□□□ 0.73
SREBF1-215ENST00000487401 KANK4Q5T7N3 995 aaPredicted RBP19.6■□□□□ 0.73
SREBF1-215ENST00000487401 LRRC9Q6ZRR7 1453 aa19.6■□□□□ 0.73
SREBF1-215ENST00000487401 KIF3BO15066 747 aa19.58■□□□□ 0.72
SREBF1-215ENST00000487401 INO80Q9ULG1 1556 aaPredicted RBP19.57■□□□□ 0.72
SREBF1-215ENST00000487401 CAMSAP2Q08AD1 1489 aa19.57■□□□□ 0.72
SREBF1-215ENST00000487401 CCDC141Q6ZP82 1450 aa19.57■□□□□ 0.72
SREBF1-215ENST00000487401 CERKQ8TCT0 537 aa19.57■□□□□ 0.72
SREBF1-215ENST00000487401 NPATQ14207 1427 aa19.57■□□□□ 0.72
SREBF1-215ENST00000487401 SUPT6HQ7KZ85 1726 aaKnown RBP19.56■□□□□ 0.72
SREBF1-215ENST00000487401 PREX1Q8TCU6 1659 aa19.56■□□□□ 0.72
SREBF1-215ENST00000487401 PLXNC1O60486 1568 aa19.54■□□□□ 0.72
SREBF1-215ENST00000487401 MAP3K1Q13233 1512 aa19.52■□□□□ 0.72
SREBF1-215ENST00000487401 C3P01024 1663 aa19.52■□□□□ 0.71
SREBF1-215ENST00000487401 WASHC2CQ9Y4E1 1318 aa19.51■□□□□ 0.71
SREBF1-215ENST00000487401 PTPRKQ15262 1439 aa19.5■□□□□ 0.71
SREBF1-215ENST00000487401 PTPRTO14522 1441 aa19.48■□□□□ 0.71
SREBF1-215ENST00000487401 MIA2Q96PC5 1412 aa19.48■□□□□ 0.71
SREBF1-215ENST00000487401 MYOM3Q5VTT5 1437 aa19.47■□□□□ 0.71
SREBF1-215ENST00000487401 SETD1BQ9UPS6 1966 aaKnown RBP19.46■□□□□ 0.71
SREBF1-215ENST00000487401 NCOA1Q15788 1441 aa19.46■□□□□ 0.71
SREBF1-215ENST00000487401 NCKAP5LQ9HCH0 1330 aa19.46■□□□□ 0.71
SREBF1-215ENST00000487401 ADGBQ8N7X0 1667 aa19.46■□□□□ 0.71
SREBF1-215ENST00000487401 ARHGEF5Q12774 1597 aa19.44■□□□□ 0.7
SREBF1-215ENST00000487401 MROH2AA6NES4 1674 aa19.44■□□□□ 0.7
SREBF1-215ENST00000487401 FBXO31Q5XUX0 539 aaPredicted RBP19.44■□□□□ 0.7
SREBF1-215ENST00000487401 PKD2Q13563 968 aa19.43■□□□□ 0.7
SREBF1-215ENST00000487401 CLTCQ00610 1675 aaKnown RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms