RNA–Protein interactions for RNA: ENST00000487257.1

PDE12-202, Transcript of phosphodiesterase 12, humanhuman

TSL 1 (best) BASIC

Gene PDE12, Length 3,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE12-202ENST00000487257 NBPF8Q3BBV2 869 aa23.18■■□□□ 1.3
PDE12-202ENST00000487257 CCDC184Q52MB2 194 aa23.18■■□□□ 1.3
PDE12-202ENST00000487257 DISP1Q96F81 1524 aa23.17■■□□□ 1.3
PDE12-202ENST00000487257 IRX6P78412 446 aaPredicted RBP23.17■■□□□ 1.3
PDE12-202ENST00000487257 ABCC5O15440 1437 aa23.16■■□□□ 1.3
PDE12-202ENST00000487257 AKNAQ7Z591 1439 aa23.16■■□□□ 1.3
PDE12-202ENST00000487257 NUP153P49790 1475 aaKnown RBP23.16■■□□□ 1.3
PDE12-202ENST00000487257 CNGB1Q14028 1251 aaPredicted RBP23.14■■□□□ 1.3
PDE12-202ENST00000487257 CDK11AQ9UQ88 783 aaPredicted RBP23.14■■□□□ 1.29
PDE12-202ENST00000487257 KIAA0586Q9BVV6 1533 aa23.14■■□□□ 1.29
PDE12-202ENST00000487257 PRG4Q92954 1404 aaPredicted RBP23.13■■□□□ 1.29
PDE12-202ENST00000487257 IFT140Q96RY7 1462 aa23.12■■□□□ 1.29
PDE12-202ENST00000487257 CHMP7Q8WUX9 453 aaPredicted RBP23.12■■□□□ 1.29
PDE12-202ENST00000487257 CFDP1Q9UEE9 299 aaPredicted RBP23.12■■□□□ 1.29
PDE12-202ENST00000487257 ANKRD30BQ9BXX2 1392 aa23.12■■□□□ 1.29
PDE12-202ENST00000487257 KIAA0556O60303 1618 aa23.11■■□□□ 1.29
PDE12-202ENST00000487257 ZNF326Q5BKZ1 582 aaKnown RBP23.09■■□□□ 1.29
PDE12-202ENST00000487257 FAM9BQ8IZU0 186 aa23.09■■□□□ 1.29
PDE12-202ENST00000487257 GRIN2AQ12879 1464 aa23.08■■□□□ 1.28
PDE12-202ENST00000487257 ROCK1Q13464 1354 aa23.06■■□□□ 1.28
PDE12-202ENST00000487257 PLB1Q6P1J6 1458 aa23.06■■□□□ 1.28
PDE12-202ENST00000487257 POLR3GLQ9BT43 218 aa23.05■■□□□ 1.28
PDE12-202ENST00000487257 CCDC7Q96M83 1385 aa23.05■■□□□ 1.28
PDE12-202ENST00000487257 RAPGEF6Q8TEU7 1601 aa23.05■■□□□ 1.28
PDE12-202ENST00000487257 CNTLNQ9NXG0 1405 aa23.05■■□□□ 1.28
PDE12-202ENST00000487257 RPRD2Q5VT52 1461 aaKnown RBP23.04■■□□□ 1.28
PDE12-202ENST00000487257 DNMT1P26358 1616 aaKnown RBP23.03■■□□□ 1.28
PDE12-202ENST00000487257 PRKRIP1Q9H875 184 aaPredicted RBP23.03■■□□□ 1.28
PDE12-202ENST00000487257 MRS2Q9HD23 443 aa23.02■■□□□ 1.28
PDE12-202ENST00000487257 EIF4G3O43432 1585 aaKnown RBP23.01■■□□□ 1.27
PDE12-202ENST00000487257 NCOA1Q15788 1441 aa23■■□□□ 1.27
PDE12-202ENST00000487257 KIF7Q2M1P5 1343 aa23■■□□□ 1.27
PDE12-202ENST00000487257 TEX14Q8IWB6 1497 aa22.99■■□□□ 1.27
PDE12-202ENST00000487257 ERCC6Q03468 1493 aa22.99■■□□□ 1.27
PDE12-202ENST00000487257 CAMSAP2Q08AD1 1489 aa22.98■■□□□ 1.27
PDE12-202ENST00000487257 TROQ12816 1431 aaPredicted RBP22.98■■□□□ 1.27
PDE12-202ENST00000487257 PKD2Q13563 968 aa22.97■■□□□ 1.27
PDE12-202ENST00000487257 JPH4Q96JJ6 628 aa22.97■■□□□ 1.27
PDE12-202ENST00000487257 RBM19Q9Y4C8 960 aaKnown RBP22.97■■□□□ 1.27
PDE12-202ENST00000487257 ANP32EQ9BTT0 268 aa22.95■■□□□ 1.26
PDE12-202ENST00000487257 GPATCH8Q9UKJ3 1502 aaKnown RBP22.94■■□□□ 1.26
PDE12-202ENST00000487257 PZPP20742 1482 aa22.94■■□□□ 1.26
PDE12-202ENST00000487257 KIF14Q15058 1648 aa22.94■■□□□ 1.26
PDE12-202ENST00000487257 SENP3-EIF4A1A0A087X0R7 540 aa22.93■■□□□ 1.26
PDE12-202ENST00000487257 CEP170Q5SW79 1584 aa22.92■■□□□ 1.26
PDE12-202ENST00000487257 BCL11AQ9H165 835 aa22.92■■□□□ 1.26
PDE12-202ENST00000487257 SPATA31E1Q6ZUB1 1445 aa22.9■■□□□ 1.26
PDE12-202ENST00000487257 PLEKHD1A6NEE1 506 aa22.89■■□□□ 1.25
PDE12-202ENST00000487257 SYNJ2O15056 1496 aa22.86■■□□□ 1.25
PDE12-202ENST00000487257 CARMIL2Q6F5E8 1435 aa22.85■■□□□ 1.25
PDE12-202ENST00000487257 KDM2AQ9Y2K7 1162 aa22.85■■□□□ 1.25
PDE12-202ENST00000487257 ANKRD30AQ9BXX3 1397 aa22.85■■□□□ 1.25
PDE12-202ENST00000487257 MAGI1Q96QZ7 1491 aaPredicted RBP22.85■■□□□ 1.25
PDE12-202ENST00000487257 KIAA1107Q9UPP5 1409 aa22.85■■□□□ 1.25
PDE12-202ENST00000487257 ANKRD50Q9ULJ7 1429 aa22.83■■□□□ 1.25
PDE12-202ENST00000487257 NUP155O75694 1391 aa22.83■■□□□ 1.25
PDE12-202ENST00000487257 USP47Q96K76 1375 aa22.83■■□□□ 1.25
PDE12-202ENST00000487257 HNRNPMP52272 730 aaKnown RBP eCLIP22.83■■□□□ 1.24
PDE12-202ENST00000487257 ITSN2Q9NZM3 1697 aa22.8■■□□□ 1.24
PDE12-202ENST00000487257 TSPY4P0CV99 314 aa22.79■■□□□ 1.24
PDE12-202ENST00000487257 TSPY10P0CW01 314 aa22.79■■□□□ 1.24
PDE12-202ENST00000487257 ZBED9Q6R2W3 1325 aa22.77■■□□□ 1.24
PDE12-202ENST00000487257 CARD11Q9BXL7 1154 aa22.76■■□□□ 1.23
PDE12-202ENST00000487257 B4GALNT3Q6L9W6 998 aa22.75■■□□□ 1.23
PDE12-202ENST00000487257 ADGBQ8N7X0 1667 aa22.75■■□□□ 1.23
PDE12-202ENST00000487257 ATP10BO94823 1461 aa22.75■■□□□ 1.23
PDE12-202ENST00000487257 ADGRL2O95490 1459 aa22.75■■□□□ 1.23
PDE12-202ENST00000487257 C9orf84Q5VXU9 1444 aa22.75■■□□□ 1.23
PDE12-202ENST00000487257 NUP160Q12769 1436 aa22.74■■□□□ 1.23
PDE12-202ENST00000487257 DCAF11Q8TEB1 546 aa22.74■■□□□ 1.23
PDE12-202ENST00000487257 MBD5Q9P267 1494 aa22.73■■□□□ 1.23
PDE12-202ENST00000487257 DHX29Q7Z478 1369 aaKnown RBP22.73■■□□□ 1.23
PDE12-202ENST00000487257 BCORL1Q5H9F3 1711 aa22.73■■□□□ 1.23
PDE12-202ENST00000487257 PPP4R2Q9NY27 417 aa22.71■■□□□ 1.23
PDE12-202ENST00000487257 CROCC2H7BZ55 1655 aa22.71■■□□□ 1.23
PDE12-202ENST00000487257 ADCY10Q96PN6 1610 aa22.7■■□□□ 1.22
PDE12-202ENST00000487257 ST20-MTHFSA0A0A6YYL1 179 aa22.7■■□□□ 1.22
PDE12-202ENST00000487257 CDC42BPAQ5VT25 1732 aa22.69■■□□□ 1.22
PDE12-202ENST00000487257 KIF15Q9NS87 1388 aa22.69■■□□□ 1.22
PDE12-202ENST00000487257 ABCC10Q5T3U5 1492 aa22.67■■□□□ 1.22
PDE12-202ENST00000487257 RGL3Q3MIN7 710 aa22.66■■□□□ 1.22
PDE12-202ENST00000487257 POLR1AO95602 1720 aaPredicted RBP22.65■■□□□ 1.22
PDE12-202ENST00000487257 MSH5O43196 834 aa22.65■■□□□ 1.22
PDE12-202ENST00000487257 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.65■■□□□ 1.22
PDE12-202ENST00000487257 ABCA8O94911 1581 aa22.65■■□□□ 1.22
PDE12-202ENST00000487257 TMC1Q8TDI8 760 aa22.64■■□□□ 1.21
PDE12-202ENST00000487257 KDM5CP41229 1560 aa22.63■■□□□ 1.21
PDE12-202ENST00000487257 PTPRGP23470 1445 aa22.62■■□□□ 1.21
PDE12-202ENST00000487257 ERICH6BQ5W0A0 696 aa22.6■■□□□ 1.21
PDE12-202ENST00000487257 ROCK2O75116 1388 aaKnown RBP22.57■■□□□ 1.2
PDE12-202ENST00000487257 RALGAPBQ86X10 1494 aa22.57■■□□□ 1.2
PDE12-202ENST00000487257 PNISRQ8TF01 805 aaKnown RBP22.57■■□□□ 1.2
PDE12-202ENST00000487257 SHANK2Q9UPX8 1470 aa22.57■■□□□ 1.2
PDE12-202ENST00000487257 UHRF1BP1Q6BDS2 1440 aa22.57■■□□□ 1.2
PDE12-202ENST00000487257 SALL2Q9Y467 1007 aaPredicted RBP22.56■■□□□ 1.2
PDE12-202ENST00000487257 NBPF1Q3BBV0 1214 aa22.55■■□□□ 1.2
PDE12-202ENST00000487257 NUDCQ9Y266 331 aa22.54■■□□□ 1.2
PDE12-202ENST00000487257 ARID4BQ4LE39 1312 aaPredicted RBP22.54■■□□□ 1.2
PDE12-202ENST00000487257 SMG6Q86US8 1419 aaKnown RBP22.51■■□□□ 1.19
PDE12-202ENST00000487257 CCDC141Q6ZP82 1450 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms