RNA–Protein interactions for RNA: ENST00000487239.5

CAD-209, Transcript of carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase, humanhuman

TSL 3

Gene CAD, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAD-209ENST00000487239 MYT1LQ9UL68 1186 aa22.64■■□□□ 1.21
CAD-209ENST00000487239 ZFYVE16Q7Z3T8 1539 aa22.63■■□□□ 1.21
CAD-209ENST00000487239 BCORL1Q5H9F3 1711 aa22.63■■□□□ 1.21
CAD-209ENST00000487239 MAGI2Q86UL8 1455 aa22.63■■□□□ 1.21
CAD-209ENST00000487239 MADDQ8WXG6 1647 aa22.63■■□□□ 1.21
CAD-209ENST00000487239 ZMYM4Q5VZL5 1548 aa22.62■■□□□ 1.21
CAD-209ENST00000487239 AFAP1Q8N556 730 aa22.61■■□□□ 1.21
CAD-209ENST00000487239 KIF14Q15058 1648 aa22.58■■□□□ 1.21
CAD-209ENST00000487239 CASKIN1Q8WXD9 1431 aa22.57■■□□□ 1.2
CAD-209ENST00000487239 ARHGAP5Q13017 1502 aa22.57■■□□□ 1.2
CAD-209ENST00000487239 ATP10AO60312 1499 aa22.55■■□□□ 1.2
CAD-209ENST00000487239 HSPA2P54652 639 aa22.53■■□□□ 1.2
CAD-209ENST00000487239 RIMS1Q86UR5 1692 aaKnown RBP22.52■■□□□ 1.2
CAD-209ENST00000487239 CCDC18Q5T9S5 1454 aa22.52■■□□□ 1.2
CAD-209ENST00000487239 ZNF518AQ6AHZ1 1483 aa22.52■■□□□ 1.2
CAD-209ENST00000487239 MYO5CQ9NQX4 1742 aa22.51■■□□□ 1.19
CAD-209ENST00000487239 C9orf84Q5VXU9 1444 aa22.51■■□□□ 1.19
CAD-209ENST00000487239 LMTK3Q96Q04 1460 aa22.51■■□□□ 1.19
CAD-209ENST00000487239 PCF11O94913 1555 aaKnown RBP22.5■■□□□ 1.19
CAD-209ENST00000487239 ZNF777Q9ULD5 760 aaPredicted RBP22.49■■□□□ 1.19
CAD-209ENST00000487239 SIGLEC1Q9BZZ2 1709 aa22.48■■□□□ 1.19
CAD-209ENST00000487239 CEBPAP49715 358 aaPredicted RBP22.47■■□□□ 1.19
CAD-209ENST00000487239 LRRIQ1Q96JM4 1722 aa22.45■■□□□ 1.19
CAD-209ENST00000487239 FYCO1Q9BQS8 1478 aa22.45■■□□□ 1.18
CAD-209ENST00000487239 TRAPPC8Q9Y2L5 1435 aa22.44■■□□□ 1.18
CAD-209ENST00000487239 FBXO41Q8TF61 875 aa22.4■■□□□ 1.18
CAD-209ENST00000487239 ESF1Q9H501 851 aaKnown RBP22.4■■□□□ 1.18
CAD-209ENST00000487239 KDM5CP41229 1560 aa22.4■■□□□ 1.18
CAD-209ENST00000487239 ARHGEF12Q9NZN5 1544 aa22.4■■□□□ 1.18
CAD-209ENST00000487239 MLH3Q9UHC1 1453 aa22.39■■□□□ 1.17
CAD-209ENST00000487239 CDC42BPBQ9Y5S2 1711 aa22.37■■□□□ 1.17
CAD-209ENST00000487239 HNRNPMP52272 730 aaKnown RBP eCLIP22.37■■□□□ 1.17
CAD-209ENST00000487239 CFDP1Q9UEE9 299 aaPredicted RBP22.37■■□□□ 1.17
CAD-209ENST00000487239 ABCC1P33527 1531 aa22.36■■□□□ 1.17
CAD-209ENST00000487239 PREX2Q70Z35 1606 aa22.35■■□□□ 1.17
CAD-209ENST00000487239 FER1L4A9Z1Z3 1794 aa22.35■■□□□ 1.17
CAD-209ENST00000487239 DIP2CQ9Y2E4 1556 aa22.34■■□□□ 1.17
CAD-209ENST00000487239 GPATCH8Q9UKJ3 1502 aaKnown RBP22.34■■□□□ 1.17
CAD-209ENST00000487239 MTUS2Q5JR59 1369 aa22.34■■□□□ 1.17
CAD-209ENST00000487239 CCNB3Q8WWL7 1395 aa22.33■■□□□ 1.17
CAD-209ENST00000487239 SPAG9O60271 1321 aaKnown RBP22.32■■□□□ 1.16
CAD-209ENST00000487239 ABCA6Q8N139 1617 aa22.29■■□□□ 1.16
CAD-209ENST00000487239 REREQ9P2R6 1566 aa22.26■■□□□ 1.15
CAD-209ENST00000487239 ITSN2Q9NZM3 1697 aa22.26■■□□□ 1.15
CAD-209ENST00000487239 SYCP2Q9BX26 1530 aa22.26■■□□□ 1.15
CAD-209ENST00000487239 CDC42BPAQ5VT25 1732 aa22.26■■□□□ 1.15
CAD-209ENST00000487239 UHRF1BP1Q6BDS2 1440 aa22.25■■□□□ 1.15
CAD-209ENST00000487239 AGLP35573 1532 aa22.25■■□□□ 1.15
CAD-209ENST00000487239 CEP162Q5TB80 1403 aa22.24■■□□□ 1.15
CAD-209ENST00000487239 ZNF644Q9H582 1327 aaPredicted RBP22.24■■□□□ 1.15
CAD-209ENST00000487239 SAMD9LQ8IVG5 1584 aa22.24■■□□□ 1.15
CAD-209ENST00000487239 KIAA1107Q9UPP5 1409 aa22.23■■□□□ 1.15
CAD-209ENST00000487239 CERKQ8TCT0 537 aa22.22■■□□□ 1.15
CAD-209ENST00000487239 DMRT2Q9Y5R5 561 aa22.22■■□□□ 1.15
CAD-209ENST00000487239 PLEKHH2Q8IVE3 1493 aa22.22■■□□□ 1.15
CAD-209ENST00000487239 KIDINS220Q9ULH0 1771 aa22.2■■□□□ 1.14
CAD-209ENST00000487239 GGT6Q6P531 493 aa22.19■■□□□ 1.14
CAD-209ENST00000487239 CNTLNQ9NXG0 1405 aa22.18■■□□□ 1.14
CAD-209ENST00000487239 LOC105371045A0A1W2PR82 267 aa22.18■■□□□ 1.14
CAD-209ENST00000487239 PREX1Q8TCU6 1659 aa22.17■■□□□ 1.14
CAD-209ENST00000487239 ZMYM3Q14202 1370 aa22.15■■□□□ 1.14
CAD-209ENST00000487239 ATP7AQ04656 1500 aa22.15■■□□□ 1.14
CAD-209ENST00000487239 A2MP01023 1474 aa22.14■■□□□ 1.13
CAD-209ENST00000487239 EHBP1L1Q8N3D4 1523 aa22.13■■□□□ 1.13
CAD-209ENST00000487239 C3P01024 1663 aa22.11■■□□□ 1.13
CAD-209ENST00000487239 TIAM1Q13009 1591 aa22.1■■□□□ 1.13
CAD-209ENST00000487239 MBD5Q9P267 1494 aa22.09■■□□□ 1.13
CAD-209ENST00000487239 SETD1BQ9UPS6 1966 aaKnown RBP22.07■■□□□ 1.12
CAD-209ENST00000487239 SUPT6HQ7KZ85 1726 aaKnown RBP22.06■■□□□ 1.12
CAD-209ENST00000487239 NCOA2Q15596 1464 aa22.06■■□□□ 1.12
CAD-209ENST00000487239 INO80Q9ULG1 1556 aaPredicted RBP22.06■■□□□ 1.12
CAD-209ENST00000487239 NPATQ14207 1427 aa22.06■■□□□ 1.12
CAD-209ENST00000487239 PPP6R1Q9UPN7 881 aa22.05■■□□□ 1.12
CAD-209ENST00000487239 RSPH4AQ5TD94 716 aa22.04■■□□□ 1.12
CAD-209ENST00000487239 DHX29Q7Z478 1369 aaKnown RBP22.03■■□□□ 1.12
CAD-209ENST00000487239 KIF3BO15066 747 aa22.03■■□□□ 1.12
CAD-209ENST00000487239 RTEL1-TNFRSF6BF6WH68 1400 aa22.03■■□□□ 1.12
CAD-209ENST00000487239 PTPRTO14522 1441 aa22.03■■□□□ 1.12
CAD-209ENST00000487239 PLXNC1O60486 1568 aa22.03■■□□□ 1.12
CAD-209ENST00000487239 STRCQ7RTU9 1775 aa22.02■■□□□ 1.12
CAD-209ENST00000487239 NCKAP5LQ9HCH0 1330 aa22.02■■□□□ 1.12
CAD-209ENST00000487239 TSPY4P0CV99 314 aa22.01■■□□□ 1.11
CAD-209ENST00000487239 TSPY10P0CW01 314 aa22.01■■□□□ 1.11
CAD-209ENST00000487239 NCOA1Q15788 1441 aa22■■□□□ 1.11
CAD-209ENST00000487239 PTPRKQ15262 1439 aa21.99■■□□□ 1.11
CAD-209ENST00000487239 VPS8Q8N3P4 1428 aa21.99■■□□□ 1.11
CAD-209ENST00000487239 CAMSAP2Q08AD1 1489 aa21.99■■□□□ 1.11
CAD-209ENST00000487239 CCDC141Q6ZP82 1450 aa21.98■■□□□ 1.11
CAD-209ENST00000487239 KANK4Q5T7N3 995 aaPredicted RBP21.98■■□□□ 1.11
CAD-209ENST00000487239 CLTCQ00610 1675 aaKnown RBP21.97■■□□□ 1.11
CAD-209ENST00000487239 MROH2AA6NES4 1674 aa21.96■■□□□ 1.11
CAD-209ENST00000487239 WASHC2CQ9Y4E1 1318 aa21.96■■□□□ 1.11
CAD-209ENST00000487239 CAMSAP1Q5T5Y3 1602 aa21.95■■□□□ 1.1
CAD-209ENST00000487239 LRRC9Q6ZRR7 1453 aa21.95■■□□□ 1.1
CAD-209ENST00000487239 FBXO31Q5XUX0 539 aaPredicted RBP21.94■■□□□ 1.1
CAD-209ENST00000487239 ADGBQ8N7X0 1667 aa21.93■■□□□ 1.1
CAD-209ENST00000487239 PKD2Q13563 968 aa21.92■■□□□ 1.1
CAD-209ENST00000487239 APLP2Q06481 763 aa21.88■■□□□ 1.09
CAD-209ENST00000487239 ZNF335Q9H4Z2 1342 aaPredicted RBP21.87■■□□□ 1.09
CAD-209ENST00000487239 TNRQ92752 1358 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms