RNA–Protein interactions for RNA: ENST00000486935.2

SEMA4D-219, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-219ENST00000486935 ARHGEF40Q8TER5 1519 aa24.7■■□□□ 1.54
SEMA4D-219ENST00000486935 FYCO1Q9BQS8 1478 aa24.7■■□□□ 1.54
SEMA4D-219ENST00000486935 AFAP1Q8N556 730 aa24.69■■□□□ 1.54
SEMA4D-219ENST00000486935 MAGI2Q86UL8 1455 aa24.69■■□□□ 1.54
SEMA4D-219ENST00000486935 ZMYM4Q5VZL5 1548 aa24.68■■□□□ 1.54
SEMA4D-219ENST00000486935 ZFYVE16Q7Z3T8 1539 aa24.68■■□□□ 1.54
SEMA4D-219ENST00000486935 MYO5CQ9NQX4 1742 aa24.68■■□□□ 1.54
SEMA4D-219ENST00000486935 PTPRMP28827 1452 aa24.68■■□□□ 1.54
SEMA4D-219ENST00000486935 ADAMTSL3P82987 1691 aa24.67■■□□□ 1.54
SEMA4D-219ENST00000486935 MYT1LQ9UL68 1186 aa24.67■■□□□ 1.54
SEMA4D-219ENST00000486935 HECW2Q9P2P5 1572 aa24.66■■□□□ 1.54
SEMA4D-219ENST00000486935 MLECQ14165 292 aa24.65■■□□□ 1.54
SEMA4D-219ENST00000486935 BCORL1Q5H9F3 1711 aa24.64■■□□□ 1.53
SEMA4D-219ENST00000486935 PLPPR3Q6T4P5 718 aa24.61■■□□□ 1.53
SEMA4D-219ENST00000486935 ATP10AO60312 1499 aa24.59■■□□□ 1.53
SEMA4D-219ENST00000486935 ZNF518AQ6AHZ1 1483 aa24.59■■□□□ 1.53
SEMA4D-219ENST00000486935 ZNF777Q9ULD5 760 aaPredicted RBP24.59■■□□□ 1.53
SEMA4D-219ENST00000486935 MADDQ8WXG6 1647 aa24.58■■□□□ 1.53
SEMA4D-219ENST00000486935 CEP162Q5TB80 1403 aa24.57■■□□□ 1.52
SEMA4D-219ENST00000486935 CDC42BPBQ9Y5S2 1711 aa24.55■■□□□ 1.52
SEMA4D-219ENST00000486935 C9orf84Q5VXU9 1444 aa24.54■■□□□ 1.52
SEMA4D-219ENST00000486935 TRAPPC8Q9Y2L5 1435 aa24.53■■□□□ 1.52
SEMA4D-219ENST00000486935 MTUS2Q5JR59 1369 aa24.53■■□□□ 1.52
SEMA4D-219ENST00000486935 ARHGEF12Q9NZN5 1544 aa24.52■■□□□ 1.52
SEMA4D-219ENST00000486935 PREX2Q70Z35 1606 aa24.52■■□□□ 1.52
SEMA4D-219ENST00000486935 SIGLEC1Q9BZZ2 1709 aa24.52■■□□□ 1.52
SEMA4D-219ENST00000486935 GPATCH8Q9UKJ3 1502 aaKnown RBP24.51■■□□□ 1.51
SEMA4D-219ENST00000486935 CFDP1Q9UEE9 299 aaPredicted RBP24.5■■□□□ 1.51
SEMA4D-219ENST00000486935 HNRNPMP52272 730 aaKnown RBP eCLIP24.49■■□□□ 1.51
SEMA4D-219ENST00000486935 CCNB3Q8WWL7 1395 aa24.49■■□□□ 1.51
SEMA4D-219ENST00000486935 KDM5CP41229 1560 aa24.49■■□□□ 1.51
SEMA4D-219ENST00000486935 RIMS1Q86UR5 1692 aaKnown RBP24.49■■□□□ 1.51
SEMA4D-219ENST00000486935 ABCC1P33527 1531 aa24.48■■□□□ 1.51
SEMA4D-219ENST00000486935 MLH3Q9UHC1 1453 aa24.47■■□□□ 1.51
SEMA4D-219ENST00000486935 CDC42BPAQ5VT25 1732 aa24.45■■□□□ 1.5
SEMA4D-219ENST00000486935 SPAG9O60271 1321 aaKnown RBP24.41■■□□□ 1.5
SEMA4D-219ENST00000486935 CEBPAP49715 358 aaPredicted RBP24.41■■□□□ 1.5
SEMA4D-219ENST00000486935 DIP2CQ9Y2E4 1556 aa24.41■■□□□ 1.5
SEMA4D-219ENST00000486935 ITSN2Q9NZM3 1697 aa24.4■■□□□ 1.5
SEMA4D-219ENST00000486935 SAMD9LQ8IVG5 1584 aa24.39■■□□□ 1.5
SEMA4D-219ENST00000486935 LMTK3Q96Q04 1460 aa24.38■■□□□ 1.49
SEMA4D-219ENST00000486935 HSPA2P54652 639 aa24.38■■□□□ 1.49
SEMA4D-219ENST00000486935 ILDR1Q86SU0 546 aaPredicted RBP24.38■■□□□ 1.49
SEMA4D-219ENST00000486935 ZNF644Q9H582 1327 aaPredicted RBP24.37■■□□□ 1.49
SEMA4D-219ENST00000486935 KIAA1107Q9UPP5 1409 aa24.37■■□□□ 1.49
SEMA4D-219ENST00000486935 SYCP2Q9BX26 1530 aa24.37■■□□□ 1.49
SEMA4D-219ENST00000486935 ABCA6Q8N139 1617 aa24.36■■□□□ 1.49
SEMA4D-219ENST00000486935 ESF1Q9H501 851 aaKnown RBP24.36■■□□□ 1.49
SEMA4D-219ENST00000486935 FER1L4A9Z1Z3 1794 aa24.35■■□□□ 1.49
SEMA4D-219ENST00000486935 PLEKHH2Q8IVE3 1493 aa24.35■■□□□ 1.49
SEMA4D-219ENST00000486935 EHBP1L1Q8N3D4 1523 aa24.34■■□□□ 1.49
SEMA4D-219ENST00000486935 REREQ9P2R6 1566 aa24.33■■□□□ 1.49
SEMA4D-219ENST00000486935 KIDINS220Q9ULH0 1771 aa24.31■■□□□ 1.48
SEMA4D-219ENST00000486935 AGLP35573 1532 aa24.3■■□□□ 1.48
SEMA4D-219ENST00000486935 VPS8Q8N3P4 1428 aa24.29■■□□□ 1.48
SEMA4D-219ENST00000486935 TIAM1Q13009 1591 aa24.29■■□□□ 1.48
SEMA4D-219ENST00000486935 NCOA2Q15596 1464 aa24.26■■□□□ 1.47
SEMA4D-219ENST00000486935 ATP7AQ04656 1500 aa24.24■■□□□ 1.47
SEMA4D-219ENST00000486935 MBD5Q9P267 1494 aa24.23■■□□□ 1.47
SEMA4D-219ENST00000486935 A2MP01023 1474 aa24.21■■□□□ 1.47
SEMA4D-219ENST00000486935 KANK4Q5T7N3 995 aaPredicted RBP24.21■■□□□ 1.47
SEMA4D-219ENST00000486935 GGT6Q6P531 493 aa24.2■■□□□ 1.46
SEMA4D-219ENST00000486935 LRRC9Q6ZRR7 1453 aa24.19■■□□□ 1.46
SEMA4D-219ENST00000486935 CNTLNQ9NXG0 1405 aa24.18■■□□□ 1.46
SEMA4D-219ENST00000486935 RSPH4AQ5TD94 716 aa24.18■■□□□ 1.46
SEMA4D-219ENST00000486935 SUPT6HQ7KZ85 1726 aaKnown RBP24.18■■□□□ 1.46
SEMA4D-219ENST00000486935 INO80Q9ULG1 1556 aaPredicted RBP24.17■■□□□ 1.46
SEMA4D-219ENST00000486935 UHRF1BP1Q6BDS2 1440 aa24.16■■□□□ 1.46
SEMA4D-219ENST00000486935 RTEL1-TNFRSF6BF6WH68 1400 aa24.15■■□□□ 1.46
SEMA4D-219ENST00000486935 ZMYM3Q14202 1370 aa24.15■■□□□ 1.46
SEMA4D-219ENST00000486935 CAMSAP2Q08AD1 1489 aa24.13■■□□□ 1.45
SEMA4D-219ENST00000486935 TSPY4P0CV99 314 aa24.12■■□□□ 1.45
SEMA4D-219ENST00000486935 TSPY10P0CW01 314 aa24.12■■□□□ 1.45
SEMA4D-219ENST00000486935 APLP2Q06481 763 aa24.12■■□□□ 1.45
SEMA4D-219ENST00000486935 C3P01024 1663 aa24.11■■□□□ 1.45
SEMA4D-219ENST00000486935 PREX1Q8TCU6 1659 aa24.11■■□□□ 1.45
SEMA4D-219ENST00000486935 DHX29Q7Z478 1369 aaKnown RBP24.11■■□□□ 1.45
SEMA4D-219ENST00000486935 CCDC141Q6ZP82 1450 aa24.11■■□□□ 1.45
SEMA4D-219ENST00000486935 PLXNC1O60486 1568 aa24.1■■□□□ 1.45
SEMA4D-219ENST00000486935 MAP3K1Q13233 1512 aa24.1■■□□□ 1.45
SEMA4D-219ENST00000486935 FBXO41Q8TF61 875 aa24.09■■□□□ 1.45
SEMA4D-219ENST00000486935 PPP6R1Q9UPN7 881 aa24.09■■□□□ 1.45
SEMA4D-219ENST00000486935 KIF3BO15066 747 aa24.08■■□□□ 1.45
SEMA4D-219ENST00000486935 DMRT2Q9Y5R5 561 aa24.07■■□□□ 1.44
SEMA4D-219ENST00000486935 ADGBQ8N7X0 1667 aa24.05■■□□□ 1.44
SEMA4D-219ENST00000486935 SETD1BQ9UPS6 1966 aaKnown RBP24.04■■□□□ 1.44
SEMA4D-219ENST00000486935 NPATQ14207 1427 aa24.03■■□□□ 1.44
SEMA4D-219ENST00000486935 MYOM3Q5VTT5 1437 aa24.01■■□□□ 1.43
SEMA4D-219ENST00000486935 CLTCQ00610 1675 aaKnown RBP24■■□□□ 1.43
SEMA4D-219ENST00000486935 MIA2Q96PC5 1412 aa24■■□□□ 1.43
SEMA4D-219ENST00000486935 ARHGEF5Q12774 1597 aa23.99■■□□□ 1.43
SEMA4D-219ENST00000486935 MROH2AA6NES4 1674 aa23.99■■□□□ 1.43
SEMA4D-219ENST00000486935 CERKQ8TCT0 537 aa23.99■■□□□ 1.43
SEMA4D-219ENST00000486935 PTPRKQ15262 1439 aa23.98■■□□□ 1.43
SEMA4D-219ENST00000486935 WASHC2CQ9Y4E1 1318 aa23.97■■□□□ 1.43
SEMA4D-219ENST00000486935 STRCQ7RTU9 1775 aa23.94■■□□□ 1.42
SEMA4D-219ENST00000486935 FBXO31Q5XUX0 539 aaPredicted RBP23.93■■□□□ 1.42
SEMA4D-219ENST00000486935 NCKAP5LQ9HCH0 1330 aa23.91■■□□□ 1.42
SEMA4D-219ENST00000486935 PTPRTO14522 1441 aa23.91■■□□□ 1.42
SEMA4D-219ENST00000486935 NCOA1Q15788 1441 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms