RNA–Protein interactions for RNA: ENST00000486428.6

CCNC-206, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-206ENST00000486428 ZSWIM6Q9HCJ5 1215 aa12.54□□□□□ -0.4
CCNC-206ENST00000486428 ERBB3P21860 1342 aa12.49□□□□□ -0.41
CCNC-206ENST00000486428 PKD2Q13563 968 aa12.48□□□□□ -0.41
CCNC-206ENST00000486428 FBXO22Q8NEZ5 403 aa12.48□□□□□ -0.41
CCNC-206ENST00000486428 RGL2O15211 777 aa12.46□□□□□ -0.41
CCNC-206ENST00000486428 MFRPQ9BY79 579 aa12.46□□□□□ -0.41
CCNC-206ENST00000486428 SPNS2Q8IVW8 549 aa12.45□□□□□ -0.42
CCNC-206ENST00000486428 TMEM92Q6UXU6 159 aa12.43□□□□□ -0.42
CCNC-206ENST00000486428 MMRN1Q13201 1228 aa12.42□□□□□ -0.42
CCNC-206ENST00000486428 RB1CC1Q8TDY2 1594 aa12.39□□□□□ -0.43
CCNC-206ENST00000486428 POTEB3A0JP26 581 aa12.36□□□□□ -0.43
CCNC-206ENST00000486428 VARS2Q5ST30 1063 aaKnown RBP12.36□□□□□ -0.43
CCNC-206ENST00000486428 POTEBQ6S5H4 581 aa12.36□□□□□ -0.43
CCNC-206ENST00000486428 TMC2Q8TDI7 906 aa12.36□□□□□ -0.43
CCNC-206ENST00000486428 KRTAP3-3Q9BYR6 98 aa12.36□□□□□ -0.43
CCNC-206ENST00000486428 KRTAP3-2Q9BYR7 98 aa12.36□□□□□ -0.43
CCNC-206ENST00000486428 DCAF8L2P0C7V8 631 aa12.34□□□□□ -0.43
CCNC-206ENST00000486428 GPR153Q6NV75 609 aa12.34□□□□□ -0.43
CCNC-206ENST00000486428 C2orf72A6NCS6 295 aa12.3□□□□□ -0.44
CCNC-206ENST00000486428 HS6ST3Q8IZP7 471 aa12.3□□□□□ -0.44
CCNC-206ENST00000486428 ZNF687Q8N1G0 1237 aa12.3□□□□□ -0.44
CCNC-206ENST00000486428 RYDENQ9NUL5 291 aaKnown RBP12.3□□□□□ -0.44
CCNC-206ENST00000486428 KIF3CO14782 793 aa12.28□□□□□ -0.44
CCNC-206ENST00000486428 ARSIQ5FYB1 569 aa12.28□□□□□ -0.44
CCNC-206ENST00000486428 PTGER2P43116 358 aa12.25□□□□□ -0.45
CCNC-206ENST00000486428 ZNF316A6NFI3 1004 aaPredicted RBP12.24□□□□□ -0.45
CCNC-206ENST00000486428 SLC34A2O95436 690 aa12.24□□□□□ -0.45
CCNC-206ENST00000486428 CHGAP10645 457 aaKnown RBP12.22□□□□□ -0.45
CCNC-206ENST00000486428 DNAJC5Q9H3Z4 198 aa12.2□□□□□ -0.46
CCNC-206ENST00000486428 NACADO15069 1562 aa12.2□□□□□ -0.46
CCNC-206ENST00000486428 PSDA5PKW4 1024 aaPredicted RBP12.18□□□□□ -0.46
CCNC-206ENST00000486428 PCDHGA4Q9Y5G9 962 aa12.18□□□□□ -0.46
CCNC-206ENST00000486428 PPP1R37O75864 691 aa12.17□□□□□ -0.46
CCNC-206ENST00000486428 NUDT7P0C024 238 aa12.17□□□□□ -0.46
CCNC-206ENST00000486428 PBX2P40425 430 aa12.17□□□□□ -0.46
CCNC-206ENST00000486428 RNF166Q96A37 237 aaPredicted RBP12.17□□□□□ -0.46
CCNC-206ENST00000486428 KHSRPQ92945 711 aaKnown RBP eCLIP12.15□□□□□ -0.468e-9■■■■■ 30.8
CCNC-206ENST00000486428 MYT1LQ9UL68 1186 aa12.14□□□□□ -0.47
CCNC-206ENST00000486428 TBC1D12O60347 775 aa12.13□□□□□ -0.47
CCNC-206ENST00000486428 FOXK1P85037 733 aa12.12□□□□□ -0.47
CCNC-206ENST00000486428 GPHNQ9NQX3 736 aaPredicted RBP12.12□□□□□ -0.47
CCNC-206ENST00000486428 ANKRD13DQ6ZTN6 518 aa12.11□□□□□ -0.47
CCNC-206ENST00000486428 LHX6Q9UPM6 363 aa12.09□□□□□ -0.47
CCNC-206ENST00000486428 LSM11P83369 360 aaKnown RBP eCLIP12.08□□□□□ -0.48
CCNC-206ENST00000486428 PLPP6Q8IY26 295 aa12.08□□□□□ -0.48
CCNC-206ENST00000486428 PTCD2Q8WV60 388 aaKnown RBP12.08□□□□□ -0.48
CCNC-206ENST00000486428 UNC13AQ9UPW8 1703 aa12.08□□□□□ -0.48
CCNC-206ENST00000486428 BICRAQ9NZM4 1560 aa12.05□□□□□ -0.48
CCNC-206ENST00000486428 KCNH8Q96L42 1107 aa12.04□□□□□ -0.48
CCNC-206ENST00000486428 CECR2Q9BXF3 1484 aa12.02□□□□□ -0.49
CCNC-206ENST00000486428 DSG2Q14126 1118 aa12.01□□□□□ -0.49
CCNC-206ENST00000486428 PPP4R3BQ5MIZ7 849 aa12.01□□□□□ -0.49
CCNC-206ENST00000486428 ARHGAP33O14559 1287 aa12□□□□□ -0.49
CCNC-206ENST00000486428 NKX1-1Q15270 411 aaPredicted RBP11.98□□□□□ -0.49
CCNC-206ENST00000486428 PDE4AP27815 886 aa11.97□□□□□ -0.49
CCNC-206ENST00000486428 CC2D2AQ9P2K1 1620 aa11.94□□□□□ -0.5
CCNC-206ENST00000486428 PPP1R15BQ5SWA1 713 aa11.94□□□□□ -0.5
CCNC-206ENST00000486428 CRISPLD2Q9H0B8 497 aa11.94□□□□□ -0.5
CCNC-206ENST00000486428 AXIN2Q9Y2T1 843 aa11.94□□□□□ -0.5
CCNC-206ENST00000486428 KDM4FA0A1W2PPD8 638 aa11.92□□□□□ -0.5
CCNC-206ENST00000486428 TK2O00142 265 aa11.92□□□□□ -0.5
CCNC-206ENST00000486428 ADGRD1Q6QNK2 874 aa11.92□□□□□ -0.5
CCNC-206ENST00000486428 STAC3Q96MF2 364 aa11.91□□□□□ -0.5
CCNC-206ENST00000486428 OXER1Q8TDS5 423 aa11.9□□□□□ -0.5
CCNC-206ENST00000486428 UPF1Q92900 1129 aaKnown RBP eCLIP11.89□□□□□ -0.51
CCNC-206ENST00000486428 POTEEQ6S8J3 1075 aa11.88□□□□□ -0.51
CCNC-206ENST00000486428 GTPBP6O43824 516 aaPredicted RBP11.86□□□□□ -0.51
CCNC-206ENST00000486428 DDX27Q96GQ7 796 aaKnown RBP11.86□□□□□ -0.51
CCNC-206ENST00000486428 HCSTQ9UBK5 93 aa11.85□□□□□ -0.51
CCNC-206ENST00000486428 MYO15BQ96JP2 1530 aa11.85□□□□□ -0.51
CCNC-206ENST00000486428 ZNF454Q8N9F8 522 aa11.84□□□□□ -0.51
CCNC-206ENST00000486428 LARP6Q9BRS8 491 aaKnown RBP11.83□□□□□ -0.52
CCNC-206ENST00000486428 PSEN2P49810 448 aa11.82□□□□□ -0.52
CCNC-206ENST00000486428 KCNK17Q96T54 332 aa11.82□□□□□ -0.52
CCNC-206ENST00000486428 NCKAP5LQ9HCH0 1330 aa11.82□□□□□ -0.52
CCNC-206ENST00000486428 PTPREP23469 700 aa11.79□□□□□ -0.52
CCNC-206ENST00000486428 MAP3K9P80192 1104 aa11.79□□□□□ -0.52
CCNC-206ENST00000486428 EIF4G1Q04637 1599 aaKnown RBP11.79□□□□□ -0.52
CCNC-206ENST00000486428 DMRTA1Q5VZB9 504 aa11.78□□□□□ -0.52
CCNC-206ENST00000486428 JPH4Q96JJ6 628 aa11.78□□□□□ -0.52
CCNC-206ENST00000486428 BCL2L12Q9HB09 334 aa11.78□□□□□ -0.52
CCNC-206ENST00000486428 MFSD10Q14728 455 aa11.77□□□□□ -0.53
CCNC-206ENST00000486428 HRO43593 1189 aa11.76□□□□□ -0.53
CCNC-206ENST00000486428 EVI5O60447 810 aa11.76□□□□□ -0.53
CCNC-206ENST00000486428 SHROOM4Q9ULL8 1493 aa11.76□□□□□ -0.53
CCNC-206ENST00000486428 FOSBP53539 338 aa11.75□□□□□ -0.53
CCNC-206ENST00000486428 SLC4A5Q9BY07 1137 aa11.74□□□□□ -0.53
CCNC-206ENST00000486428 ANO8Q9HCE9 1232 aaPredicted RBP11.74□□□□□ -0.53
CCNC-206ENST00000486428 ZDHHC16Q969W1 377 aa11.73□□□□□ -0.53
CCNC-206ENST00000486428 VPS9D1Q9Y2B5 631 aa11.71□□□□□ -0.53
CCNC-206ENST00000486428 KCTD12Q96CX2 325 aaKnown RBP11.7□□□□□ -0.54
CCNC-206ENST00000486428 PLA2G2EQ9NZK7 142 aa11.7□□□□□ -0.54
CCNC-206ENST00000486428 GOLGA8CPA6NN73 597 aa11.69□□□□□ -0.54
CCNC-206ENST00000486428 NBPF3Q9H094 633 aa11.69□□□□□ -0.54
CCNC-206ENST00000486428 BBXQ8WY36 941 aaPredicted RBP11.67□□□□□ -0.54
CCNC-206ENST00000486428 FBXW7Q969H0 707 aa11.66□□□□□ -0.54
CCNC-206ENST00000486428 SCRIBQ14160 1630 aa11.66□□□□□ -0.54
CCNC-206ENST00000486428 MRPL50Q8N5N7 158 aaKnown RBP11.65□□□□□ -0.54
CCNC-206ENST00000486428 ZBED2Q9BTP6 218 aa11.63□□□□□ -0.55
CCNC-206ENST00000486428 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms