RNA–Protein interactions for RNA: ENST00000486400.1

MMP23B-206, Transcript of matrix metallopeptidase 23B, humanhuman

TSL 2

Gene MMP23B, Length 485 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP23B-206ENST00000486400 ATP1B4Q9UN42 357 aaPredicted RBP28.55■■■□□ 2.16
MMP23B-206ENST00000486400 ARHGAP35Q9NRY4 1499 aa28.54■■■□□ 2.16
MMP23B-206ENST00000486400 SCAPERQ9BY12 1400 aa28.54■■■□□ 2.16
MMP23B-206ENST00000486400 CDK11AQ9UQ88 783 aaPredicted RBP28.51■■■□□ 2.15
MMP23B-206ENST00000486400 FER1L4A9Z1Z3 1794 aa28.51■■■□□ 2.15
MMP23B-206ENST00000486400 KIF14Q15058 1648 aa28.48■■■□□ 2.15
MMP23B-206ENST00000486400 FBXO41Q8TF61 875 aa28.48■■■□□ 2.15
MMP23B-206ENST00000486400 EFCAB2Q5VUJ9 269 aa28.47■■■□□ 2.15
MMP23B-206ENST00000486400 LRRIQ1Q96JM4 1722 aa28.46■■■□□ 2.15
MMP23B-206ENST00000486400 CHIC1Q5VXU3 224 aa28.44■■■□□ 2.14
MMP23B-206ENST00000486400 PLPPR3Q6T4P5 718 aa28.44■■■□□ 2.14
MMP23B-206ENST00000486400 MLECQ14165 292 aa28.43■■■□□ 2.14
MMP23B-206ENST00000486400 TROQ12816 1431 aaPredicted RBP28.43■■■□□ 2.14
MMP23B-206ENST00000486400 ATP10AO60312 1499 aa28.42■■■□□ 2.14
MMP23B-206ENST00000486400 CLIP1P30622 1438 aa28.39■■■□□ 2.14
MMP23B-206ENST00000486400 C9orf84Q5VXU9 1444 aa28.39■■■□□ 2.14
MMP23B-206ENST00000486400 ARHGAP5Q13017 1502 aa28.38■■■□□ 2.13
MMP23B-206ENST00000486400 HSPA2P54652 639 aa28.37■■■□□ 2.13
MMP23B-206ENST00000486400 ZNF518AQ6AHZ1 1483 aa28.37■■■□□ 2.13
MMP23B-206ENST00000486400 ARHGEF12Q9NZN5 1544 aa28.36■■■□□ 2.13
MMP23B-206ENST00000486400 CDC42BPBQ9Y5S2 1711 aa28.35■■■□□ 2.13
MMP23B-206ENST00000486400 KDM5CP41229 1560 aa28.33■■■□□ 2.13
MMP23B-206ENST00000486400 PREX1Q8TCU6 1659 aa28.29■■■□□ 2.12
MMP23B-206ENST00000486400 AFAP1Q8N556 730 aa28.29■■■□□ 2.12
MMP23B-206ENST00000486400 PREX2Q70Z35 1606 aa28.28■■■□□ 2.12
MMP23B-206ENST00000486400 CCDC18Q5T9S5 1454 aa28.27■■■□□ 2.12
MMP23B-206ENST00000486400 SETD1BQ9UPS6 1966 aaKnown RBP28.26■■■□□ 2.11
MMP23B-206ENST00000486400 MYT1LQ9UL68 1186 aa28.26■■■□□ 2.11
MMP23B-206ENST00000486400 CASKIN1Q8WXD9 1431 aa28.26■■■□□ 2.11
MMP23B-206ENST00000486400 DIP2CQ9Y2E4 1556 aa28.25■■■□□ 2.11
MMP23B-206ENST00000486400 REREQ9P2R6 1566 aa28.24■■■□□ 2.11
MMP23B-206ENST00000486400 ABCA6Q8N139 1617 aa28.22■■■□□ 2.11
MMP23B-206ENST00000486400 ITSN2Q9NZM3 1697 aa28.22■■■□□ 2.11
MMP23B-206ENST00000486400 CDC42BPAQ5VT25 1732 aa28.21■■■□□ 2.11
MMP23B-206ENST00000486400 ABCC1P33527 1531 aa28.21■■■□□ 2.11
MMP23B-206ENST00000486400 MLH3Q9UHC1 1453 aa28.21■■■□□ 2.11
MMP23B-206ENST00000486400 CEBPAP49715 358 aaPredicted RBP28.19■■■□□ 2.1
MMP23B-206ENST00000486400 TRAPPC8Q9Y2L5 1435 aa28.16■■■□□ 2.1
MMP23B-206ENST00000486400 FYCO1Q9BQS8 1478 aa28.15■■■□□ 2.1
MMP23B-206ENST00000486400 KIDINS220Q9ULH0 1771 aa28.13■■■□□ 2.09
MMP23B-206ENST00000486400 C3P01024 1663 aa28.13■■■□□ 2.09
MMP23B-206ENST00000486400 AGLP35573 1532 aa28.13■■■□□ 2.09
MMP23B-206ENST00000486400 STRCQ7RTU9 1775 aa28.11■■■□□ 2.09
MMP23B-206ENST00000486400 CERKQ8TCT0 537 aa28.11■■■□□ 2.09
MMP23B-206ENST00000486400 UHRF1BP1Q6BDS2 1440 aa28.1■■■□□ 2.09
MMP23B-206ENST00000486400 ESF1Q9H501 851 aaKnown RBP28.06■■■□□ 2.08
MMP23B-206ENST00000486400 SAMD9LQ8IVG5 1584 aa28.04■■■□□ 2.08
MMP23B-206ENST00000486400 DMRT2Q9Y5R5 561 aa28.04■■■□□ 2.08
MMP23B-206ENST00000486400 ZNF777Q9ULD5 760 aaPredicted RBP28.01■■■□□ 2.07
MMP23B-206ENST00000486400 SYCP2Q9BX26 1530 aa28■■■□□ 2.07
MMP23B-206ENST00000486400 GPATCH8Q9UKJ3 1502 aaKnown RBP28■■■□□ 2.07
MMP23B-206ENST00000486400 CNTLNQ9NXG0 1405 aa27.99■■■□□ 2.07
MMP23B-206ENST00000486400 SUPT6HQ7KZ85 1726 aaKnown RBP27.97■■■□□ 2.07
MMP23B-206ENST00000486400 MROH2AA6NES4 1674 aa27.96■■■□□ 2.07
MMP23B-206ENST00000486400 SPAG9O60271 1321 aaKnown RBP27.94■■■□□ 2.06
MMP23B-206ENST00000486400 HNRNPMP52272 730 aaKnown RBP eCLIP27.93■■■□□ 2.06
MMP23B-206ENST00000486400 PLEKHH2Q8IVE3 1493 aa27.92■■■□□ 2.06
MMP23B-206ENST00000486400 ATP7AQ04656 1500 aa27.92■■■□□ 2.06
MMP23B-206ENST00000486400 KIAA1107Q9UPP5 1409 aa27.92■■■□□ 2.06
MMP23B-206ENST00000486400 PTPRTO14522 1441 aa27.91■■■□□ 2.06
MMP23B-206ENST00000486400 CFDP1Q9UEE9 299 aaPredicted RBP27.9■■■□□ 2.06
MMP23B-206ENST00000486400 INO80Q9ULG1 1556 aaPredicted RBP27.9■■■□□ 2.06
MMP23B-206ENST00000486400 CCNB3Q8WWL7 1395 aa27.89■■■□□ 2.06
MMP23B-206ENST00000486400 MTUS2Q5JR59 1369 aa27.87■■■□□ 2.05
MMP23B-206ENST00000486400 NPATQ14207 1427 aa27.86■■■□□ 2.05
MMP23B-206ENST00000486400 CLTCQ00610 1675 aaKnown RBP27.86■■■□□ 2.05
MMP23B-206ENST00000486400 PLXNC1O60486 1568 aa27.86■■■□□ 2.05
MMP23B-206ENST00000486400 ZMYM3Q14202 1370 aa27.84■■■□□ 2.05
MMP23B-206ENST00000486400 NCOA1Q15788 1441 aa27.84■■■□□ 2.05
MMP23B-206ENST00000486400 A2MP01023 1474 aa27.83■■■□□ 2.05
MMP23B-206ENST00000486400 ADGBQ8N7X0 1667 aa27.83■■■□□ 2.05
MMP23B-206ENST00000486400 TIAM1Q13009 1591 aa27.8■■■□□ 2.04
MMP23B-206ENST00000486400 CAMSAP1Q5T5Y3 1602 aa27.8■■■□□ 2.04
MMP23B-206ENST00000486400 EHBP1L1Q8N3D4 1523 aa27.78■■■□□ 2.04
MMP23B-206ENST00000486400 LTBP4Q8N2S1 1624 aa27.77■■■□□ 2.04
MMP23B-206ENST00000486400 ZNF142P52746 1687 aaPredicted RBP27.76■■■□□ 2.03
MMP23B-206ENST00000486400 MYO3AQ8NEV4 1616 aa27.75■■■□□ 2.03
MMP23B-206ENST00000486400 GGT6Q6P531 493 aa27.74■■■□□ 2.03
MMP23B-206ENST00000486400 ZNF644Q9H582 1327 aaPredicted RBP27.73■■■□□ 2.03
MMP23B-206ENST00000486400 MBD5Q9P267 1494 aa27.71■■■□□ 2.03
MMP23B-206ENST00000486400 CEP162Q5TB80 1403 aa27.71■■■□□ 2.03
MMP23B-206ENST00000486400 PPP6R1Q9UPN7 881 aa27.71■■■□□ 2.03
MMP23B-206ENST00000486400 PTPRKQ15262 1439 aa27.7■■■□□ 2.03
MMP23B-206ENST00000486400 IQSEC2Q5JU85 1478 aa27.7■■■□□ 2.02
MMP23B-206ENST00000486400 CEP170BQ9Y4F5 1589 aaPredicted RBP27.69■■■□□ 2.02
MMP23B-206ENST00000486400 RTEL1-TNFRSF6BF6WH68 1400 aa27.67■■■□□ 2.02
MMP23B-206ENST00000486400 NCKAP5LQ9HCH0 1330 aa27.66■■■□□ 2.02
MMP23B-206ENST00000486400 PLA2R1Q13018 1463 aa27.65■■■□□ 2.02
MMP23B-206ENST00000486400 PKD2Q13563 968 aa27.63■■■□□ 2.01
MMP23B-206ENST00000486400 DHX29Q7Z478 1369 aaKnown RBP27.62■■■□□ 2.01
MMP23B-206ENST00000486400 DISP3Q9P2K9 1392 aa27.6■■■□□ 2.01
MMP23B-206ENST00000486400 TCOF1Q13428 1488 aaKnown RBP27.6■■■□□ 2.01
MMP23B-206ENST00000486400 CCDC141Q6ZP82 1450 aa27.6■■■□□ 2.01
MMP23B-206ENST00000486400 NCOA2Q15596 1464 aa27.59■■■□□ 2.01
MMP23B-206ENST00000486400 CAMSAP2Q08AD1 1489 aa27.58■■■□□ 2.01
MMP23B-206ENST00000486400 ZNF335Q9H4Z2 1342 aaPredicted RBP27.57■■■□□ 2
MMP23B-206ENST00000486400 DNMT1P26358 1616 aaKnown RBP27.56■■■□□ 2
MMP23B-206ENST00000486400 RSPH4AQ5TD94 716 aa27.56■■■□□ 2
MMP23B-206ENST00000486400 A2ML1A8K2U0 1454 aa27.56■■■□□ 2
MMP23B-206ENST00000486400 KIF3BO15066 747 aa27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms