RNA–Protein interactions for RNA: ENST00000485502.1

CCL19-203, Transcript of C-C motif chemokine ligand 19, humanhuman

TSL 2

Gene CCL19, Length 481 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL19-203ENST00000485502 AKNAQ7Z591 1439 aa17.25■□□□□ 0.35
CCL19-203ENST00000485502 HECW1Q76N89 1606 aa17.25■□□□□ 0.35
CCL19-203ENST00000485502 FER1L4A9Z1Z3 1794 aa17.24■□□□□ 0.35
CCL19-203ENST00000485502 LRRIQ1Q96JM4 1722 aa17.23■□□□□ 0.35
CCL19-203ENST00000485502 ZFYVE16Q7Z3T8 1539 aa17.22■□□□□ 0.35
CCL19-203ENST00000485502 VPS8Q8N3P4 1428 aa17.21■□□□□ 0.35
CCL19-203ENST00000485502 SIGLEC1Q9BZZ2 1709 aa17.21■□□□□ 0.35
CCL19-203ENST00000485502 SETD1BQ9UPS6 1966 aaKnown RBP17.21■□□□□ 0.35
CCL19-203ENST00000485502 PLPPR3Q6T4P5 718 aa17.21■□□□□ 0.35
CCL19-203ENST00000485502 KIF14Q15058 1648 aa17.2■□□□□ 0.34
CCL19-203ENST00000485502 PREX1Q8TCU6 1659 aa17.2■□□□□ 0.34
CCL19-203ENST00000485502 TRIM26Q12899 539 aaPredicted RBP17.19■□□□□ 0.34
CCL19-203ENST00000485502 CDK11AQ9UQ88 783 aaPredicted RBP17.19■□□□□ 0.34
CCL19-203ENST00000485502 PLCH2O75038 1416 aa17.16■□□□□ 0.34
CCL19-203ENST00000485502 SCAPERQ9BY12 1400 aa17.16■□□□□ 0.34
CCL19-203ENST00000485502 CERKQ8TCT0 537 aa17.16■□□□□ 0.34
CCL19-203ENST00000485502 ARHGEF12Q9NZN5 1544 aa17.16■□□□□ 0.34
CCL19-203ENST00000485502 MLECQ14165 292 aa17.15■□□□□ 0.34
CCL19-203ENST00000485502 MYO5CQ9NQX4 1742 aa17.15■□□□□ 0.34
CCL19-203ENST00000485502 YEATS2Q9ULM3 1422 aa17.14■□□□□ 0.33
CCL19-203ENST00000485502 EFCAB2Q5VUJ9 269 aa17.14■□□□□ 0.33
CCL19-203ENST00000485502 TROQ12816 1431 aaPredicted RBP17.13■□□□□ 0.33
CCL19-203ENST00000485502 HSPA2P54652 639 aa17.12■□□□□ 0.33
CCL19-203ENST00000485502 MYT1LQ9UL68 1186 aa17.12■□□□□ 0.33
CCL19-203ENST00000485502 CASKIN1Q8WXD9 1431 aa17.11■□□□□ 0.33
CCL19-203ENST00000485502 ARHGAP5Q13017 1502 aa17.11■□□□□ 0.33
CCL19-203ENST00000485502 STRCQ7RTU9 1775 aa17.1■□□□□ 0.33
CCL19-203ENST00000485502 APLP2Q06481 763 aa17.1■□□□□ 0.33
CCL19-203ENST00000485502 ATP10AO60312 1499 aa17.1■□□□□ 0.33
CCL19-203ENST00000485502 AFAP1Q8N556 730 aa17.09■□□□□ 0.33
CCL19-203ENST00000485502 C9orf84Q5VXU9 1444 aa17.09■□□□□ 0.33
CCL19-203ENST00000485502 REREQ9P2R6 1566 aa17.07■□□□□ 0.32
CCL19-203ENST00000485502 CDC42BPBQ9Y5S2 1711 aa17.07■□□□□ 0.32
CCL19-203ENST00000485502 PCGF6Q9BYE7 350 aa17.06■□□□□ 0.32
CCL19-203ENST00000485502 ZNF777Q9ULD5 760 aaPredicted RBP17.06■□□□□ 0.32
CCL19-203ENST00000485502 DMRT2Q9Y5R5 561 aa17.06■□□□□ 0.32
CCL19-203ENST00000485502 KDM5CP41229 1560 aa17.05■□□□□ 0.32
CCL19-203ENST00000485502 CCDC18Q5T9S5 1454 aa17.04■□□□□ 0.32
CCL19-203ENST00000485502 ZNF518AQ6AHZ1 1483 aa17.03■□□□□ 0.32
CCL19-203ENST00000485502 FYCO1Q9BQS8 1478 aa17.02■□□□□ 0.32
CCL19-203ENST00000485502 IQSEC2Q5JU85 1478 aa17.01■□□□□ 0.31
CCL19-203ENST00000485502 PTPRTO14522 1441 aa17■□□□□ 0.31
CCL19-203ENST00000485502 CDC42BPAQ5VT25 1732 aa17■□□□□ 0.31
CCL19-203ENST00000485502 MAP3K1Q13233 1512 aa17■□□□□ 0.31
CCL19-203ENST00000485502 UHRF1BP1Q6BDS2 1440 aa16.99■□□□□ 0.31
CCL19-203ENST00000485502 TRAPPC8Q9Y2L5 1435 aa16.99■□□□□ 0.31
CCL19-203ENST00000485502 PREX2Q70Z35 1606 aa16.99■□□□□ 0.31
CCL19-203ENST00000485502 C3P01024 1663 aa16.98■□□□□ 0.31
CCL19-203ENST00000485502 SOCS7O14512 581 aa16.98■□□□□ 0.31
CCL19-203ENST00000485502 AGLP35573 1532 aa16.97■□□□□ 0.31
CCL19-203ENST00000485502 CEBPAP49715 358 aaPredicted RBP16.97■□□□□ 0.31
CCL19-203ENST00000485502 DIP2CQ9Y2E4 1556 aa16.97■□□□□ 0.31
CCL19-203ENST00000485502 HNRNPMP52272 730 aaKnown RBP eCLIP16.96■□□□□ 0.31
CCL19-203ENST00000485502 MLH3Q9UHC1 1453 aa16.95■□□□□ 0.3
CCL19-203ENST00000485502 DISP3Q9P2K9 1392 aa16.95■□□□□ 0.3
CCL19-203ENST00000485502 ITSN2Q9NZM3 1697 aa16.94■□□□□ 0.3
CCL19-203ENST00000485502 SPATA31D1Q6ZQQ2 1576 aa16.94■□□□□ 0.3
CCL19-203ENST00000485502 MTUS2Q5JR59 1369 aa16.94■□□□□ 0.3
CCL19-203ENST00000485502 LTBP4Q8N2S1 1624 aa16.93■□□□□ 0.3
CCL19-203ENST00000485502 ABCC1P33527 1531 aa16.93■□□□□ 0.3
CCL19-203ENST00000485502 ABCA6Q8N139 1617 aa16.92■□□□□ 0.3
CCL19-203ENST00000485502 GPATCH8Q9UKJ3 1502 aaKnown RBP16.92■□□□□ 0.3
CCL19-203ENST00000485502 CCNB3Q8WWL7 1395 aa16.91■□□□□ 0.3
CCL19-203ENST00000485502 CFDP1Q9UEE9 299 aaPredicted RBP16.91■□□□□ 0.3
CCL19-203ENST00000485502 MROH2AA6NES4 1674 aa16.91■□□□□ 0.3
CCL19-203ENST00000485502 SAMD9LQ8IVG5 1584 aa16.9■□□□□ 0.3
CCL19-203ENST00000485502 ILDR2Q71H61 639 aa16.9■□□□□ 0.3
CCL19-203ENST00000485502 ZNF644Q9H582 1327 aaPredicted RBP16.9■□□□□ 0.3
CCL19-203ENST00000485502 CNTLNQ9NXG0 1405 aa16.89■□□□□ 0.29
CCL19-203ENST00000485502 SYCP2Q9BX26 1530 aa16.89■□□□□ 0.29
CCL19-203ENST00000485502 TIAM1Q13009 1591 aa16.89■□□□□ 0.29
CCL19-203ENST00000485502 KIDINS220Q9ULH0 1771 aa16.88■□□□□ 0.29
CCL19-203ENST00000485502 NCOA1Q15788 1441 aa16.87■□□□□ 0.29
CCL19-203ENST00000485502 SPAG9O60271 1321 aaKnown RBP16.86■□□□□ 0.29
CCL19-203ENST00000485502 NPATQ14207 1427 aa16.86■□□□□ 0.29
CCL19-203ENST00000485502 ESF1Q9H501 851 aaKnown RBP16.84■□□□□ 0.29
CCL19-203ENST00000485502 SUPT6HQ7KZ85 1726 aaKnown RBP16.83■□□□□ 0.28
CCL19-203ENST00000485502 ZNF142P52746 1687 aaPredicted RBP16.82■□□□□ 0.28
CCL19-203ENST00000485502 EHBP1L1Q8N3D4 1523 aa16.8■□□□□ 0.28
CCL19-203ENST00000485502 PPARGC1BQ86YN6 1023 aaKnown RBP16.79■□□□□ 0.28
CCL19-203ENST00000485502 CAMSAP1Q5T5Y3 1602 aa16.78■□□□□ 0.28
CCL19-203ENST00000485502 ATP7AQ04656 1500 aa16.78■□□□□ 0.28
CCL19-203ENST00000485502 PLA2R1Q13018 1463 aa16.78■□□□□ 0.28
CCL19-203ENST00000485502 GGT6Q6P531 493 aa16.77■□□□□ 0.28
CCL19-203ENST00000485502 LRRC9Q6ZRR7 1453 aa16.76■□□□□ 0.27
CCL19-203ENST00000485502 KIAA1107Q9UPP5 1409 aa16.76■□□□□ 0.27
CCL19-203ENST00000485502 NCOA2Q15596 1464 aa16.75■□□□□ 0.27
CCL19-203ENST00000485502 PLEKHH2Q8IVE3 1493 aa16.75■□□□□ 0.27
CCL19-203ENST00000485502 KANK4Q5T7N3 995 aaPredicted RBP16.75■□□□□ 0.27
CCL19-203ENST00000485502 MYO3AQ8NEV4 1616 aa16.74■□□□□ 0.27
CCL19-203ENST00000485502 PLXNC1O60486 1568 aa16.73■□□□□ 0.27
CCL19-203ENST00000485502 INO80Q9ULG1 1556 aaPredicted RBP16.73■□□□□ 0.27
CCL19-203ENST00000485502 A2MP01023 1474 aa16.73■□□□□ 0.27
CCL19-203ENST00000485502 TCOF1Q13428 1488 aaKnown RBP16.73■□□□□ 0.27
CCL19-203ENST00000485502 HRCP23327 699 aa16.72■□□□□ 0.27
CCL19-203ENST00000485502 ZEB1P37275 1124 aaPredicted RBP16.72■□□□□ 0.27
CCL19-203ENST00000485502 MBD5Q9P267 1494 aa16.72■□□□□ 0.27
CCL19-203ENST00000485502 ZMYM3Q14202 1370 aa16.71■□□□□ 0.27
CCL19-203ENST00000485502 CEP170BQ9Y4F5 1589 aaPredicted RBP16.71■□□□□ 0.27
CCL19-203ENST00000485502 CLTCQ00610 1675 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms