RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 EFCAB2Q5VUJ9 269 aa21.6■■□□□ 1.05
HDAC6-227ENST00000485102 ARHGAP35Q9NRY4 1499 aa21.59■■□□□ 1.05
HDAC6-227ENST00000485102 SIGLEC1Q9BZZ2 1709 aa21.56■■□□□ 1.04
HDAC6-227ENST00000485102 ATP10AO60312 1499 aa21.55■■□□□ 1.04
HDAC6-227ENST00000485102 MYO5CQ9NQX4 1742 aa21.53■■□□□ 1.04
HDAC6-227ENST00000485102 TROQ12816 1431 aaPredicted RBP21.53■■□□□ 1.04
HDAC6-227ENST00000485102 CHIC1Q5VXU3 224 aa21.52■■□□□ 1.04
HDAC6-227ENST00000485102 ATP1B4Q9UN42 357 aaPredicted RBP21.52■■□□□ 1.04
HDAC6-227ENST00000485102 C9orf84Q5VXU9 1444 aa21.51■■□□□ 1.03
HDAC6-227ENST00000485102 ARHGEF12Q9NZN5 1544 aa21.5■■□□□ 1.03
HDAC6-227ENST00000485102 ZNF518AQ6AHZ1 1483 aa21.49■■□□□ 1.03
HDAC6-227ENST00000485102 KIF14Q15058 1648 aa21.48■■□□□ 1.03
HDAC6-227ENST00000485102 HSPA2P54652 639 aa21.48■■□□□ 1.03
HDAC6-227ENST00000485102 FER1L4A9Z1Z3 1794 aa21.48■■□□□ 1.03
HDAC6-227ENST00000485102 CLIP1P30622 1438 aa21.47■■□□□ 1.03
HDAC6-227ENST00000485102 MLECQ14165 292 aa21.47■■□□□ 1.03
HDAC6-227ENST00000485102 KDM5CP41229 1560 aa21.47■■□□□ 1.03
HDAC6-227ENST00000485102 AFAP1Q8N556 730 aa21.45■■□□□ 1.02
HDAC6-227ENST00000485102 EHMT2Q96KQ7 1210 aa21.44■■□□□ 1.02
HDAC6-227ENST00000485102 ARHGAP5Q13017 1502 aa21.43■■□□□ 1.02
HDAC6-227ENST00000485102 SETD1BQ9UPS6 1966 aaKnown RBP21.43■■□□□ 1.02
HDAC6-227ENST00000485102 LRRIQ1Q96JM4 1722 aa21.41■■□□□ 1.02
HDAC6-227ENST00000485102 REREQ9P2R6 1566 aa21.41■■□□□ 1.02
HDAC6-227ENST00000485102 MLH3Q9UHC1 1453 aa21.41■■□□□ 1.02
HDAC6-227ENST00000485102 CASKIN1Q8WXD9 1431 aa21.4■■□□□ 1.02
HDAC6-227ENST00000485102 PLPPR3Q6T4P5 718 aa21.4■■□□□ 1.02
HDAC6-227ENST00000485102 CCDC18Q5T9S5 1454 aa21.39■■□□□ 1.01
HDAC6-227ENST00000485102 CDC42BPBQ9Y5S2 1711 aa21.38■■□□□ 1.01
HDAC6-227ENST00000485102 PREX1Q8TCU6 1659 aa21.36■■□□□ 1.01
HDAC6-227ENST00000485102 DIP2CQ9Y2E4 1556 aa21.36■■□□□ 1.01
HDAC6-227ENST00000485102 CEBPAP49715 358 aaPredicted RBP21.35■■□□□ 1.01
HDAC6-227ENST00000485102 AGLP35573 1532 aa21.34■■□□□ 1.01
HDAC6-227ENST00000485102 PREX2Q70Z35 1606 aa21.34■■□□□ 1.01
HDAC6-227ENST00000485102 CERKQ8TCT0 537 aa21.34■■□□□ 1.01
HDAC6-227ENST00000485102 TRAPPC8Q9Y2L5 1435 aa21.32■■□□□ 1
HDAC6-227ENST00000485102 DMRT2Q9Y5R5 561 aa21.32■■□□□ 1
HDAC6-227ENST00000485102 ABCC1P33527 1531 aa21.32■■□□□ 1
HDAC6-227ENST00000485102 MYT1LQ9UL68 1186 aa21.3■■□□□ 1
HDAC6-227ENST00000485102 ABCA6Q8N139 1617 aa21.29■■□□□ 1
HDAC6-227ENST00000485102 UHRF1BP1Q6BDS2 1440 aa21.29■■□□□ 1
HDAC6-227ENST00000485102 FYCO1Q9BQS8 1478 aa21.28■■□□□ 1
HDAC6-227ENST00000485102 ITSN2Q9NZM3 1697 aa21.27■■□□□ 1
HDAC6-227ENST00000485102 CDC42BPAQ5VT25 1732 aa21.26■□□□□ 0.99
HDAC6-227ENST00000485102 STRCQ7RTU9 1775 aa21.25■□□□□ 0.99
HDAC6-227ENST00000485102 KIDINS220Q9ULH0 1771 aa21.25■□□□□ 0.99
HDAC6-227ENST00000485102 CNTLNQ9NXG0 1405 aa21.24■□□□□ 0.99
HDAC6-227ENST00000485102 C3P01024 1663 aa21.23■□□□□ 0.99
HDAC6-227ENST00000485102 ESF1Q9H501 851 aaKnown RBP21.22■□□□□ 0.99
HDAC6-227ENST00000485102 GPATCH8Q9UKJ3 1502 aaKnown RBP21.22■□□□□ 0.99
HDAC6-227ENST00000485102 PTPRTO14522 1441 aa21.21■□□□□ 0.99
HDAC6-227ENST00000485102 SAMD9LQ8IVG5 1584 aa21.2■□□□□ 0.98
HDAC6-227ENST00000485102 KIAA1107Q9UPP5 1409 aa21.2■□□□□ 0.98
HDAC6-227ENST00000485102 SPAG9O60271 1321 aaKnown RBP21.16■□□□□ 0.98
HDAC6-227ENST00000485102 PLEKHH2Q8IVE3 1493 aa21.15■□□□□ 0.98
HDAC6-227ENST00000485102 NPATQ14207 1427 aa21.15■□□□□ 0.98
HDAC6-227ENST00000485102 ZNF777Q9ULD5 760 aaPredicted RBP21.15■□□□□ 0.98
HDAC6-227ENST00000485102 HNRNPMP52272 730 aaKnown RBP eCLIP21.14■□□□□ 0.97
HDAC6-227ENST00000485102 CFDP1Q9UEE9 299 aaPredicted RBP21.14■□□□□ 0.97
HDAC6-227ENST00000485102 SYCP2Q9BX26 1530 aa21.14■□□□□ 0.97
HDAC6-227ENST00000485102 MROH2AA6NES4 1674 aa21.13■□□□□ 0.97
HDAC6-227ENST00000485102 ZMYM3Q14202 1370 aa21.12■□□□□ 0.97
HDAC6-227ENST00000485102 NCOA1Q15788 1441 aa21.11■□□□□ 0.97
HDAC6-227ENST00000485102 CCNB3Q8WWL7 1395 aa21.1■□□□□ 0.97
HDAC6-227ENST00000485102 PPP6R1Q9UPN7 881 aa21.1■□□□□ 0.97
HDAC6-227ENST00000485102 ATP7AQ04656 1500 aa21.09■□□□□ 0.97
HDAC6-227ENST00000485102 PLXNC1O60486 1568 aa21.09■□□□□ 0.97
HDAC6-227ENST00000485102 MTUS2Q5JR59 1369 aa21.08■□□□□ 0.96
HDAC6-227ENST00000485102 A2MP01023 1474 aa21.07■□□□□ 0.96
HDAC6-227ENST00000485102 INO80Q9ULG1 1556 aaPredicted RBP21.07■□□□□ 0.96
HDAC6-227ENST00000485102 LTBP4Q8N2S1 1624 aa21.06■□□□□ 0.96
HDAC6-227ENST00000485102 IQSEC2Q5JU85 1478 aa21.06■□□□□ 0.96
HDAC6-227ENST00000485102 SUPT6HQ7KZ85 1726 aaKnown RBP21.05■□□□□ 0.96
HDAC6-227ENST00000485102 MBD5Q9P267 1494 aa21.02■□□□□ 0.96
HDAC6-227ENST00000485102 RTEL1-TNFRSF6BF6WH68 1400 aa21.02■□□□□ 0.96
HDAC6-227ENST00000485102 CAMSAP1Q5T5Y3 1602 aa21.01■□□□□ 0.95
HDAC6-227ENST00000485102 PTPRKQ15262 1439 aa21.01■□□□□ 0.95
HDAC6-227ENST00000485102 CEP162Q5TB80 1403 aa20.99■□□□□ 0.95
HDAC6-227ENST00000485102 PKD2Q13563 968 aa20.99■□□□□ 0.95
HDAC6-227ENST00000485102 GGT6Q6P531 493 aa20.99■□□□□ 0.95
HDAC6-227ENST00000485102 PLA2R1Q13018 1463 aa20.99■□□□□ 0.95
HDAC6-227ENST00000485102 ZNF644Q9H582 1327 aaPredicted RBP20.99■□□□□ 0.95
HDAC6-227ENST00000485102 CLTCQ00610 1675 aaKnown RBP20.99■□□□□ 0.95
HDAC6-227ENST00000485102 ADGBQ8N7X0 1667 aa20.99■□□□□ 0.95
HDAC6-227ENST00000485102 TIAM1Q13009 1591 aa20.98■□□□□ 0.95
HDAC6-227ENST00000485102 EHBP1L1Q8N3D4 1523 aa20.98■□□□□ 0.95
HDAC6-227ENST00000485102 ZNF142P52746 1687 aaPredicted RBP20.97■□□□□ 0.95
HDAC6-227ENST00000485102 RSPH4AQ5TD94 716 aa20.96■□□□□ 0.95
HDAC6-227ENST00000485102 DHX29Q7Z478 1369 aaKnown RBP20.96■□□□□ 0.95
HDAC6-227ENST00000485102 TCOF1Q13428 1488 aaKnown RBP20.94■□□□□ 0.94
HDAC6-227ENST00000485102 NCKAP5LQ9HCH0 1330 aa20.94■□□□□ 0.94
HDAC6-227ENST00000485102 CEP170BQ9Y4F5 1589 aaPredicted RBP20.93■□□□□ 0.94
HDAC6-227ENST00000485102 MYO3AQ8NEV4 1616 aa20.93■□□□□ 0.94
HDAC6-227ENST00000485102 DISP3Q9P2K9 1392 aa20.9■□□□□ 0.94
HDAC6-227ENST00000485102 FAM135AQ9P2D6 1515 aa20.89■□□□□ 0.94
HDAC6-227ENST00000485102 A2ML1A8K2U0 1454 aa20.88■□□□□ 0.93
HDAC6-227ENST00000485102 ZNF335Q9H4Z2 1342 aaPredicted RBP20.88■□□□□ 0.93
HDAC6-227ENST00000485102 CCDC141Q6ZP82 1450 aa20.88■□□□□ 0.93
HDAC6-227ENST00000485102 NCOA2Q15596 1464 aa20.86■□□□□ 0.93
HDAC6-227ENST00000485102 KIF3BO15066 747 aa20.85■□□□□ 0.93
HDAC6-227ENST00000485102 ILDR2Q71H61 639 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms