RNA–Protein interactions for RNA: ENST00000484913.5

PEX1-208, Transcript of peroxisomal biogenesis factor 1, humanhuman

TSL 2

Gene PEX1, Length 4,051 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-208ENST00000484913 POLR3GLQ9BT43 218 aa16■□□□□ 0.15
PEX1-208ENST00000484913 KIF14Q15058 1648 aa16■□□□□ 0.15
PEX1-208ENST00000484913 MPHOSPH9Q99550 1183 aa15.98■□□□□ 0.15
PEX1-208ENST00000484913 NAIPQ13075 1403 aa15.97■□□□□ 0.15
PEX1-208ENST00000484913 GPATCH8Q9UKJ3 1502 aaKnown RBP15.95■□□□□ 0.14
PEX1-208ENST00000484913 DAPK1P53355 1430 aa15.95■□□□□ 0.14
PEX1-208ENST00000484913 CAMSAP2Q08AD1 1489 aa15.94■□□□□ 0.14
PEX1-208ENST00000484913 MIA2Q96PC5 1412 aa15.94■□□□□ 0.14
PEX1-208ENST00000484913 EFCAB2Q5VUJ9 269 aa15.94■□□□□ 0.14
PEX1-208ENST00000484913 ARHGAP5Q13017 1502 aa15.94■□□□□ 0.14
PEX1-208ENST00000484913 ABCC5O15440 1437 aa15.93■□□□□ 0.14
PEX1-208ENST00000484913 HFM1A2PYH4 1435 aa15.93■□□□□ 0.14
PEX1-208ENST00000484913 KDM2AQ9Y2K7 1162 aa15.93■□□□□ 0.14
PEX1-208ENST00000484913 CLSPNQ9HAW4 1339 aa15.92■□□□□ 0.14
PEX1-208ENST00000484913 PKD2Q13563 968 aa15.92■□□□□ 0.14
PEX1-208ENST00000484913 AFAP1Q8N556 730 aa15.92■□□□□ 0.14
PEX1-208ENST00000484913 ANKRD30AQ9BXX3 1397 aa15.92■□□□□ 0.14
PEX1-208ENST00000484913 ABCA8O94911 1581 aa15.91■□□□□ 0.14
PEX1-208ENST00000484913 NUP155O75694 1391 aa15.9■□□□□ 0.14
PEX1-208ENST00000484913 RGL3Q3MIN7 710 aa15.89■□□□□ 0.14
PEX1-208ENST00000484913 SENP3Q9H4L4 574 aaPredicted RBP15.89■□□□□ 0.14
PEX1-208ENST00000484913 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.89■□□□□ 0.13
PEX1-208ENST00000484913 DDX10Q13206 875 aaKnown RBP15.87■□□□□ 0.13
PEX1-208ENST00000484913 KIF15Q9NS87 1388 aa15.86■□□□□ 0.13
PEX1-208ENST00000484913 MIER1Q8N108 512 aa15.86■□□□□ 0.13
PEX1-208ENST00000484913 ABCC2Q92887 1545 aa15.86■□□□□ 0.13
PEX1-208ENST00000484913 C9orf84Q5VXU9 1444 aa15.85■□□□□ 0.13
PEX1-208ENST00000484913 MAPKBP1O60336 1514 aa15.84■□□□□ 0.13
PEX1-208ENST00000484913 SPAG9O60271 1321 aaKnown RBP15.83■□□□□ 0.13
PEX1-208ENST00000484913 ANKRD50Q9ULJ7 1429 aa15.83■□□□□ 0.12
PEX1-208ENST00000484913 L3MBTL2Q969R5 705 aa15.82■□□□□ 0.12
PEX1-208ENST00000484913 TCOF1Q13428 1488 aaKnown RBP15.82■□□□□ 0.12
PEX1-208ENST00000484913 CLASP1Q7Z460 1538 aa15.81■□□□□ 0.12
PEX1-208ENST00000484913 KDM6BO15054 1643 aa15.81■□□□□ 0.12
PEX1-208ENST00000484913 PPP1R15AO75807 674 aaPredicted RBP15.8■□□□□ 0.12
PEX1-208ENST00000484913 CHGAP10645 457 aaKnown RBP15.79■□□□□ 0.12
PEX1-208ENST00000484913 NCOA1Q15788 1441 aa15.79■□□□□ 0.12
PEX1-208ENST00000484913 KIF3BO15066 747 aa15.79■□□□□ 0.12
PEX1-208ENST00000484913 PLPPR3Q6T4P5 718 aa15.79■□□□□ 0.12
PEX1-208ENST00000484913 AKNAQ7Z591 1439 aa15.78■□□□□ 0.12
PEX1-208ENST00000484913 GGT6Q6P531 493 aa15.78■□□□□ 0.12
PEX1-208ENST00000484913 SYCP2Q9BX26 1530 aa15.77■□□□□ 0.12
PEX1-208ENST00000484913 ASXL2Q76L83 1435 aa15.77■□□□□ 0.12
PEX1-208ENST00000484913 ABCC10Q5T3U5 1492 aa15.77■□□□□ 0.11
PEX1-208ENST00000484913 ITSN2Q9NZM3 1697 aa15.77■□□□□ 0.11
PEX1-208ENST00000484913 FAM69CQ0P6D2 419 aa15.77■□□□□ 0.11
PEX1-208ENST00000484913 TTC37Q6PGP7 1564 aa15.76■□□□□ 0.11
PEX1-208ENST00000484913 RAPGEF3O95398 923 aa15.75■□□□□ 0.11
PEX1-208ENST00000484913 SHROOM2Q13796 1616 aa15.75■□□□□ 0.11
PEX1-208ENST00000484913 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.74■□□□□ 0.11
PEX1-208ENST00000484913 ZCCHC11Q5TAX3 1644 aaKnown RBP15.74■□□□□ 0.11
PEX1-208ENST00000484913 SCAPERQ9BY12 1400 aa15.73■□□□□ 0.11
PEX1-208ENST00000484913 DCAF11Q8TEB1 546 aa15.73■□□□□ 0.11
PEX1-208ENST00000484913 CCDC141Q6ZP82 1450 aa15.73■□□□□ 0.11
PEX1-208ENST00000484913 DNMT1P26358 1616 aaKnown RBP15.73■□□□□ 0.11
PEX1-208ENST00000484913 RSPH4AQ5TD94 716 aa15.73■□□□□ 0.11
PEX1-208ENST00000484913 ROCK1Q13464 1354 aa15.72■□□□□ 0.11
PEX1-208ENST00000484913 CDC42BPAQ5VT25 1732 aa15.72■□□□□ 0.11
PEX1-208ENST00000484913 MLECQ14165 292 aa15.72■□□□□ 0.11
PEX1-208ENST00000484913 WDR7Q9Y4E6 1490 aa15.71■□□□□ 0.11
PEX1-208ENST00000484913 TRAPPC8Q9Y2L5 1435 aa15.71■□□□□ 0.11
PEX1-208ENST00000484913 PLCH2O75038 1416 aa15.68■□□□□ 0.1
PEX1-208ENST00000484913 FANCAO15360 1455 aa15.68■□□□□ 0.1
PEX1-208ENST00000484913 KDM5BQ9UGL1 1544 aa15.68■□□□□ 0.1
PEX1-208ENST00000484913 TRHP20396 242 aaPredicted RBP15.68■□□□□ 0.1
PEX1-208ENST00000484913 ADCY10Q96PN6 1610 aa15.68■□□□□ 0.1
PEX1-208ENST00000484913 HSPA5P11021 654 aaKnown RBP15.68■□□□□ 0.1
PEX1-208ENST00000484913 CD109Q6YHK3 1445 aa15.67■□□□□ 0.1
PEX1-208ENST00000484913 SAMD9LQ8IVG5 1584 aa15.67■□□□□ 0.1
PEX1-208ENST00000484913 EIF4G2P78344 907 aaKnown RBP eCLIP15.67■□□□□ 0.1
PEX1-208ENST00000484913 PLEKHH2Q8IVE3 1493 aa15.67■□□□□ 0.1
PEX1-208ENST00000484913 ADGRL1O94910 1474 aa15.65■□□□□ 0.1
PEX1-208ENST00000484913 CENPBP07199 599 aaPredicted RBP15.64■□□□□ 0.09
PEX1-208ENST00000484913 NBPF8Q3BBV2 869 aa15.64■□□□□ 0.09
PEX1-208ENST00000484913 TIMELESSQ9UNS1 1208 aa15.63■□□□□ 0.09
PEX1-208ENST00000484913 MBD5Q9P267 1494 aa15.63■□□□□ 0.09
PEX1-208ENST00000484913 CDC42BPBQ9Y5S2 1711 aa15.62■□□□□ 0.09
PEX1-208ENST00000484913 ARHGEF12Q9NZN5 1544 aa15.62■□□□□ 0.09
PEX1-208ENST00000484913 UHRF1BP1LA0JNW5 1464 aa15.62■□□□□ 0.09
PEX1-208ENST00000484913 CARD11Q9BXL7 1154 aa15.62■□□□□ 0.09
PEX1-208ENST00000484913 ANKRD30BQ9BXX2 1392 aa15.61■□□□□ 0.09
PEX1-208ENST00000484913 MYO5CQ9NQX4 1742 aa15.61■□□□□ 0.09
PEX1-208ENST00000484913 GCC2Q8IWJ2 1684 aa15.6■□□□□ 0.09
PEX1-208ENST00000484913 NUTM2DQ5VT03 806 aaPredicted RBP15.6■□□□□ 0.09
PEX1-208ENST00000484913 KIAA1107Q9UPP5 1409 aa15.6■□□□□ 0.09
PEX1-208ENST00000484913 PREX2Q70Z35 1606 aa15.6■□□□□ 0.09
PEX1-208ENST00000484913 ANP32CO43423 234 aa15.59■□□□□ 0.09
PEX1-208ENST00000484913 ARID4BQ4LE39 1312 aaPredicted RBP15.59■□□□□ 0.09
PEX1-208ENST00000484913 PZPP20742 1482 aa15.58■□□□□ 0.08
PEX1-208ENST00000484913 CCDC144AA2RUR9 1427 aa15.57■□□□□ 0.08
PEX1-208ENST00000484913 KANK1Q14678 1352 aa15.57■□□□□ 0.08
PEX1-208ENST00000484913 WASHC2CQ9Y4E1 1318 aa15.56■□□□□ 0.08
PEX1-208ENST00000484913 DENND4BO75064 1496 aaPredicted RBP15.55■□□□□ 0.08
PEX1-208ENST00000484913 SENP3-EIF4A1A0A087X0R7 540 aa15.55■□□□□ 0.08
PEX1-208ENST00000484913 ADGRL2O95490 1459 aa15.54■□□□□ 0.08
PEX1-208ENST00000484913 ACIN1Q9UKV3 1341 aaKnown RBP15.53■□□□□ 0.08
PEX1-208ENST00000484913 ADGBQ8N7X0 1667 aa15.53■□□□□ 0.08
PEX1-208ENST00000484913 ESF1Q9H501 851 aaKnown RBP15.52■□□□□ 0.08
PEX1-208ENST00000484913 STAG3Q9UJ98 1225 aa15.52■□□□□ 0.07
PEX1-208ENST00000484913 SHANK2Q9UPX8 1470 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms