RNA–Protein interactions for RNA: ENST00000484181.5

PCCB-217, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3

Gene PCCB, Length 1,683 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-217ENST00000484181 ABCC5O15440 1437 aa24.06■■□□□ 1.44
PCCB-217ENST00000484181 CDC42BPAQ5VT25 1732 aa24.02■■□□□ 1.44
PCCB-217ENST00000484181 CHIC2Q9UKJ5 165 aa24.02■■□□□ 1.44
PCCB-217ENST00000484181 UHRF1BP1LA0JNW5 1464 aa24.02■■□□□ 1.44
PCCB-217ENST00000484181 ADGBQ8N7X0 1667 aa24.02■■□□□ 1.44
PCCB-217ENST00000484181 RRP7BPQ9NSQ0 103 aa24.02■■□□□ 1.44
PCCB-217ENST00000484181 ERCC6L2Q5T890 1561 aa24.01■■□□□ 1.43
PCCB-217ENST00000484181 CROCC2H7BZ55 1655 aa24.01■■□□□ 1.43
PCCB-217ENST00000484181 SHANK2Q9UPX8 1470 aa23.98■■□□□ 1.43
PCCB-217ENST00000484181 ADGRL2O95490 1459 aa23.97■■□□□ 1.43
PCCB-217ENST00000484181 ZNF644Q9H582 1327 aaPredicted RBP23.97■■□□□ 1.43
PCCB-217ENST00000484181 PREX2Q70Z35 1606 aa23.95■■□□□ 1.42
PCCB-217ENST00000484181 ZNF777Q9ULD5 760 aaPredicted RBP23.94■■□□□ 1.42
PCCB-217ENST00000484181 ANKRD30AQ9BXX3 1397 aa23.92■■□□□ 1.42
PCCB-217ENST00000484181 ARHGEF5Q12774 1597 aa23.91■■□□□ 1.42
PCCB-217ENST00000484181 TRIM52Q96A61 297 aa23.91■■□□□ 1.42
PCCB-217ENST00000484181 KDM5BQ9UGL1 1544 aa23.9■■□□□ 1.42
PCCB-217ENST00000484181 NEUROD1Q13562 356 aa23.9■■□□□ 1.42
PCCB-217ENST00000484181 TONSLQ96HA7 1378 aa23.89■■□□□ 1.42
PCCB-217ENST00000484181 ZCCHC11Q5TAX3 1644 aaKnown RBP23.89■■□□□ 1.41
PCCB-217ENST00000484181 NCOA1Q15788 1441 aa23.89■■□□□ 1.41
PCCB-217ENST00000484181 SIN3AQ96ST3 1273 aa23.88■■□□□ 1.41
PCCB-217ENST00000484181 KDM6BO15054 1643 aa23.88■■□□□ 1.41
PCCB-217ENST00000484181 RSPH4AQ5TD94 716 aa23.86■■□□□ 1.41
PCCB-217ENST00000484181 PLEKHH2Q8IVE3 1493 aa23.86■■□□□ 1.41
PCCB-217ENST00000484181 C9orf84Q5VXU9 1444 aa23.84■■□□□ 1.41
PCCB-217ENST00000484181 MYO5CQ9NQX4 1742 aa23.84■■□□□ 1.41
PCCB-217ENST00000484181 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.84■■□□□ 1.413e-8■■■□□ 16.7
PCCB-217ENST00000484181 TTC37Q6PGP7 1564 aa23.83■■□□□ 1.41
PCCB-217ENST00000484181 CCDC141Q6ZP82 1450 aa23.83■■□□□ 1.41
PCCB-217ENST00000484181 ARHGAP5Q13017 1502 aa23.83■■□□□ 1.4
PCCB-217ENST00000484181 CDC42BPBQ9Y5S2 1711 aa23.83■■□□□ 1.4
PCCB-217ENST00000484181 TSPY4P0CV99 314 aa23.83■■□□□ 1.4
PCCB-217ENST00000484181 TSPY10P0CW01 314 aa23.83■■□□□ 1.4
PCCB-217ENST00000484181 SAMD9LQ8IVG5 1584 aa23.82■■□□□ 1.4
PCCB-217ENST00000484181 MPHOSPH9Q99550 1183 aa23.8■■□□□ 1.4
PCCB-217ENST00000484181 MBD5Q9P267 1494 aa23.77■■□□□ 1.4
PCCB-217ENST00000484181 OSCARQ8IYS5 282 aa23.77■■□□□ 1.4
PCCB-217ENST00000484181 ANKRD50Q9ULJ7 1429 aa23.77■■□□□ 1.4
PCCB-217ENST00000484181 KIAA1107Q9UPP5 1409 aa23.76■■□□□ 1.39
PCCB-217ENST00000484181 PPP1R15AO75807 674 aaPredicted RBP23.76■■□□□ 1.39
PCCB-217ENST00000484181 MAST1Q9Y2H9 1570 aa23.74■■□□□ 1.39
PCCB-217ENST00000484181 DENND4BO75064 1496 aaPredicted RBP23.74■■□□□ 1.39
PCCB-217ENST00000484181 ARAP3Q8WWN8 1544 aa23.73■■□□□ 1.39
PCCB-217ENST00000484181 PLCH2O75038 1416 aa23.72■■□□□ 1.39
PCCB-217ENST00000484181 SYCP2Q9BX26 1530 aa23.72■■□□□ 1.39
PCCB-217ENST00000484181 SLC4A1APQ9BWU0 796 aaKnown RBP23.71■■□□□ 1.39
PCCB-217ENST00000484181 WDR7Q9Y4E6 1490 aa23.7■■□□□ 1.38
PCCB-217ENST00000484181 KIF15Q9NS87 1388 aa23.69■■□□□ 1.38
PCCB-217ENST00000484181 HNRNPMP52272 730 aaKnown RBP eCLIP23.69■■□□□ 1.381e-7■■■□□ 18.3
PCCB-217ENST00000484181 KDM5DQ9BY66 1539 aa23.67■■□□□ 1.38
PCCB-217ENST00000484181 PZPP20742 1482 aa23.67■■□□□ 1.38
PCCB-217ENST00000484181 KCNH8Q96L42 1107 aa23.67■■□□□ 1.38
PCCB-217ENST00000484181 EFCAB2Q5VUJ9 269 aa23.67■■□□□ 1.38
PCCB-217ENST00000484181 PLXNC1O60486 1568 aa23.66■■□□□ 1.38
PCCB-217ENST00000484181 ANKRD30BQ9BXX2 1392 aa23.65■■□□□ 1.38
PCCB-217ENST00000484181 RPRD2Q5VT52 1461 aaKnown RBP23.64■■□□□ 1.38
PCCB-217ENST00000484181 ABCC1P33527 1531 aa23.62■■□□□ 1.37
PCCB-217ENST00000484181 ABCA9Q8IUA7 1624 aa23.59■■□□□ 1.37
PCCB-217ENST00000484181 NUP155O75694 1391 aa23.57■■□□□ 1.36
PCCB-217ENST00000484181 NPM1P06748 294 aaKnown RBP eCLIP23.57■■□□□ 1.36
PCCB-217ENST00000484181 DUOX2Q9NRD8 1548 aa23.55■■□□□ 1.36
PCCB-217ENST00000484181 ASXL2Q76L83 1435 aa23.54■■□□□ 1.36
PCCB-217ENST00000484181 ERBINQ96RT1 1412 aa23.53■■□□□ 1.36
PCCB-217ENST00000484181 UNC13BO14795 1591 aa23.53■■□□□ 1.36
PCCB-217ENST00000484181 CENPBP07199 599 aaPredicted RBP23.52■■□□□ 1.36
PCCB-217ENST00000484181 FOXD1Q16676 465 aa23.52■■□□□ 1.36
PCCB-217ENST00000484181 MIER1Q8N108 512 aa23.52■■□□□ 1.36
PCCB-217ENST00000484181 TEX14Q8IWB6 1497 aa23.52■■□□□ 1.36
PCCB-217ENST00000484181 PKD2Q13563 968 aa23.51■■□□□ 1.35
PCCB-217ENST00000484181 ARHGEF12Q9NZN5 1544 aa23.51■■□□□ 1.35
PCCB-217ENST00000484181 RTEL1-TNFRSF6BF6WH68 1400 aa23.5■■□□□ 1.35
PCCB-217ENST00000484181 FANCAO15360 1455 aa23.49■■□□□ 1.35
PCCB-217ENST00000484181 FAM135AQ9P2D6 1515 aa23.48■■□□□ 1.35
PCCB-217ENST00000484181 L3MBTL2Q969R5 705 aa23.47■■□□□ 1.35
PCCB-217ENST00000484181 CFAP74Q9C0B2 1584 aa23.45■■□□□ 1.34
PCCB-217ENST00000484181 SPAG9O60271 1321 aaKnown RBP23.43■■□□□ 1.34
PCCB-217ENST00000484181 TRAPPC8Q9Y2L5 1435 aa23.43■■□□□ 1.34
PCCB-217ENST00000484181 ZFYVE16Q7Z3T8 1539 aa23.43■■□□□ 1.34
PCCB-217ENST00000484181 IQGAP3Q86VI3 1631 aa23.42■■□□□ 1.34
PCCB-217ENST00000484181 MAGI2Q86UL8 1455 aa23.42■■□□□ 1.34
PCCB-217ENST00000484181 ADGRL1O94910 1474 aa23.41■■□□□ 1.34
PCCB-217ENST00000484181 EIF4G2P78344 907 aaKnown RBP eCLIP23.38■■□□□ 1.33
PCCB-217ENST00000484181 INO80Q9ULG1 1556 aaPredicted RBP23.37■■□□□ 1.33
PCCB-217ENST00000484181 ATP7AQ04656 1500 aa23.36■■□□□ 1.33
PCCB-217ENST00000484181 SCAPERQ9BY12 1400 aa23.33■■□□□ 1.33
PCCB-217ENST00000484181 CCDC144AA2RUR9 1427 aa23.32■■□□□ 1.32
PCCB-217ENST00000484181 ZNF518AQ6AHZ1 1483 aa23.31■■□□□ 1.32
PCCB-217ENST00000484181 CD109Q6YHK3 1445 aa23.31■■□□□ 1.32
PCCB-217ENST00000484181 DDX10Q13206 875 aaKnown RBP23.3■■□□□ 1.32
PCCB-217ENST00000484181 EIF2AK4Q9P2K8 1649 aaKnown RBP23.3■■□□□ 1.32
PCCB-217ENST00000484181 UHRF1BP1Q6BDS2 1440 aa23.29■■□□□ 1.32
PCCB-217ENST00000484181 HSPA5P11021 654 aaKnown RBP23.28■■□□□ 1.32
PCCB-217ENST00000484181 AFAP1Q8N556 730 aa23.28■■□□□ 1.32
PCCB-217ENST00000484181 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.28■■□□□ 1.32
PCCB-217ENST00000484181 ATP10AO60312 1499 aa23.27■■□□□ 1.32
PCCB-217ENST00000484181 DEPDC5O75140 1603 aa23.27■■□□□ 1.32
PCCB-217ENST00000484181 KANK1Q14678 1352 aa23.26■■□□□ 1.31
PCCB-217ENST00000484181 HIRIP3Q9BW71 556 aaPredicted RBP23.25■■□□□ 1.31
PCCB-217ENST00000484181 NBPF8Q3BBV2 869 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 179.2 ms