RNA–Protein interactions for RNA: ENST00000483871.6

SRSF6-202, Transcript of serine and arginine rich splicing factor 6, humanhuman

TSL 2

Gene SRSF6, Length 1,680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-202ENST00000483871 PREX2Q70Z35 1606 aa21.73■■□□□ 1.07
SRSF6-202ENST00000483871 ARHGAP5Q13017 1502 aa21.73■■□□□ 1.07
SRSF6-202ENST00000483871 EFCAB2Q5VUJ9 269 aa21.72■■□□□ 1.07
SRSF6-202ENST00000483871 PPRC1Q5VV67 1664 aaKnown RBP21.72■■□□□ 1.07
SRSF6-202ENST00000483871 FANCAO15360 1455 aa21.71■■□□□ 1.07
SRSF6-202ENST00000483871 ITSN2Q9NZM3 1697 aa21.7■■□□□ 1.06
SRSF6-202ENST00000483871 FGD6Q6ZV73 1430 aa21.69■■□□□ 1.06
SRSF6-202ENST00000483871 ARAP3Q8WWN8 1544 aa21.68■■□□□ 1.06
SRSF6-202ENST00000483871 MIA2Q96PC5 1412 aa21.67■■□□□ 1.06
SRSF6-202ENST00000483871 AKNAQ7Z591 1439 aa21.65■■□□□ 1.06
SRSF6-202ENST00000483871 FAM50AQ14320 339 aaKnown RBP21.65■■□□□ 1.06
SRSF6-202ENST00000483871 SAMD9LQ8IVG5 1584 aa21.64■■□□□ 1.05
SRSF6-202ENST00000483871 TEX14Q8IWB6 1497 aa21.64■■□□□ 1.05
SRSF6-202ENST00000483871 HNRNPMP52272 730 aaKnown RBP eCLIP21.64■■□□□ 1.05
SRSF6-202ENST00000483871 NEO1Q92859 1461 aa21.62■■□□□ 1.05
SRSF6-202ENST00000483871 PTPN23Q9H3S7 1636 aa21.62■■□□□ 1.05
SRSF6-202ENST00000483871 CAMSAP2Q08AD1 1489 aa21.61■■□□□ 1.05
SRSF6-202ENST00000483871 RRBP1Q9P2E9 1410 aaKnown RBP21.6■■□□□ 1.05
SRSF6-202ENST00000483871 ARHGEF12Q9NZN5 1544 aa21.6■■□□□ 1.05
SRSF6-202ENST00000483871 SCAPERQ9BY12 1400 aa21.6■■□□□ 1.05
SRSF6-202ENST00000483871 ADGRL1O94910 1474 aa21.59■■□□□ 1.05
SRSF6-202ENST00000483871 TCOF1Q13428 1488 aaKnown RBP21.58■■□□□ 1.05
SRSF6-202ENST00000483871 CFAP74Q9C0B2 1584 aa21.57■■□□□ 1.04
SRSF6-202ENST00000483871 RAPGEF3O95398 923 aa21.57■■□□□ 1.04
SRSF6-202ENST00000483871 COL17A1Q9UMD9 1497 aaPredicted RBP21.56■■□□□ 1.04
SRSF6-202ENST00000483871 ABCC1P33527 1531 aa21.56■■□□□ 1.04
SRSF6-202ENST00000483871 SYCP2Q9BX26 1530 aa21.56■■□□□ 1.04
SRSF6-202ENST00000483871 AFAP1Q8N556 730 aa21.56■■□□□ 1.04
SRSF6-202ENST00000483871 KIAA1107Q9UPP5 1409 aa21.55■■□□□ 1.04
SRSF6-202ENST00000483871 TRAPPC8Q9Y2L5 1435 aa21.55■■□□□ 1.04
SRSF6-202ENST00000483871 MBD5Q9P267 1494 aa21.55■■□□□ 1.04
SRSF6-202ENST00000483871 ITGAEP38570 1179 aa21.54■■□□□ 1.04
SRSF6-202ENST00000483871 PLEKHH2Q8IVE3 1493 aa21.54■■□□□ 1.04
SRSF6-202ENST00000483871 DENND4BO75064 1496 aaPredicted RBP21.52■■□□□ 1.03
SRSF6-202ENST00000483871 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.5■■□□□ 1.032e-17■■□□□ 11.8
SRSF6-202ENST00000483871 ABCC5O15440 1437 aa21.48■■□□□ 1.03
SRSF6-202ENST00000483871 RSPH4AQ5TD94 716 aa21.48■■□□□ 1.03
SRSF6-202ENST00000483871 POGZQ7Z3K3 1410 aa21.47■■□□□ 1.03
SRSF6-202ENST00000483871 CHIC2Q9UKJ5 165 aa21.47■■□□□ 1.03
SRSF6-202ENST00000483871 DAPK1P53355 1430 aa21.47■■□□□ 1.03
SRSF6-202ENST00000483871 PTPRKQ15262 1439 aa21.46■■□□□ 1.03
SRSF6-202ENST00000483871 ARHGEF5Q12774 1597 aa21.46■■□□□ 1.03
SRSF6-202ENST00000483871 TSPY4P0CV99 314 aa21.45■■□□□ 1.02
SRSF6-202ENST00000483871 TSPY10P0CW01 314 aa21.45■■□□□ 1.02
SRSF6-202ENST00000483871 TRIM26Q12899 539 aaPredicted RBP21.45■■□□□ 1.02
SRSF6-202ENST00000483871 CCDC141Q6ZP82 1450 aa21.45■■□□□ 1.02
SRSF6-202ENST00000483871 RICTORQ6R327 1708 aa21.45■■□□□ 1.02
SRSF6-202ENST00000483871 KDM6BO15054 1643 aa21.45■■□□□ 1.02
SRSF6-202ENST00000483871 DNMT1P26358 1616 aaKnown RBP21.45■■□□□ 1.02
SRSF6-202ENST00000483871 ZNF518AQ6AHZ1 1483 aa21.44■■□□□ 1.02
SRSF6-202ENST00000483871 FRMPD1Q5SYB0 1578 aa21.44■■□□□ 1.02
SRSF6-202ENST00000483871 MYT1LQ9UL68 1186 aa21.44■■□□□ 1.02
SRSF6-202ENST00000483871 SPAG9O60271 1321 aaKnown RBP21.42■■□□□ 1.02
SRSF6-202ENST00000483871 KDM5CP41229 1560 aa21.39■■□□□ 1.02
SRSF6-202ENST00000483871 C9orf84Q5VXU9 1444 aa21.39■■□□□ 1.01
SRSF6-202ENST00000483871 CROCC2H7BZ55 1655 aa21.36■■□□□ 1.01
SRSF6-202ENST00000483871 RRP7BPQ9NSQ0 103 aa21.35■■□□□ 1.01
SRSF6-202ENST00000483871 MLH3Q9UHC1 1453 aa21.35■■□□□ 1.01
SRSF6-202ENST00000483871 YEATS2Q9ULM3 1422 aa21.34■■□□□ 1.01
SRSF6-202ENST00000483871 KIDINS220Q9ULH0 1771 aa21.34■■□□□ 1.01
SRSF6-202ENST00000483871 SHANK2Q9UPX8 1470 aa21.34■■□□□ 1.01
SRSF6-202ENST00000483871 RTEL1-TNFRSF6BF6WH68 1400 aa21.34■■□□□ 1.01
SRSF6-202ENST00000483871 ZMYM4Q5VZL5 1548 aa21.33■■□□□ 1.01
SRSF6-202ENST00000483871 HECW2Q9P2P5 1572 aa21.33■■□□□ 1
SRSF6-202ENST00000483871 ATP7AQ04656 1500 aa21.33■■□□□ 1
SRSF6-202ENST00000483871 ZFYVE16Q7Z3T8 1539 aa21.33■■□□□ 1
SRSF6-202ENST00000483871 PCGF6Q9BYE7 350 aa21.32■■□□□ 1
SRSF6-202ENST00000483871 MAST1Q9Y2H9 1570 aa21.32■■□□□ 1
SRSF6-202ENST00000483871 INO80Q9ULG1 1556 aaPredicted RBP21.31■■□□□ 1
SRSF6-202ENST00000483871 NCOA1Q15788 1441 aa21.31■■□□□ 1
SRSF6-202ENST00000483871 ANKRD30AQ9BXX3 1397 aa21.3■■□□□ 1
SRSF6-202ENST00000483871 MAGI2Q86UL8 1455 aa21.29■■□□□ 1
SRSF6-202ENST00000483871 ADGRL2O95490 1459 aa21.28■■□□□ 1
SRSF6-202ENST00000483871 ABCA6Q8N139 1617 aa21.27■■□□□ 1
SRSF6-202ENST00000483871 ROCK1Q13464 1354 aa21.27■■□□□ 1
SRSF6-202ENST00000483871 KIF15Q9NS87 1388 aa21.27■■□□□ 1
SRSF6-202ENST00000483871 ADGBQ8N7X0 1667 aa21.25■□□□□ 0.99
SRSF6-202ENST00000483871 DIP2CQ9Y2E4 1556 aa21.25■□□□□ 0.99
SRSF6-202ENST00000483871 PLXNC1O60486 1568 aa21.23■□□□□ 0.99
SRSF6-202ENST00000483871 ATP10AO60312 1499 aa21.23■□□□□ 0.99
SRSF6-202ENST00000483871 NAIPQ13075 1403 aa21.22■□□□□ 0.99
SRSF6-202ENST00000483871 ARHGEF40Q8TER5 1519 aa21.21■□□□□ 0.99
SRSF6-202ENST00000483871 DHX29Q7Z478 1369 aaKnown RBP21.21■□□□□ 0.99
SRSF6-202ENST00000483871 A2MP01023 1474 aa21.21■□□□□ 0.99
SRSF6-202ENST00000483871 HFM1A2PYH4 1435 aa21.19■□□□□ 0.98
SRSF6-202ENST00000483871 ANKRD50Q9ULJ7 1429 aa21.18■□□□□ 0.98
SRSF6-202ENST00000483871 DUOX2Q9NRD8 1548 aa21.18■□□□□ 0.98
SRSF6-202ENST00000483871 SIGLEC1Q9BZZ2 1709 aa21.17■□□□□ 0.98
SRSF6-202ENST00000483871 KIF3BO15066 747 aa21.16■□□□□ 0.98
SRSF6-202ENST00000483871 SETD5Q9C0A6 1442 aa21.15■□□□□ 0.98
SRSF6-202ENST00000483871 ARID4BQ4LE39 1312 aaPredicted RBP21.15■□□□□ 0.98
SRSF6-202ENST00000483871 GCC2Q8IWJ2 1684 aa21.13■□□□□ 0.97
SRSF6-202ENST00000483871 ERBINQ96RT1 1412 aa21.12■□□□□ 0.97
SRSF6-202ENST00000483871 MLECQ14165 292 aa21.12■□□□□ 0.97
SRSF6-202ENST00000483871 GGT6Q6P531 493 aa21.12■□□□□ 0.97
SRSF6-202ENST00000483871 RAB3GAP2Q9H2M9 1393 aa21.11■□□□□ 0.97
SRSF6-202ENST00000483871 REREQ9P2R6 1566 aa21.11■□□□□ 0.97
SRSF6-202ENST00000483871 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.09■□□□□ 0.976e-11■■□□□ 12.6
SRSF6-202ENST00000483871 AGLP35573 1532 aa21.07■□□□□ 0.96
SRSF6-202ENST00000483871 TRIM52Q96A61 297 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms