RNA–Protein interactions for RNA: ENST00000483563.5

ARRDC1-209, Transcript of arrestin domain containing 1, humanhuman

TSL 3

Gene ARRDC1, Length 704 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC1-209ENST00000483563 ATP1B4Q9UN42 357 aaPredicted RBP29.53■■■□□ 2.32
ARRDC1-209ENST00000483563 MYO5CQ9NQX4 1742 aa29.52■■■□□ 2.32
ARRDC1-209ENST00000483563 FER1L4A9Z1Z3 1794 aa29.51■■■□□ 2.31
ARRDC1-209ENST00000483563 PLPPR3Q6T4P5 718 aa29.49■■■□□ 2.31
ARRDC1-209ENST00000483563 KIF14Q15058 1648 aa29.49■■■□□ 2.31
ARRDC1-209ENST00000483563 YEATS2Q9ULM3 1422 aa29.47■■■□□ 2.31
ARRDC1-209ENST00000483563 HSPA2P54652 639 aa29.47■■■□□ 2.31
ARRDC1-209ENST00000483563 CDK11AQ9UQ88 783 aaPredicted RBP29.47■■■□□ 2.31
ARRDC1-209ENST00000483563 SIGLEC1Q9BZZ2 1709 aa29.46■■■□□ 2.31
ARRDC1-209ENST00000483563 CCDC18Q5T9S5 1454 aa29.42■■■□□ 2.3
ARRDC1-209ENST00000483563 CLIP1P30622 1438 aa29.41■■■□□ 2.3
ARRDC1-209ENST00000483563 TROQ12816 1431 aaPredicted RBP29.41■■■□□ 2.3
ARRDC1-209ENST00000483563 CASKIN1Q8WXD9 1431 aa29.41■■■□□ 2.3
ARRDC1-209ENST00000483563 PLCH2O75038 1416 aa29.4■■■□□ 2.3
ARRDC1-209ENST00000483563 SCAPERQ9BY12 1400 aa29.4■■■□□ 2.3
ARRDC1-209ENST00000483563 MLECQ14165 292 aa29.4■■■□□ 2.3
ARRDC1-209ENST00000483563 CERKQ8TCT0 537 aa29.37■■■□□ 2.29
ARRDC1-209ENST00000483563 PREX1Q8TCU6 1659 aa29.37■■■□□ 2.29
ARRDC1-209ENST00000483563 FYCO1Q9BQS8 1478 aa29.36■■■□□ 2.29
ARRDC1-209ENST00000483563 C9orf84Q5VXU9 1444 aa29.36■■■□□ 2.29
ARRDC1-209ENST00000483563 ATP10AO60312 1499 aa29.36■■■□□ 2.29
ARRDC1-209ENST00000483563 ARHGEF12Q9NZN5 1544 aa29.35■■■□□ 2.29
ARRDC1-209ENST00000483563 EFCAB2Q5VUJ9 269 aa29.3■■■□□ 2.28
ARRDC1-209ENST00000483563 CDC42BPBQ9Y5S2 1711 aa29.29■■■□□ 2.28
ARRDC1-209ENST00000483563 ARHGAP5Q13017 1502 aa29.29■■■□□ 2.28
ARRDC1-209ENST00000483563 PREX2Q70Z35 1606 aa29.27■■■□□ 2.28
ARRDC1-209ENST00000483563 ZNF518AQ6AHZ1 1483 aa29.26■■■□□ 2.27
ARRDC1-209ENST00000483563 DMRT2Q9Y5R5 561 aa29.22■■■□□ 2.27
ARRDC1-209ENST00000483563 CDC42BPAQ5VT25 1732 aa29.22■■■□□ 2.27
ARRDC1-209ENST00000483563 KDM5CP41229 1560 aa29.19■■■□□ 2.26
ARRDC1-209ENST00000483563 UHRF1BP1Q6BDS2 1440 aa29.19■■■□□ 2.26
ARRDC1-209ENST00000483563 SETD1BQ9UPS6 1966 aaKnown RBP29.19■■■□□ 2.26
ARRDC1-209ENST00000483563 MYT1LQ9UL68 1186 aa29.16■■■□□ 2.26
ARRDC1-209ENST00000483563 CEBPAP49715 358 aaPredicted RBP29.15■■■□□ 2.26
ARRDC1-209ENST00000483563 STRCQ7RTU9 1775 aa29.15■■■□□ 2.26
ARRDC1-209ENST00000483563 ITSN2Q9NZM3 1697 aa29.15■■■□□ 2.26
ARRDC1-209ENST00000483563 REREQ9P2R6 1566 aa29.14■■■□□ 2.26
ARRDC1-209ENST00000483563 ABCC1P33527 1531 aa29.13■■■□□ 2.25
ARRDC1-209ENST00000483563 DIP2CQ9Y2E4 1556 aa29.13■■■□□ 2.25
ARRDC1-209ENST00000483563 CEP162Q5TB80 1403 aa29.11■■■□□ 2.25
ARRDC1-209ENST00000483563 AFAP1Q8N556 730 aa29.09■■■□□ 2.25
ARRDC1-209ENST00000483563 C3P01024 1663 aa29.07■■■□□ 2.24
ARRDC1-209ENST00000483563 ABCA6Q8N139 1617 aa29.06■■■□□ 2.24
ARRDC1-209ENST00000483563 ESF1Q9H501 851 aaKnown RBP29.06■■■□□ 2.24
ARRDC1-209ENST00000483563 MLH3Q9UHC1 1453 aa29.05■■■□□ 2.24
ARRDC1-209ENST00000483563 DISP3Q9P2K9 1392 aa29.04■■■□□ 2.24
ARRDC1-209ENST00000483563 AGLP35573 1532 aa29.03■■■□□ 2.24
ARRDC1-209ENST00000483563 PTPRTO14522 1441 aa29.03■■■□□ 2.24
ARRDC1-209ENST00000483563 SAMD9LQ8IVG5 1584 aa29.01■■■□□ 2.23
ARRDC1-209ENST00000483563 MTUS2Q5JR59 1369 aa29■■■□□ 2.23
ARRDC1-209ENST00000483563 EHBP1L1Q8N3D4 1523 aa28.99■■■□□ 2.23
ARRDC1-209ENST00000483563 GPATCH8Q9UKJ3 1502 aaKnown RBP28.99■■■□□ 2.23
ARRDC1-209ENST00000483563 TRAPPC8Q9Y2L5 1435 aa28.97■■■□□ 2.23
ARRDC1-209ENST00000483563 CNTLNQ9NXG0 1405 aa28.96■■■□□ 2.23
ARRDC1-209ENST00000483563 KIDINS220Q9ULH0 1771 aa28.96■■■□□ 2.23
ARRDC1-209ENST00000483563 SYCP2Q9BX26 1530 aa28.94■■■□□ 2.22
ARRDC1-209ENST00000483563 CCNB3Q8WWL7 1395 aa28.92■■■□□ 2.22
ARRDC1-209ENST00000483563 IQSEC2Q5JU85 1478 aa28.91■■■□□ 2.22
ARRDC1-209ENST00000483563 TIAM1Q13009 1591 aa28.91■■■□□ 2.22
ARRDC1-209ENST00000483563 SPATA31D1Q6ZQQ2 1576 aa28.91■■■□□ 2.22
ARRDC1-209ENST00000483563 PLEKHH2Q8IVE3 1493 aa28.91■■■□□ 2.22
ARRDC1-209ENST00000483563 SOCS7O14512 581 aa28.89■■■□□ 2.22
ARRDC1-209ENST00000483563 ZNF777Q9ULD5 760 aaPredicted RBP28.89■■■□□ 2.22
ARRDC1-209ENST00000483563 MROH2AA6NES4 1674 aa28.88■■■□□ 2.21
ARRDC1-209ENST00000483563 NCOA1Q15788 1441 aa28.87■■■□□ 2.21
ARRDC1-209ENST00000483563 SUPT6HQ7KZ85 1726 aaKnown RBP28.87■■■□□ 2.21
ARRDC1-209ENST00000483563 ILDR2Q71H61 639 aa28.86■■■□□ 2.21
ARRDC1-209ENST00000483563 CFDP1Q9UEE9 299 aaPredicted RBP28.86■■■□□ 2.21
ARRDC1-209ENST00000483563 LTBP4Q8N2S1 1624 aa28.86■■■□□ 2.21
ARRDC1-209ENST00000483563 KIAA1107Q9UPP5 1409 aa28.85■■■□□ 2.21
ARRDC1-209ENST00000483563 NPATQ14207 1427 aa28.84■■■□□ 2.21
ARRDC1-209ENST00000483563 INO80Q9ULG1 1556 aaPredicted RBP28.83■■■□□ 2.21
ARRDC1-209ENST00000483563 ATP7AQ04656 1500 aa28.81■■■□□ 2.2
ARRDC1-209ENST00000483563 CAMSAP1Q5T5Y3 1602 aa28.8■■■□□ 2.2
ARRDC1-209ENST00000483563 VPS8Q8N3P4 1428 aa28.8■■■□□ 2.2
ARRDC1-209ENST00000483563 LOC105371045A0A1W2PR82 267 aa28.79■■■□□ 2.2
ARRDC1-209ENST00000483563 SPAG9O60271 1321 aaKnown RBP28.77■■■□□ 2.2
ARRDC1-209ENST00000483563 HNRNPMP52272 730 aaKnown RBP eCLIP28.77■■■□□ 2.2
ARRDC1-209ENST00000483563 ADGBQ8N7X0 1667 aa28.74■■■□□ 2.19
ARRDC1-209ENST00000483563 NCOA2Q15596 1464 aa28.74■■■□□ 2.19
ARRDC1-209ENST00000483563 ZMYM3Q14202 1370 aa28.74■■■□□ 2.19
ARRDC1-209ENST00000483563 ZNF142P52746 1687 aaPredicted RBP28.72■■■□□ 2.19
ARRDC1-209ENST00000483563 CLTCQ00610 1675 aaKnown RBP28.71■■■□□ 2.19
ARRDC1-209ENST00000483563 PLXNC1O60486 1568 aa28.71■■■□□ 2.19
ARRDC1-209ENST00000483563 MYO3AQ8NEV4 1616 aa28.7■■■□□ 2.19
ARRDC1-209ENST00000483563 PLA2R1Q13018 1463 aa28.68■■■□□ 2.18
ARRDC1-209ENST00000483563 LRRC9Q6ZRR7 1453 aa28.66■■■□□ 2.18
ARRDC1-209ENST00000483563 MBD5Q9P267 1494 aa28.66■■■□□ 2.18
ARRDC1-209ENST00000483563 A2MP01023 1474 aa28.66■■■□□ 2.18
ARRDC1-209ENST00000483563 MAP3K1Q13233 1512 aa28.65■■■□□ 2.18
ARRDC1-209ENST00000483563 PKD2Q13563 968 aa28.65■■■□□ 2.18
ARRDC1-209ENST00000483563 ZNF644Q9H582 1327 aaPredicted RBP28.65■■■□□ 2.18
ARRDC1-209ENST00000483563 CAMSAP2Q08AD1 1489 aa28.65■■■□□ 2.18
ARRDC1-209ENST00000483563 CEP170BQ9Y4F5 1589 aaPredicted RBP28.64■■■□□ 2.18
ARRDC1-209ENST00000483563 NCKAP5LQ9HCH0 1330 aa28.64■■■□□ 2.17
ARRDC1-209ENST00000483563 CCDC141Q6ZP82 1450 aa28.61■■■□□ 2.17
ARRDC1-209ENST00000483563 ZNF335Q9H4Z2 1342 aaPredicted RBP28.61■■■□□ 2.17
ARRDC1-209ENST00000483563 UBAP1LF5GYI3 381 aa28.6■■■□□ 2.17
ARRDC1-209ENST00000483563 RTEL1-TNFRSF6BF6WH68 1400 aa28.6■■■□□ 2.17
ARRDC1-209ENST00000483563 PTPRKQ15262 1439 aa28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms