RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 ABCC5O15440 1437 aa17.3■□□□□ 0.36
SND1-210ENST00000483503 ABCC2Q92887 1545 aa17.29■□□□□ 0.36
SND1-210ENST00000483503 ABCC10Q5T3U5 1492 aa17.29■□□□□ 0.36
SND1-210ENST00000483503 CHIC2Q9UKJ5 165 aa17.28■□□□□ 0.36
SND1-210ENST00000483503 RRP7BPQ9NSQ0 103 aa17.27■□□□□ 0.36
SND1-210ENST00000483503 UHRF1BP1LA0JNW5 1464 aa17.26■□□□□ 0.35
SND1-210ENST00000483503 CDC42BPAQ5VT25 1732 aa17.24■□□□□ 0.35
SND1-210ENST00000483503 ADGBQ8N7X0 1667 aa17.23■□□□□ 0.35
SND1-210ENST00000483503 ADGRL2O95490 1459 aa17.23■□□□□ 0.35
SND1-210ENST00000483503 ZNF644Q9H582 1327 aaPredicted RBP17.22■□□□□ 0.35
SND1-210ENST00000483503 ERCC6L2Q5T890 1561 aa17.22■□□□□ 0.35
SND1-210ENST00000483503 CROCC2H7BZ55 1655 aa17.21■□□□□ 0.35
SND1-210ENST00000483503 SHANK2Q9UPX8 1470 aa17.21■□□□□ 0.35
SND1-210ENST00000483503 NEUROD1Q13562 356 aa17.2■□□□□ 0.34
SND1-210ENST00000483503 TRIM52Q96A61 297 aa17.2■□□□□ 0.34
SND1-210ENST00000483503 ZNF777Q9ULD5 760 aaPredicted RBP17.2■□□□□ 0.34
SND1-210ENST00000483503 ANKRD30AQ9BXX3 1397 aa17.19■□□□□ 0.34
SND1-210ENST00000483503 RSPH4AQ5TD94 716 aa17.19■□□□□ 0.34
SND1-210ENST00000483503 SIN3AQ96ST3 1273 aa17.19■□□□□ 0.34
SND1-210ENST00000483503 ARHGEF5Q12774 1597 aa17.18■□□□□ 0.34
SND1-210ENST00000483503 PREX2Q70Z35 1606 aa17.18■□□□□ 0.34
SND1-210ENST00000483503 TONSLQ96HA7 1378 aa17.17■□□□□ 0.34
SND1-210ENST00000483503 NCOA1Q15788 1441 aa17.17■□□□□ 0.34
SND1-210ENST00000483503 KDM5BQ9UGL1 1544 aa17.16■□□□□ 0.34
SND1-210ENST00000483503 TSPY4P0CV99 314 aa17.15■□□□□ 0.34
SND1-210ENST00000483503 TSPY10P0CW01 314 aa17.15■□□□□ 0.34
SND1-210ENST00000483503 KDM6BO15054 1643 aa17.14■□□□□ 0.33
SND1-210ENST00000483503 PLEKHH2Q8IVE3 1493 aa17.14■□□□□ 0.33
SND1-210ENST00000483503 MPHOSPH9Q99550 1183 aa17.14■□□□□ 0.33
SND1-210ENST00000483503 PPP1R15AO75807 674 aaPredicted RBP17.13■□□□□ 0.33
SND1-210ENST00000483503 ZCCHC11Q5TAX3 1644 aaKnown RBP17.13■□□□□ 0.33
SND1-210ENST00000483503 C9orf84Q5VXU9 1444 aa17.13■□□□□ 0.33
SND1-210ENST00000483503 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.11■□□□□ 0.33
SND1-210ENST00000483503 CDC42BPBQ9Y5S2 1711 aa17.11■□□□□ 0.33
SND1-210ENST00000483503 MYO5CQ9NQX4 1742 aa17.1■□□□□ 0.33
SND1-210ENST00000483503 CCDC141Q6ZP82 1450 aa17.1■□□□□ 0.33
SND1-210ENST00000483503 OSCARQ8IYS5 282 aa17.09■□□□□ 0.33
SND1-210ENST00000483503 ARHGAP5Q13017 1502 aa17.09■□□□□ 0.33
SND1-210ENST00000483503 TTC37Q6PGP7 1564 aa17.08■□□□□ 0.32
SND1-210ENST00000483503 SAMD9LQ8IVG5 1584 aa17.08■□□□□ 0.32
SND1-210ENST00000483503 MBD5Q9P267 1494 aa17.08■□□□□ 0.32
SND1-210ENST00000483503 KIAA1107Q9UPP5 1409 aa17.08■□□□□ 0.32
SND1-210ENST00000483503 ANKRD50Q9ULJ7 1429 aa17.07■□□□□ 0.32
SND1-210ENST00000483503 DENND4BO75064 1496 aaPredicted RBP17.05■□□□□ 0.32
SND1-210ENST00000483503 SLC4A1APQ9BWU0 796 aaKnown RBP17.05■□□□□ 0.32
SND1-210ENST00000483503 MAST1Q9Y2H9 1570 aa17.05■□□□□ 0.32
SND1-210ENST00000483503 PLCH2O75038 1416 aa17.04■□□□□ 0.32
SND1-210ENST00000483503 HNRNPMP52272 730 aaKnown RBP eCLIP17.04■□□□□ 0.321e-7■□□□□ 10.5
SND1-210ENST00000483503 ILDR1Q86SU0 546 aaPredicted RBP17.04■□□□□ 0.32
SND1-210ENST00000483503 ARAP3Q8WWN8 1544 aa17.04■□□□□ 0.32
SND1-210ENST00000483503 ANKRD30BQ9BXX2 1392 aa17.03■□□□□ 0.32
SND1-210ENST00000483503 EFCAB2Q5VUJ9 269 aa17.03■□□□□ 0.32
SND1-210ENST00000483503 KCNH8Q96L42 1107 aa17.02■□□□□ 0.32
SND1-210ENST00000483503 KIF15Q9NS87 1388 aa17.02■□□□□ 0.31
SND1-210ENST00000483503 PZPP20742 1482 aa17.01■□□□□ 0.31
SND1-210ENST00000483503 SYCP2Q9BX26 1530 aa17.01■□□□□ 0.31
SND1-210ENST00000483503 WDR7Q9Y4E6 1490 aa17■□□□□ 0.31
SND1-210ENST00000483503 KDM5DQ9BY66 1539 aa17■□□□□ 0.31
SND1-210ENST00000483503 RPRD2Q5VT52 1461 aaKnown RBP16.99■□□□□ 0.31
SND1-210ENST00000483503 PLXNC1O60486 1568 aa16.97■□□□□ 0.31
SND1-210ENST00000483503 NUP155O75694 1391 aa16.95■□□□□ 0.3
SND1-210ENST00000483503 NPM1P06748 294 aaKnown RBP eCLIP16.95■□□□□ 0.3
SND1-210ENST00000483503 CENPBP07199 599 aaPredicted RBP16.95■□□□□ 0.3
SND1-210ENST00000483503 MIER1Q8N108 512 aa16.95■□□□□ 0.3
SND1-210ENST00000483503 ABCC1P33527 1531 aa16.94■□□□□ 0.3
SND1-210ENST00000483503 ABCA9Q8IUA7 1624 aa16.92■□□□□ 0.3
SND1-210ENST00000483503 PKD2Q13563 968 aa16.92■□□□□ 0.3
SND1-210ENST00000483503 DUOX2Q9NRD8 1548 aa16.91■□□□□ 0.3
SND1-210ENST00000483503 FOXD1Q16676 465 aa16.91■□□□□ 0.3
SND1-210ENST00000483503 RTEL1-TNFRSF6BF6WH68 1400 aa16.9■□□□□ 0.3
SND1-210ENST00000483503 ASXL2Q76L83 1435 aa16.9■□□□□ 0.3
SND1-210ENST00000483503 L3MBTL2Q969R5 705 aa16.9■□□□□ 0.3
SND1-210ENST00000483503 ERBINQ96RT1 1412 aa16.89■□□□□ 0.29
SND1-210ENST00000483503 ARHGEF12Q9NZN5 1544 aa16.88■□□□□ 0.29
SND1-210ENST00000483503 UNC13BO14795 1591 aa16.88■□□□□ 0.29
SND1-210ENST00000483503 TEX14Q8IWB6 1497 aa16.87■□□□□ 0.29
SND1-210ENST00000483503 FANCAO15360 1455 aa16.85■□□□□ 0.29
SND1-210ENST00000483503 FAM135AQ9P2D6 1515 aa16.85■□□□□ 0.29
SND1-210ENST00000483503 SPAG9O60271 1321 aaKnown RBP16.84■□□□□ 0.29
SND1-210ENST00000483503 TRHP20396 242 aaPredicted RBP16.83■□□□□ 0.28
SND1-210ENST00000483503 EIF4G2P78344 907 aaKnown RBP eCLIP16.83■□□□□ 0.28
SND1-210ENST00000483503 TRAPPC8Q9Y2L5 1435 aa16.83■□□□□ 0.28
SND1-210ENST00000483503 IQGAP3Q86VI3 1631 aa16.81■□□□□ 0.28
SND1-210ENST00000483503 CFAP74Q9C0B2 1584 aa16.81■□□□□ 0.28
SND1-210ENST00000483503 MAGI2Q86UL8 1455 aa16.8■□□□□ 0.28
SND1-210ENST00000483503 ADGRL1O94910 1474 aa16.79■□□□□ 0.28
SND1-210ENST00000483503 DDX10Q13206 875 aaKnown RBP16.78■□□□□ 0.28
SND1-210ENST00000483503 ZFYVE16Q7Z3T8 1539 aa16.78■□□□□ 0.28
SND1-210ENST00000483503 HSPA5P11021 654 aaKnown RBP16.77■□□□□ 0.28
SND1-210ENST00000483503 SCAPERQ9BY12 1400 aa16.77■□□□□ 0.27
SND1-210ENST00000483503 INO80Q9ULG1 1556 aaPredicted RBP16.76■□□□□ 0.27
SND1-210ENST00000483503 ATP7AQ04656 1500 aa16.75■□□□□ 0.27
SND1-210ENST00000483503 UHRF1BP1Q6BDS2 1440 aa16.75■□□□□ 0.27
SND1-210ENST00000483503 CD109Q6YHK3 1445 aa16.74■□□□□ 0.27
SND1-210ENST00000483503 NBPF8Q3BBV2 869 aa16.74■□□□□ 0.27
SND1-210ENST00000483503 AFAP1Q8N556 730 aa16.74■□□□□ 0.27
SND1-210ENST00000483503 CCDC144AA2RUR9 1427 aa16.73■□□□□ 0.27
SND1-210ENST00000483503 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.73■□□□□ 0.275e-8■□□□□ 8.5
SND1-210ENST00000483503 ATP10AO60312 1499 aa16.73■□□□□ 0.27
SND1-210ENST00000483503 HIRIP3Q9BW71 556 aaPredicted RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms