RNA–Protein interactions for RNA: ENST00000482979.5

ZKSCAN1-204, Transcript of zinc finger with KRAB and SCAN domains 1, humanhuman

TSL 1 (best)

Gene ZKSCAN1, Length 1,449 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1-204ENST00000482979 ZFYVE16Q7Z3T8 1539 aa21.21■□□□□ 0.99
ZKSCAN1-204ENST00000482979 SCAPERQ9BY12 1400 aa21.21■□□□□ 0.99
ZKSCAN1-204ENST00000482979 MYO5CQ9NQX4 1742 aa21.21■□□□□ 0.99
ZKSCAN1-204ENST00000482979 POGZQ7Z3K3 1410 aa21.21■□□□□ 0.99
ZKSCAN1-204ENST00000482979 TROQ12816 1431 aaPredicted RBP21.2■□□□□ 0.98
ZKSCAN1-204ENST00000482979 ILDR1Q86SU0 546 aaPredicted RBP21.2■□□□□ 0.98
ZKSCAN1-204ENST00000482979 RIMS1Q86UR5 1692 aaKnown RBP21.18■□□□□ 0.98
ZKSCAN1-204ENST00000482979 CDK11AQ9UQ88 783 aaPredicted RBP21.18■□□□□ 0.98
ZKSCAN1-204ENST00000482979 MAGI2Q86UL8 1455 aa21.18■□□□□ 0.98
ZKSCAN1-204ENST00000482979 PCF11O94913 1555 aaKnown RBP21.16■□□□□ 0.98
ZKSCAN1-204ENST00000482979 EFCAB2Q5VUJ9 269 aa21.14■□□□□ 0.98
ZKSCAN1-204ENST00000482979 VPS8Q8N3P4 1428 aa21.13■□□□□ 0.97
ZKSCAN1-204ENST00000482979 CASKIN1Q8WXD9 1431 aa21.13■□□□□ 0.97
ZKSCAN1-204ENST00000482979 ARHGAP5Q13017 1502 aa21.12■□□□□ 0.97
ZKSCAN1-204ENST00000482979 LMTK3Q96Q04 1460 aa21.1■□□□□ 0.97
ZKSCAN1-204ENST00000482979 CDC42BPBQ9Y5S2 1711 aa21.1■□□□□ 0.97
ZKSCAN1-204ENST00000482979 CCDC18Q5T9S5 1454 aa21.08■□□□□ 0.97
ZKSCAN1-204ENST00000482979 ATP10AO60312 1499 aa21.08■□□□□ 0.96
ZKSCAN1-204ENST00000482979 MLECQ14165 292 aa21.07■□□□□ 0.96
ZKSCAN1-204ENST00000482979 KDM5CP41229 1560 aa21.07■□□□□ 0.96
ZKSCAN1-204ENST00000482979 C9orf84Q5VXU9 1444 aa21.06■□□□□ 0.96
ZKSCAN1-204ENST00000482979 ZNF518AQ6AHZ1 1483 aa21.06■□□□□ 0.96
ZKSCAN1-204ENST00000482979 PREX2Q70Z35 1606 aa21.05■□□□□ 0.96
ZKSCAN1-204ENST00000482979 AFAP1Q8N556 730 aa21.05■□□□□ 0.96
ZKSCAN1-204ENST00000482979 FER1L4A9Z1Z3 1794 aa21.05■□□□□ 0.96
ZKSCAN1-204ENST00000482979 PLPPR3Q6T4P5 718 aa21.04■□□□□ 0.96
ZKSCAN1-204ENST00000482979 FYCO1Q9BQS8 1478 aa21.04■□□□□ 0.96
ZKSCAN1-204ENST00000482979 ARHGEF12Q9NZN5 1544 aa21.03■□□□□ 0.96
ZKSCAN1-204ENST00000482979 ABCC1P33527 1531 aa21.01■□□□□ 0.95
ZKSCAN1-204ENST00000482979 DIP2CQ9Y2E4 1556 aa21.01■□□□□ 0.95
ZKSCAN1-204ENST00000482979 TRAPPC8Q9Y2L5 1435 aa21■□□□□ 0.95
ZKSCAN1-204ENST00000482979 CDC42BPAQ5VT25 1732 aa21■□□□□ 0.95
ZKSCAN1-204ENST00000482979 ITSN2Q9NZM3 1697 aa20.98■□□□□ 0.95
ZKSCAN1-204ENST00000482979 ABCA6Q8N139 1617 aa20.98■□□□□ 0.95
ZKSCAN1-204ENST00000482979 HSPA2P54652 639 aa20.97■□□□□ 0.95
ZKSCAN1-204ENST00000482979 MLH3Q9UHC1 1453 aa20.97■□□□□ 0.95
ZKSCAN1-204ENST00000482979 REREQ9P2R6 1566 aa20.95■□□□□ 0.94
ZKSCAN1-204ENST00000482979 MYT1LQ9UL68 1186 aa20.94■□□□□ 0.94
ZKSCAN1-204ENST00000482979 CEBPAP49715 358 aaPredicted RBP20.92■□□□□ 0.94
ZKSCAN1-204ENST00000482979 SAMD9LQ8IVG5 1584 aa20.92■□□□□ 0.94
ZKSCAN1-204ENST00000482979 GPATCH8Q9UKJ3 1502 aaKnown RBP20.92■□□□□ 0.94
ZKSCAN1-204ENST00000482979 KIDINS220Q9ULH0 1771 aa20.91■□□□□ 0.94
ZKSCAN1-204ENST00000482979 TIAM1Q13009 1591 aa20.9■□□□□ 0.94
ZKSCAN1-204ENST00000482979 APLP2Q06481 763 aa20.89■□□□□ 0.94
ZKSCAN1-204ENST00000482979 AGLP35573 1532 aa20.88■□□□□ 0.93
ZKSCAN1-204ENST00000482979 SYCP2Q9BX26 1530 aa20.88■□□□□ 0.93
ZKSCAN1-204ENST00000482979 ZNF777Q9ULD5 760 aaPredicted RBP20.87■□□□□ 0.93
ZKSCAN1-204ENST00000482979 PREX1Q8TCU6 1659 aa20.87■□□□□ 0.93
ZKSCAN1-204ENST00000482979 FBXO41Q8TF61 875 aa20.86■□□□□ 0.93
ZKSCAN1-204ENST00000482979 HNRNPMP52272 730 aaKnown RBP eCLIP20.83■□□□□ 0.93
ZKSCAN1-204ENST00000482979 MAP3K1Q13233 1512 aa20.83■□□□□ 0.92
ZKSCAN1-204ENST00000482979 C3P01024 1663 aa20.82■□□□□ 0.92
ZKSCAN1-204ENST00000482979 MTUS2Q5JR59 1369 aa20.82■□□□□ 0.92
ZKSCAN1-204ENST00000482979 CCNB3Q8WWL7 1395 aa20.81■□□□□ 0.92
ZKSCAN1-204ENST00000482979 KIAA1107Q9UPP5 1409 aa20.8■□□□□ 0.92
ZKSCAN1-204ENST00000482979 CFDP1Q9UEE9 299 aaPredicted RBP20.79■□□□□ 0.92
ZKSCAN1-204ENST00000482979 PPARGC1BQ86YN6 1023 aaKnown RBP20.78■□□□□ 0.92
ZKSCAN1-204ENST00000482979 SPAG9O60271 1321 aaKnown RBP20.78■□□□□ 0.92
ZKSCAN1-204ENST00000482979 ATP7AQ04656 1500 aa20.77■□□□□ 0.92
ZKSCAN1-204ENST00000482979 EHBP1L1Q8N3D4 1523 aa20.77■□□□□ 0.92
ZKSCAN1-204ENST00000482979 INO80Q9ULG1 1556 aaPredicted RBP20.77■□□□□ 0.92
ZKSCAN1-204ENST00000482979 LRRC9Q6ZRR7 1453 aa20.77■□□□□ 0.91
ZKSCAN1-204ENST00000482979 PLEKHH2Q8IVE3 1493 aa20.77■□□□□ 0.91
ZKSCAN1-204ENST00000482979 UHRF1BP1Q6BDS2 1440 aa20.76■□□□□ 0.91
ZKSCAN1-204ENST00000482979 SETD1BQ9UPS6 1966 aaKnown RBP20.75■□□□□ 0.91
ZKSCAN1-204ENST00000482979 STRCQ7RTU9 1775 aa20.75■□□□□ 0.91
ZKSCAN1-204ENST00000482979 SUPT6HQ7KZ85 1726 aaKnown RBP20.75■□□□□ 0.91
ZKSCAN1-204ENST00000482979 ZNF644Q9H582 1327 aaPredicted RBP20.74■□□□□ 0.91
ZKSCAN1-204ENST00000482979 KANK4Q5T7N3 995 aaPredicted RBP20.74■□□□□ 0.91
ZKSCAN1-204ENST00000482979 PLXNC1O60486 1568 aa20.74■□□□□ 0.91
ZKSCAN1-204ENST00000482979 ESF1Q9H501 851 aaKnown RBP20.72■□□□□ 0.91
ZKSCAN1-204ENST00000482979 CNTLNQ9NXG0 1405 aa20.72■□□□□ 0.91
ZKSCAN1-204ENST00000482979 MBD5Q9P267 1494 aa20.71■□□□□ 0.91
ZKSCAN1-204ENST00000482979 A2MP01023 1474 aa20.7■□□□□ 0.9
ZKSCAN1-204ENST00000482979 MROH2AA6NES4 1674 aa20.69■□□□□ 0.9
ZKSCAN1-204ENST00000482979 CERKQ8TCT0 537 aa20.68■□□□□ 0.9
ZKSCAN1-204ENST00000482979 CLTCQ00610 1675 aaKnown RBP20.66■□□□□ 0.9
ZKSCAN1-204ENST00000482979 ZMYM3Q14202 1370 aa20.66■□□□□ 0.9
ZKSCAN1-204ENST00000482979 NCOA2Q15596 1464 aa20.66■□□□□ 0.9
ZKSCAN1-204ENST00000482979 ADGBQ8N7X0 1667 aa20.65■□□□□ 0.9
ZKSCAN1-204ENST00000482979 NPATQ14207 1427 aa20.63■□□□□ 0.89
ZKSCAN1-204ENST00000482979 DMRT2Q9Y5R5 561 aa20.61■□□□□ 0.89
ZKSCAN1-204ENST00000482979 RTEL1-TNFRSF6BF6WH68 1400 aa20.61■□□□□ 0.89
ZKSCAN1-204ENST00000482979 CAMSAP2Q08AD1 1489 aa20.61■□□□□ 0.89
ZKSCAN1-204ENST00000482979 GGT6Q6P531 493 aa20.61■□□□□ 0.89
ZKSCAN1-204ENST00000482979 PTPRTO14522 1441 aa20.6■□□□□ 0.89
ZKSCAN1-204ENST00000482979 NCOA1Q15788 1441 aa20.6■□□□□ 0.89
ZKSCAN1-204ENST00000482979 PTPRKQ15262 1439 aa20.58■□□□□ 0.89
ZKSCAN1-204ENST00000482979 CCDC141Q6ZP82 1450 aa20.58■□□□□ 0.89
ZKSCAN1-204ENST00000482979 CAMSAP1Q5T5Y3 1602 aa20.56■□□□□ 0.88
ZKSCAN1-204ENST00000482979 MYO3AQ8NEV4 1616 aa20.56■□□□□ 0.88
ZKSCAN1-204ENST00000482979 DHX29Q7Z478 1369 aaKnown RBP20.56■□□□□ 0.88
ZKSCAN1-204ENST00000482979 ZNF142P52746 1687 aaPredicted RBP20.54■□□□□ 0.88
ZKSCAN1-204ENST00000482979 PPP6R1Q9UPN7 881 aa20.53■□□□□ 0.88
ZKSCAN1-204ENST00000482979 LTBP4Q8N2S1 1624 aa20.52■□□□□ 0.88
ZKSCAN1-204ENST00000482979 ARHGEF5Q12774 1597 aa20.52■□□□□ 0.88
ZKSCAN1-204ENST00000482979 CEP170BQ9Y4F5 1589 aaPredicted RBP20.51■□□□□ 0.87
ZKSCAN1-204ENST00000482979 MYOM3Q5VTT5 1437 aa20.49■□□□□ 0.87
ZKSCAN1-204ENST00000482979 NCKAP5LQ9HCH0 1330 aa20.49■□□□□ 0.87
ZKSCAN1-204ENST00000482979 KIF3BO15066 747 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms