RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-208ENST00000482855 ZBED9Q6R2W3 1325 aa15.06■□□□□ 0
RPGR-208ENST00000482855 PCF11O94913 1555 aaKnown RBP15.06■□□□□ 0
RPGR-208ENST00000482855 DISP1Q96F81 1524 aa15.06■□□□□ 0
RPGR-208ENST00000482855 UACAQ9BZF9 1416 aa15.05■□□□□ 0
RPGR-208ENST00000482855 IPO9Q96P70 1041 aaKnown RBP15.05■□□□□ -0
RPGR-208ENST00000482855 FAM9BQ8IZU0 186 aa15.04■□□□□ -0
RPGR-208ENST00000482855 CNTLNQ9NXG0 1405 aa15.04■□□□□ -0
RPGR-208ENST00000482855 ADCY10Q96PN6 1610 aa15.04■□□□□ -0
RPGR-208ENST00000482855 CCDC184Q52MB2 194 aa15.03■□□□□ -0
RPGR-208ENST00000482855 NCOA2Q15596 1464 aa15.03■□□□□ -0
RPGR-208ENST00000482855 JPH4Q96JJ6 628 aa15.03■□□□□ -0
RPGR-208ENST00000482855 HSPA5P11021 654 aaKnown RBP15.02■□□□□ -0
RPGR-208ENST00000482855 ZBTB47Q9UFB7 747 aaPredicted RBP15.02■□□□□ -0
RPGR-208ENST00000482855 ATP1B4Q9UN42 357 aaPredicted RBP15.02■□□□□ -0
RPGR-208ENST00000482855 KDM5BQ9UGL1 1544 aa15.02□□□□□ -0.01
RPGR-208ENST00000482855 EFCAB5A4FU69 1503 aa15.01□□□□□ -0.01
RPGR-208ENST00000482855 SALL2Q9Y467 1007 aaPredicted RBP15.01□□□□□ -0.01
RPGR-208ENST00000482855 MRS2Q9HD23 443 aa15.01□□□□□ -0.01
RPGR-208ENST00000482855 HFM1A2PYH4 1435 aa15□□□□□ -0.01
RPGR-208ENST00000482855 PTPN23Q9H3S7 1636 aa15□□□□□ -0.01
RPGR-208ENST00000482855 GLI2P10070 1586 aa14.99□□□□□ -0.01
RPGR-208ENST00000482855 PRKRIP1Q9H875 184 aaPredicted RBP14.99□□□□□ -0.01
RPGR-208ENST00000482855 ABCC2Q92887 1545 aa14.98□□□□□ -0.01
RPGR-208ENST00000482855 KIF13AQ9H1H9 1805 aa14.98□□□□□ -0.01
RPGR-208ENST00000482855 EIF4G2P78344 907 aaKnown RBP eCLIP14.98□□□□□ -0.01
RPGR-208ENST00000482855 FGD6Q6ZV73 1430 aa14.98□□□□□ -0.01
RPGR-208ENST00000482855 ABCA8O94911 1581 aa14.97□□□□□ -0.01
RPGR-208ENST00000482855 FYCO1Q9BQS8 1478 aa14.97□□□□□ -0.01
RPGR-208ENST00000482855 CCDC136Q96JN2 1154 aa14.96□□□□□ -0.01
RPGR-208ENST00000482855 P3H3Q8IVL6 736 aa14.95□□□□□ -0.02
RPGR-208ENST00000482855 IL27Q8NEV9 243 aa14.95□□□□□ -0.02
RPGR-208ENST00000482855 SMG6Q86US8 1419 aaKnown RBP14.93□□□□□ -0.02
RPGR-208ENST00000482855 AKNAQ7Z591 1439 aa14.93□□□□□ -0.02
RPGR-208ENST00000482855 NAIPQ13075 1403 aa14.92□□□□□ -0.02
RPGR-208ENST00000482855 PTPRKQ15262 1439 aa14.92□□□□□ -0.02
RPGR-208ENST00000482855 CASKIN1Q8WXD9 1431 aa14.92□□□□□ -0.02
RPGR-208ENST00000482855 CCDC7Q96M83 1385 aa14.92□□□□□ -0.02
RPGR-208ENST00000482855 DIP2BQ9P265 1576 aa14.91□□□□□ -0.02
RPGR-208ENST00000482855 FHOD3Q2V2M9 1422 aa14.91□□□□□ -0.02
RPGR-208ENST00000482855 FMN1Q68DA7 1419 aa14.91□□□□□ -0.02
RPGR-208ENST00000482855 RTN4Q9NQC3 1192 aaKnown RBP14.91□□□□□ -0.02
RPGR-208ENST00000482855 NCOA1Q15788 1441 aa14.91□□□□□ -0.02
RPGR-208ENST00000482855 PTPRGP23470 1445 aa14.89□□□□□ -0.03
RPGR-208ENST00000482855 ABCC10Q5T3U5 1492 aa14.89□□□□□ -0.03
RPGR-208ENST00000482855 NUDCQ9Y266 331 aa14.88□□□□□ -0.03
RPGR-208ENST00000482855 ZCCHC11Q5TAX3 1644 aaKnown RBP14.88□□□□□ -0.03
RPGR-208ENST00000482855 RNF123Q5XPI4 1314 aa14.88□□□□□ -0.03
RPGR-208ENST00000482855 CYB5RLQ6IPT4 315 aa14.88□□□□□ -0.03
RPGR-208ENST00000482855 PLB1Q6P1J6 1458 aa14.88□□□□□ -0.03
RPGR-208ENST00000482855 C11orf95C9JLR9 678 aaPredicted RBP14.87□□□□□ -0.03
RPGR-208ENST00000482855 USP35Q9P2H5 1018 aa14.86□□□□□ -0.03
RPGR-208ENST00000482855 MTUS2Q5JR59 1369 aa14.85□□□□□ -0.03
RPGR-208ENST00000482855 HECW1Q76N89 1606 aa14.85□□□□□ -0.03
RPGR-208ENST00000482855 MAP3K4Q9Y6R4 1608 aa14.84□□□□□ -0.03
RPGR-208ENST00000482855 NEFMP07197 916 aa14.84□□□□□ -0.03
RPGR-208ENST00000482855 POLR1AO95602 1720 aaPredicted RBP14.84□□□□□ -0.03
RPGR-208ENST00000482855 RAPGEF6Q8TEU7 1601 aa14.83□□□□□ -0.03
RPGR-208ENST00000482855 NPM2Q86SE8 214 aaKnown RBP14.83□□□□□ -0.04
RPGR-208ENST00000482855 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.82□□□□□ -0.04
RPGR-208ENST00000482855 LAS1LQ9Y4W2 734 aaKnown RBP14.82□□□□□ -0.04
RPGR-208ENST00000482855 MYOM3Q5VTT5 1437 aa14.81□□□□□ -0.04
RPGR-208ENST00000482855 L3MBTL2Q969R5 705 aa14.8□□□□□ -0.04
RPGR-208ENST00000482855 KIF7Q2M1P5 1343 aa14.8□□□□□ -0.04
RPGR-208ENST00000482855 GCC2Q8IWJ2 1684 aa14.79□□□□□ -0.04
RPGR-208ENST00000482855 WASHC2CQ9Y4E1 1318 aa14.79□□□□□ -0.04
RPGR-208ENST00000482855 PPM1GO15355 546 aaPredicted RBP14.79□□□□□ -0.04
RPGR-208ENST00000482855 DENND4BO75064 1496 aaPredicted RBP14.79□□□□□ -0.04
RPGR-208ENST00000482855 PPRC1Q5VV67 1664 aaKnown RBP14.79□□□□□ -0.04
RPGR-208ENST00000482855 TCERG1O14776 1098 aaKnown RBP14.78□□□□□ -0.04
RPGR-208ENST00000482855 SUPT6HQ7KZ85 1726 aaKnown RBP14.77□□□□□ -0.04
RPGR-208ENST00000482855 RRP7BPQ9NSQ0 103 aa14.77□□□□□ -0.04
RPGR-208ENST00000482855 UBE2Q2Q8WVN8 375 aa14.75□□□□□ -0.05
RPGR-208ENST00000482855 PDE4AP27815 886 aa14.74□□□□□ -0.05
RPGR-208ENST00000482855 ABCA9Q8IUA7 1624 aa14.74□□□□□ -0.05
RPGR-208ENST00000482855 WDR7Q9Y4E6 1490 aa14.74□□□□□ -0.05
RPGR-208ENST00000482855 EPRSP07814 1512 aaKnown RBP14.73□□□□□ -0.05
RPGR-208ENST00000482855 LRRIQ1Q96JM4 1722 aa14.73□□□□□ -0.05
RPGR-208ENST00000482855 MPHOSPH9Q99550 1183 aa14.73□□□□□ -0.05
RPGR-208ENST00000482855 SPATA31E1Q6ZUB1 1445 aa14.73□□□□□ -0.05
RPGR-208ENST00000482855 CHIC2Q9UKJ5 165 aa14.73□□□□□ -0.05
RPGR-208ENST00000482855 MAGI3Q5TCQ9 1506 aa14.72□□□□□ -0.05
RPGR-208ENST00000482855 EHBP1L1Q8N3D4 1523 aa14.72□□□□□ -0.05
RPGR-208ENST00000482855 CNGB1Q14028 1251 aaPredicted RBP14.72□□□□□ -0.05
RPGR-208ENST00000482855 NBPF8Q3BBV2 869 aa14.72□□□□□ -0.05
RPGR-208ENST00000482855 ASXL2Q76L83 1435 aa14.72□□□□□ -0.05
RPGR-208ENST00000482855 BACH2Q9BYV9 841 aa14.71□□□□□ -0.05
RPGR-208ENST00000482855 DHX29Q7Z478 1369 aaKnown RBP14.71□□□□□ -0.05
RPGR-208ENST00000482855 KDM6BO15054 1643 aa14.71□□□□□ -0.06
RPGR-208ENST00000482855 MS4A1P11836 297 aa14.7□□□□□ -0.06
RPGR-208ENST00000482855 NPM1P06748 294 aaKnown RBP eCLIP14.7□□□□□ -0.06
RPGR-208ENST00000482855 ARAP3Q8WWN8 1544 aa14.69□□□□□ -0.06
RPGR-208ENST00000482855 RPRD2Q5VT52 1461 aaKnown RBP14.69□□□□□ -0.06
RPGR-208ENST00000482855 TEX14Q8IWB6 1497 aa14.69□□□□□ -0.06
RPGR-208ENST00000482855 CFAP74Q9C0B2 1584 aa14.69□□□□□ -0.06
RPGR-208ENST00000482855 RRP1P56182 461 aaKnown RBP14.69□□□□□ -0.06
RPGR-208ENST00000482855 BRPF3Q9ULD4 1205 aa14.69□□□□□ -0.06
RPGR-208ENST00000482855 SENP3-EIF4A1A0A087X0R7 540 aa14.69□□□□□ -0.06
RPGR-208ENST00000482855 GSE1Q14687 1217 aa14.69□□□□□ -0.06
RPGR-208ENST00000482855 FOXD1Q16676 465 aa14.69□□□□□ -0.06
RPGR-208ENST00000482855 EXOC6Q8TAG9 804 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms