RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 UACAQ9BZF9 1416 aa19.76■□□□□ 0.75
COL9A2-207ENST00000482722 SUPT6HQ7KZ85 1726 aaKnown RBP19.75■□□□□ 0.75
COL9A2-207ENST00000482722 PRG4Q92954 1404 aaPredicted RBP19.75■□□□□ 0.75
COL9A2-207ENST00000482722 NUP153P49790 1475 aaKnown RBP19.75■□□□□ 0.75
COL9A2-207ENST00000482722 FOXD1Q16676 465 aa19.75■□□□□ 0.75
COL9A2-207ENST00000482722 NAIPQ13075 1403 aa19.74■□□□□ 0.75
COL9A2-207ENST00000482722 HECW1Q76N89 1606 aa19.74■□□□□ 0.75
COL9A2-207ENST00000482722 PTPN23Q9H3S7 1636 aa19.74■□□□□ 0.75
COL9A2-207ENST00000482722 MYT1LQ9UL68 1186 aa19.73■□□□□ 0.75
COL9A2-207ENST00000482722 EHBP1L1Q8N3D4 1523 aa19.73■□□□□ 0.75
COL9A2-207ENST00000482722 PRKCSHP14314 528 aaPredicted RBP19.72■□□□□ 0.75
COL9A2-207ENST00000482722 PPP4R2Q9NY27 417 aa19.67■□□□□ 0.74
COL9A2-207ENST00000482722 NUP160Q12769 1436 aa19.66■□□□□ 0.74
COL9A2-207ENST00000482722 CFDP1Q9UEE9 299 aaPredicted RBP19.65■□□□□ 0.74
COL9A2-207ENST00000482722 RAPGEF6Q8TEU7 1601 aa19.65■□□□□ 0.74
COL9A2-207ENST00000482722 CCDC184Q52MB2 194 aa19.64■□□□□ 0.73
COL9A2-207ENST00000482722 CARMIL2Q6F5E8 1435 aa19.63■□□□□ 0.73
COL9A2-207ENST00000482722 ERICH6BQ5W0A0 696 aa19.63■□□□□ 0.73
COL9A2-207ENST00000482722 ARHGEF11O15085 1522 aa19.63■□□□□ 0.73
COL9A2-207ENST00000482722 KDM6BO15054 1643 aa19.61■□□□□ 0.73
COL9A2-207ENST00000482722 HSPA5P11021 654 aaKnown RBP19.61■□□□□ 0.73
COL9A2-207ENST00000482722 WASHC2AQ641Q2 1341 aa19.6■□□□□ 0.73
COL9A2-207ENST00000482722 B4GALNT3Q6L9W6 998 aa19.6■□□□□ 0.73
COL9A2-207ENST00000482722 PLEKHD1A6NEE1 506 aa19.6■□□□□ 0.73
COL9A2-207ENST00000482722 CNGB1Q14028 1251 aaPredicted RBP19.6■□□□□ 0.73
COL9A2-207ENST00000482722 NBR1Q14596 966 aa19.58■□□□□ 0.72
COL9A2-207ENST00000482722 FAM9BQ8IZU0 186 aa19.58■□□□□ 0.72
COL9A2-207ENST00000482722 MPHOSPH9Q99550 1183 aa19.57■□□□□ 0.72
COL9A2-207ENST00000482722 NOP58Q9Y2X3 529 aaKnown RBP19.57■□□□□ 0.72
COL9A2-207ENST00000482722 KIF14Q15058 1648 aa19.56■□□□□ 0.72
COL9A2-207ENST00000482722 PTPRGP23470 1445 aa19.55■□□□□ 0.72
COL9A2-207ENST00000482722 PAK3O75914 559 aaPredicted RBP19.55■□□□□ 0.72
COL9A2-207ENST00000482722 CHD1O14646 1710 aa19.54■□□□□ 0.72
COL9A2-207ENST00000482722 L3MBTL2Q969R5 705 aa19.54■□□□□ 0.72
COL9A2-207ENST00000482722 EIF4G2P78344 907 aaKnown RBP eCLIP19.53■□□□□ 0.72
COL9A2-207ENST00000482722 ERCC6L2Q5T890 1561 aa19.53■□□□□ 0.72
COL9A2-207ENST00000482722 ATP10BO94823 1461 aa19.53■□□□□ 0.72
COL9A2-207ENST00000482722 TROQ12816 1431 aaPredicted RBP19.53■□□□□ 0.72
COL9A2-207ENST00000482722 KDM5BQ9UGL1 1544 aa19.53■□□□□ 0.72
COL9A2-207ENST00000482722 ABCC5O15440 1437 aa19.52■□□□□ 0.72
COL9A2-207ENST00000482722 HNRNPMP52272 730 aaKnown RBP eCLIP19.52■□□□□ 0.71
COL9A2-207ENST00000482722 DENND4BO75064 1496 aaPredicted RBP19.51■□□□□ 0.71
COL9A2-207ENST00000482722 TCOF1Q13428 1488 aaKnown RBP19.5■□□□□ 0.71
COL9A2-207ENST00000482722 MIA2Q96PC5 1412 aa19.49■□□□□ 0.71
COL9A2-207ENST00000482722 C11orf95C9JLR9 678 aaPredicted RBP19.49■□□□□ 0.71
COL9A2-207ENST00000482722 DAPK1P53355 1430 aa19.49■□□□□ 0.71
COL9A2-207ENST00000482722 GPATCH8Q9UKJ3 1502 aaKnown RBP19.48■□□□□ 0.71
COL9A2-207ENST00000482722 MRS2Q9HD23 443 aa19.47■□□□□ 0.71
COL9A2-207ENST00000482722 SLC4A1APQ9BWU0 796 aaKnown RBP19.46■□□□□ 0.71
COL9A2-207ENST00000482722 ANO8Q9HCE9 1232 aaPredicted RBP19.46■□□□□ 0.71
COL9A2-207ENST00000482722 SENP3-EIF4A1A0A087X0R7 540 aa19.46■□□□□ 0.71
COL9A2-207ENST00000482722 GCC2Q8IWJ2 1684 aa19.45■□□□□ 0.7
COL9A2-207ENST00000482722 PRKRIP1Q9H875 184 aaPredicted RBP19.43■□□□□ 0.7
COL9A2-207ENST00000482722 POLR3GLQ9BT43 218 aa19.42■□□□□ 0.7
COL9A2-207ENST00000482722 CAMSAP2Q08AD1 1489 aa19.42■□□□□ 0.7
COL9A2-207ENST00000482722 NBPF8Q3BBV2 869 aa19.42■□□□□ 0.7
COL9A2-207ENST00000482722 ZNF326Q5BKZ1 582 aaKnown RBP19.41■□□□□ 0.7
COL9A2-207ENST00000482722 ABCA8O94911 1581 aa19.41■□□□□ 0.7
COL9A2-207ENST00000482722 ZBED9Q6R2W3 1325 aa19.4■□□□□ 0.7
COL9A2-207ENST00000482722 CNTLNQ9NXG0 1405 aa19.38■□□□□ 0.69
COL9A2-207ENST00000482722 AKNAQ7Z591 1439 aa19.38■□□□□ 0.69
COL9A2-207ENST00000482722 IPO9Q96P70 1041 aaKnown RBP19.35■□□□□ 0.69
COL9A2-207ENST00000482722 CCDC7Q96M83 1385 aa19.35■□□□□ 0.69
COL9A2-207ENST00000482722 RTL5Q5HYW3 569 aaPredicted RBP19.34■□□□□ 0.69
COL9A2-207ENST00000482722 ANKRD30BQ9BXX2 1392 aa19.34■□□□□ 0.69
COL9A2-207ENST00000482722 DNMT1P26358 1616 aaKnown RBP19.34■□□□□ 0.69
COL9A2-207ENST00000482722 ANP32AP39687 249 aaKnown RBP19.34■□□□□ 0.69
COL9A2-207ENST00000482722 NCOA1Q15788 1441 aa19.34■□□□□ 0.69
COL9A2-207ENST00000482722 TSPY4P0CV99 314 aa19.34■□□□□ 0.69
COL9A2-207ENST00000482722 TSPY10P0CW01 314 aa19.34■□□□□ 0.69
COL9A2-207ENST00000482722 SALL2Q9Y467 1007 aaPredicted RBP19.33■□□□□ 0.69
COL9A2-207ENST00000482722 PKD2Q13563 968 aa19.32■□□□□ 0.68
COL9A2-207ENST00000482722 CDC42BPAQ5VT25 1732 aa19.31■□□□□ 0.68
COL9A2-207ENST00000482722 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.3■□□□□ 0.682e-6■■□□□ 11.7
COL9A2-207ENST00000482722 ABCC10Q5T3U5 1492 aa19.3■□□□□ 0.68
COL9A2-207ENST00000482722 RPRD2Q5VT52 1461 aaKnown RBP19.3■□□□□ 0.68
COL9A2-207ENST00000482722 ZBTB47Q9UFB7 747 aaPredicted RBP19.3■□□□□ 0.68
COL9A2-207ENST00000482722 KIF7Q2M1P5 1343 aa19.29■□□□□ 0.68
COL9A2-207ENST00000482722 IL27Q8NEV9 243 aa19.29■□□□□ 0.68
COL9A2-207ENST00000482722 ROCK1Q13464 1354 aa19.29■□□□□ 0.68
COL9A2-207ENST00000482722 CCDC136Q96JN2 1154 aa19.27■□□□□ 0.68
COL9A2-207ENST00000482722 TEX14Q8IWB6 1497 aa19.26■□□□□ 0.67
COL9A2-207ENST00000482722 NUP155O75694 1391 aa19.25■□□□□ 0.67
COL9A2-207ENST00000482722 ANKRD30AQ9BXX3 1397 aa19.25■□□□□ 0.67
COL9A2-207ENST00000482722 ANKRD50Q9ULJ7 1429 aa19.24■□□□□ 0.67
COL9A2-207ENST00000482722 C9orf84Q5VXU9 1444 aa19.24■□□□□ 0.67
COL9A2-207ENST00000482722 ITSN2Q9NZM3 1697 aa19.23■□□□□ 0.67
COL9A2-207ENST00000482722 SMG6Q86US8 1419 aaKnown RBP19.23■□□□□ 0.67
COL9A2-207ENST00000482722 RTN4Q9NQC3 1192 aaKnown RBP19.22■□□□□ 0.67
COL9A2-207ENST00000482722 KDM2AQ9Y2K7 1162 aa19.22■□□□□ 0.67
COL9A2-207ENST00000482722 ADCY10Q96PN6 1610 aa19.22■□□□□ 0.67
COL9A2-207ENST00000482722 PZPP20742 1482 aa19.21■□□□□ 0.67
COL9A2-207ENST00000482722 KIF15Q9NS87 1388 aa19.2■□□□□ 0.66
COL9A2-207ENST00000482722 TTC37Q6PGP7 1564 aa19.19■□□□□ 0.66
COL9A2-207ENST00000482722 SHROOM2Q13796 1616 aa19.19■□□□□ 0.66
COL9A2-207ENST00000482722 NUDCQ9Y266 331 aa19.19■□□□□ 0.66
COL9A2-207ENST00000482722 CDC42BPBQ9Y5S2 1711 aa19.19■□□□□ 0.66
COL9A2-207ENST00000482722 RNF123Q5XPI4 1314 aa19.19■□□□□ 0.66
COL9A2-207ENST00000482722 ARHGAP5Q13017 1502 aa19.18■□□□□ 0.66
COL9A2-207ENST00000482722 AFAP1Q8N556 730 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms