RNA–Protein interactions for RNA: ENST00000482623.5

FAM3D-202, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 3

Gene FAM3D, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-202ENST00000482623 BCORL1Q5H9F3 1711 aa19.62■□□□□ 0.73
FAM3D-202ENST00000482623 ZFYVE16Q7Z3T8 1539 aa19.62■□□□□ 0.73
FAM3D-202ENST00000482623 ATP10AO60312 1499 aa19.61■□□□□ 0.73
FAM3D-202ENST00000482623 KIF14Q15058 1648 aa19.61■□□□□ 0.73
FAM3D-202ENST00000482623 ZNF518AQ6AHZ1 1483 aa19.6■□□□□ 0.73
FAM3D-202ENST00000482623 YEATS2Q9ULM3 1422 aa19.59■□□□□ 0.73
FAM3D-202ENST00000482623 FYCO1Q9BQS8 1478 aa19.57■□□□□ 0.72
FAM3D-202ENST00000482623 AFAP1Q8N556 730 aa19.56■□□□□ 0.72
FAM3D-202ENST00000482623 MYO5CQ9NQX4 1742 aa19.56■□□□□ 0.72
FAM3D-202ENST00000482623 C9orf84Q5VXU9 1444 aa19.55■□□□□ 0.72
FAM3D-202ENST00000482623 ARHGAP5Q13017 1502 aa19.55■□□□□ 0.72
FAM3D-202ENST00000482623 MLH3Q9UHC1 1453 aa19.53■□□□□ 0.72
FAM3D-202ENST00000482623 MADDQ8WXG6 1647 aa19.52■□□□□ 0.72
FAM3D-202ENST00000482623 ILDR1Q86SU0 546 aaPredicted RBP19.52■□□□□ 0.72
FAM3D-202ENST00000482623 KDM5CP41229 1560 aa19.51■□□□□ 0.71
FAM3D-202ENST00000482623 PCF11O94913 1555 aaKnown RBP19.49■□□□□ 0.71
FAM3D-202ENST00000482623 MLECQ14165 292 aa19.47■□□□□ 0.71
FAM3D-202ENST00000482623 ARHGEF12Q9NZN5 1544 aa19.46■□□□□ 0.71
FAM3D-202ENST00000482623 REREQ9P2R6 1566 aa19.46■□□□□ 0.71
FAM3D-202ENST00000482623 MYT1LQ9UL68 1186 aa19.46■□□□□ 0.71
FAM3D-202ENST00000482623 LMTK3Q96Q04 1460 aa19.46■□□□□ 0.71
FAM3D-202ENST00000482623 LRRIQ1Q96JM4 1722 aa19.45■□□□□ 0.7
FAM3D-202ENST00000482623 KIAA1107Q9UPP5 1409 aa19.45■□□□□ 0.7
FAM3D-202ENST00000482623 TRAPPC8Q9Y2L5 1435 aa19.43■□□□□ 0.7
FAM3D-202ENST00000482623 CDC42BPBQ9Y5S2 1711 aa19.43■□□□□ 0.7
FAM3D-202ENST00000482623 GPATCH8Q9UKJ3 1502 aaKnown RBP19.43■□□□□ 0.7
FAM3D-202ENST00000482623 PREX2Q70Z35 1606 aa19.43■□□□□ 0.7
FAM3D-202ENST00000482623 ABCC1P33527 1531 aa19.42■□□□□ 0.7
FAM3D-202ENST00000482623 AGLP35573 1532 aa19.42■□□□□ 0.7
FAM3D-202ENST00000482623 CFDP1Q9UEE9 299 aaPredicted RBP19.42■□□□□ 0.7
FAM3D-202ENST00000482623 RIMS1Q86UR5 1692 aaKnown RBP19.42■□□□□ 0.7
FAM3D-202ENST00000482623 PLEKHH2Q8IVE3 1493 aa19.41■□□□□ 0.7
FAM3D-202ENST00000482623 MTUS2Q5JR59 1369 aa19.4■□□□□ 0.7
FAM3D-202ENST00000482623 CCNB3Q8WWL7 1395 aa19.4■□□□□ 0.7
FAM3D-202ENST00000482623 SIGLEC1Q9BZZ2 1709 aa19.39■□□□□ 0.69
FAM3D-202ENST00000482623 FBXO41Q8TF61 875 aa19.38■□□□□ 0.69
FAM3D-202ENST00000482623 ESF1Q9H501 851 aaKnown RBP19.38■□□□□ 0.69
FAM3D-202ENST00000482623 ZNF777Q9ULD5 760 aaPredicted RBP19.38■□□□□ 0.69
FAM3D-202ENST00000482623 DIP2CQ9Y2E4 1556 aa19.37■□□□□ 0.69
FAM3D-202ENST00000482623 SPAG9O60271 1321 aaKnown RBP19.37■□□□□ 0.69
FAM3D-202ENST00000482623 PPP6R1Q9UPN7 881 aa19.36■□□□□ 0.69
FAM3D-202ENST00000482623 DMRT2Q9Y5R5 561 aa19.36■□□□□ 0.69
FAM3D-202ENST00000482623 CNTLNQ9NXG0 1405 aa19.35■□□□□ 0.69
FAM3D-202ENST00000482623 HNRNPMP52272 730 aaKnown RBP eCLIP19.35■□□□□ 0.69
FAM3D-202ENST00000482623 RSPH4AQ5TD94 716 aa19.35■□□□□ 0.69
FAM3D-202ENST00000482623 CDC42BPAQ5VT25 1732 aa19.34■□□□□ 0.69
FAM3D-202ENST00000482623 CEP162Q5TB80 1403 aa19.34■□□□□ 0.69
FAM3D-202ENST00000482623 HSPA2P54652 639 aa19.33■□□□□ 0.68
FAM3D-202ENST00000482623 FER1L4A9Z1Z3 1794 aa19.33■□□□□ 0.68
FAM3D-202ENST00000482623 CEBPAP49715 358 aaPredicted RBP19.32■□□□□ 0.68
FAM3D-202ENST00000482623 PLPPR3Q6T4P5 718 aa19.32■□□□□ 0.68
FAM3D-202ENST00000482623 ITSN2Q9NZM3 1697 aa19.32■□□□□ 0.68
FAM3D-202ENST00000482623 SETD1BQ9UPS6 1966 aaKnown RBP19.32■□□□□ 0.68
FAM3D-202ENST00000482623 SAMD9LQ8IVG5 1584 aa19.31■□□□□ 0.68
FAM3D-202ENST00000482623 ABCA6Q8N139 1617 aa19.29■□□□□ 0.68
FAM3D-202ENST00000482623 KIDINS220Q9ULH0 1771 aa19.29■□□□□ 0.68
FAM3D-202ENST00000482623 UHRF1BP1Q6BDS2 1440 aa19.28■□□□□ 0.68
FAM3D-202ENST00000482623 RTEL1-TNFRSF6BF6WH68 1400 aa19.27■□□□□ 0.68
FAM3D-202ENST00000482623 EHBP1L1Q8N3D4 1523 aa19.27■□□□□ 0.68
FAM3D-202ENST00000482623 SYCP2Q9BX26 1530 aa19.26■□□□□ 0.67
FAM3D-202ENST00000482623 NPATQ14207 1427 aa19.25■□□□□ 0.67
FAM3D-202ENST00000482623 MBD5Q9P267 1494 aa19.24■□□□□ 0.67
FAM3D-202ENST00000482623 A2MP01023 1474 aa19.23■□□□□ 0.67
FAM3D-202ENST00000482623 ZMYM3Q14202 1370 aa19.23■□□□□ 0.67
FAM3D-202ENST00000482623 PREX1Q8TCU6 1659 aa19.23■□□□□ 0.67
FAM3D-202ENST00000482623 ATP7AQ04656 1500 aa19.22■□□□□ 0.67
FAM3D-202ENST00000482623 ZNF644Q9H582 1327 aaPredicted RBP19.22■□□□□ 0.67
FAM3D-202ENST00000482623 CERKQ8TCT0 537 aa19.2■□□□□ 0.66
FAM3D-202ENST00000482623 DHX29Q7Z478 1369 aaKnown RBP19.19■□□□□ 0.66
FAM3D-202ENST00000482623 TIAM1Q13009 1591 aa19.19■□□□□ 0.66
FAM3D-202ENST00000482623 PLXNC1O60486 1568 aa19.18■□□□□ 0.66
FAM3D-202ENST00000482623 INO80Q9ULG1 1556 aaPredicted RBP19.18■□□□□ 0.66
FAM3D-202ENST00000482623 PTPRTO14522 1441 aa19.17■□□□□ 0.66
FAM3D-202ENST00000482623 VPS8Q8N3P4 1428 aa19.17■□□□□ 0.66
FAM3D-202ENST00000482623 NCOA2Q15596 1464 aa19.17■□□□□ 0.66
FAM3D-202ENST00000482623 MAP3K1Q13233 1512 aa19.17■□□□□ 0.66
FAM3D-202ENST00000482623 LOC105371045A0A1W2PR82 267 aa19.16■□□□□ 0.66
FAM3D-202ENST00000482623 TSPY4P0CV99 314 aa19.16■□□□□ 0.66
FAM3D-202ENST00000482623 TSPY10P0CW01 314 aa19.16■□□□□ 0.66
FAM3D-202ENST00000482623 GGT6Q6P531 493 aa19.15■□□□□ 0.66
FAM3D-202ENST00000482623 MROH2AA6NES4 1674 aa19.14■□□□□ 0.66
FAM3D-202ENST00000482623 C3P01024 1663 aa19.14■□□□□ 0.66
FAM3D-202ENST00000482623 CCDC141Q6ZP82 1450 aa19.12■□□□□ 0.65
FAM3D-202ENST00000482623 LRRC9Q6ZRR7 1453 aa19.12■□□□□ 0.65
FAM3D-202ENST00000482623 SUPT6HQ7KZ85 1726 aaKnown RBP19.11■□□□□ 0.65
FAM3D-202ENST00000482623 ADGBQ8N7X0 1667 aa19.1■□□□□ 0.65
FAM3D-202ENST00000482623 FAM135AQ9P2D6 1515 aa19.1■□□□□ 0.65
FAM3D-202ENST00000482623 PTPRKQ15262 1439 aa19.09■□□□□ 0.65
FAM3D-202ENST00000482623 PKD2Q13563 968 aa19.09■□□□□ 0.65
FAM3D-202ENST00000482623 NCOA1Q15788 1441 aa19.08■□□□□ 0.65
FAM3D-202ENST00000482623 MIA2Q96PC5 1412 aa19.08■□□□□ 0.65
FAM3D-202ENST00000482623 CAMSAP2Q08AD1 1489 aa19.08■□□□□ 0.64
FAM3D-202ENST00000482623 KIF3BO15066 747 aa19.07■□□□□ 0.64
FAM3D-202ENST00000482623 ARHGEF5Q12774 1597 aa19.06■□□□□ 0.64
FAM3D-202ENST00000482623 STRCQ7RTU9 1775 aa19.06■□□□□ 0.64
FAM3D-202ENST00000482623 APLP2Q06481 763 aa19.04■□□□□ 0.64
FAM3D-202ENST00000482623 KANK4Q5T7N3 995 aaPredicted RBP19.04■□□□□ 0.64
FAM3D-202ENST00000482623 PLA2R1Q13018 1463 aa19.03■□□□□ 0.64
FAM3D-202ENST00000482623 WASHC2CQ9Y4E1 1318 aa19.03■□□□□ 0.64
FAM3D-202ENST00000482623 MYOM3Q5VTT5 1437 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms