RNA–Protein interactions for RNA: ENST00000482007.5

RAD51C-209, Transcript of RAD51 paralog C, humanhuman

TSL 1 (best)

Gene RAD51C, Length 1,098 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51C-209ENST00000482007 LHX8Q68G74 356 aa12.88□□□□□ -0.35
RAD51C-209ENST00000482007 CFAP44Q96MT7 982 aa12.88□□□□□ -0.35
RAD51C-209ENST00000482007 SPRYD3Q8NCJ5 442 aa12.87□□□□□ -0.35
RAD51C-209ENST00000482007 L3MBTL3Q96JM7 780 aaPredicted RBP12.85□□□□□ -0.35
RAD51C-209ENST00000482007 RYDENQ9NUL5 291 aaKnown RBP12.85□□□□□ -0.35
RAD51C-209ENST00000482007 BOLA1Q9Y3E2 137 aa12.84□□□□□ -0.35
RAD51C-209ENST00000482007 ERCC6Q03468 1493 aa12.84□□□□□ -0.35
RAD51C-209ENST00000482007 HMGXB3Q12766 1538 aa12.82□□□□□ -0.36
RAD51C-209ENST00000482007 G3V3G9 751 aa12.81□□□□□ -0.36
RAD51C-209ENST00000482007 KIF21AQ7Z4S6 1674 aa12.8□□□□□ -0.36
RAD51C-209ENST00000482007 MICALL2Q8IY33 904 aa12.79□□□□□ -0.36
RAD51C-209ENST00000482007 NCAPD3P42695 1498 aa12.78□□□□□ -0.36
RAD51C-209ENST00000482007 TMEM121BQ9BXQ6 578 aaPredicted RBP12.77□□□□□ -0.37
RAD51C-209ENST00000482007 SMARCA4P51532 1647 aa12.76□□□□□ -0.37
RAD51C-209ENST00000482007 OTUD5Q96G74 571 aa12.75□□□□□ -0.37
RAD51C-209ENST00000482007 MAMSTRQ6ZN01 415 aa12.73□□□□□ -0.37
RAD51C-209ENST00000482007 C3orf67Q6ZVT6 689 aa12.73□□□□□ -0.37
RAD51C-209ENST00000482007 SCUBE2Q9NQ36 999 aa12.73□□□□□ -0.37
RAD51C-209ENST00000482007 PLCB2Q00722 1185 aa12.72□□□□□ -0.37
RAD51C-209ENST00000482007 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.72□□□□□ -0.37
RAD51C-209ENST00000482007 NESP48681 1621 aa12.72□□□□□ -0.37
RAD51C-209ENST00000482007 SMARCA2P51531 1590 aa12.72□□□□□ -0.37
RAD51C-209ENST00000482007 ATAD2BQ9ULI0 1458 aa12.7□□□□□ -0.38
RAD51C-209ENST00000482007 LAMC3Q9Y6N6 1575 aa12.69□□□□□ -0.38
RAD51C-209ENST00000482007 PEG3Q9GZU2 1588 aa12.67□□□□□ -0.38
RAD51C-209ENST00000482007 TMEM92Q6UXU6 159 aa12.66□□□□□ -0.38
RAD51C-209ENST00000482007 SLAIN1Q8ND83 568 aa12.66□□□□□ -0.38
RAD51C-209ENST00000482007 CADPS2Q86UW7 1296 aa12.65□□□□□ -0.38
RAD51C-209ENST00000482007 TSHZ2Q9NRE2 1034 aa12.64□□□□□ -0.39
RAD51C-209ENST00000482007 C2orf72A6NCS6 295 aa12.58□□□□□ -0.4
RAD51C-209ENST00000482007 HAP1P54257 671 aaPredicted RBP12.58□□□□□ -0.4
RAD51C-209ENST00000482007 BAZ1AQ9NRL2 1556 aaPredicted RBP12.57□□□□□ -0.4
RAD51C-209ENST00000482007 TMC2Q8TDI7 906 aa12.57□□□□□ -0.4
RAD51C-209ENST00000482007 NCKAP5LQ9HCH0 1330 aa12.56□□□□□ -0.4
RAD51C-209ENST00000482007 BAZ1BQ9UIG0 1483 aaKnown RBP12.55□□□□□ -0.4
RAD51C-209ENST00000482007 KIF3CO14782 793 aa12.55□□□□□ -0.4
RAD51C-209ENST00000482007 PDE4AP27815 886 aa12.54□□□□□ -0.4
RAD51C-209ENST00000482007 GPHNQ9NQX3 736 aaPredicted RBP12.54□□□□□ -0.4
RAD51C-209ENST00000482007 WDR62O43379 1518 aa12.53□□□□□ -0.4
RAD51C-209ENST00000482007 LARP6Q9BRS8 491 aaKnown RBP12.53□□□□□ -0.4
RAD51C-209ENST00000482007 CRISPLD2Q9H0B8 497 aa12.53□□□□□ -0.4
RAD51C-209ENST00000482007 DSG2Q14126 1118 aa12.49□□□□□ -0.41
RAD51C-209ENST00000482007 FOXK1P85037 733 aa12.46□□□□□ -0.41
RAD51C-209ENST00000482007 PRDM2Q13029 1718 aa12.45□□□□□ -0.42
RAD51C-209ENST00000482007 PLPP6Q8IY26 295 aa12.45□□□□□ -0.42
RAD51C-209ENST00000482007 DDX27Q96GQ7 796 aaKnown RBP12.45□□□□□ -0.42
RAD51C-209ENST00000482007 MRC2Q9UBG0 1479 aa12.45□□□□□ -0.42
RAD51C-209ENST00000482007 PPP1R15BQ5SWA1 713 aa12.43□□□□□ -0.42
RAD51C-209ENST00000482007 MFSD10Q14728 455 aa12.42□□□□□ -0.42
RAD51C-209ENST00000482007 PDS5BQ9NTI5 1447 aa12.42□□□□□ -0.42
RAD51C-209ENST00000482007 HOXB3P14651 431 aaPredicted RBP12.41□□□□□ -0.42
RAD51C-209ENST00000482007 FAM163AQ96GL9 167 aaPredicted RBP12.4□□□□□ -0.42
RAD51C-209ENST00000482007 WDR70Q9NW82 654 aa12.4□□□□□ -0.42
RAD51C-209ENST00000482007 MROH2BQ7Z745 1585 aa12.39□□□□□ -0.43
RAD51C-209ENST00000482007 SNPHO15079 494 aa12.39□□□□□ -0.43
RAD51C-209ENST00000482007 KDM2AQ9Y2K7 1162 aa12.39□□□□□ -0.43
RAD51C-209ENST00000482007 RIMBP3CA6NJZ7 1639 aa12.37□□□□□ -0.43
RAD51C-209ENST00000482007 RIMBP3BA6NNM3 1639 aa12.37□□□□□ -0.43
RAD51C-209ENST00000482007 RIMBP3Q9UFD9 1639 aa12.37□□□□□ -0.43
RAD51C-209ENST00000482007 DOK7Q18PE1 504 aa12.36□□□□□ -0.43
RAD51C-209ENST00000482007 ZNF710Q8N1W2 664 aa12.34□□□□□ -0.43
RAD51C-209ENST00000482007 WIZO95785 1651 aa12.32□□□□□ -0.44
RAD51C-209ENST00000482007 ST18O60284 1047 aa12.32□□□□□ -0.44
RAD51C-209ENST00000482007 VSIG10Q8N0Z9 540 aa12.32□□□□□ -0.44
RAD51C-209ENST00000482007 CEP164Q9UPV0 1460 aa12.32□□□□□ -0.44
RAD51C-209ENST00000482007 UPF1Q92900 1129 aaKnown RBP eCLIP12.31□□□□□ -0.44
RAD51C-209ENST00000482007 SLC34A2O95436 690 aa12.3□□□□□ -0.44
RAD51C-209ENST00000482007 EMILIN3Q9NT22 766 aa12.3□□□□□ -0.44
RAD51C-209ENST00000482007 RIMBP2O15034 1052 aa12.29□□□□□ -0.44
RAD51C-209ENST00000482007 E2F4Q16254 413 aa12.29□□□□□ -0.44
RAD51C-209ENST00000482007 ARSIQ5FYB1 569 aa12.29□□□□□ -0.44
RAD51C-209ENST00000482007 KHSRPQ92945 711 aaKnown RBP eCLIP12.29□□□□□ -0.441e-8■□□□□ 8.7
RAD51C-209ENST00000482007 CADPSQ9ULU8 1353 aa12.29□□□□□ -0.44
RAD51C-209ENST00000482007 CAMK2BQ13554 666 aa12.28□□□□□ -0.44
RAD51C-209ENST00000482007 LCE2DQ5TA82 110 aaPredicted RBP12.28□□□□□ -0.44
RAD51C-209ENST00000482007 GPR153Q6NV75 609 aa12.27□□□□□ -0.45
RAD51C-209ENST00000482007 PTCD2Q8WV60 388 aaKnown RBP12.27□□□□□ -0.45
RAD51C-209ENST00000482007 PCDHGA4Q9Y5G9 962 aa12.27□□□□□ -0.45
RAD51C-209ENST00000482007 OXER1Q8TDS5 423 aa12.26□□□□□ -0.45
RAD51C-209ENST00000482007 CHD1O14646 1710 aa12.24□□□□□ -0.45
RAD51C-209ENST00000482007 ZSWIM6Q9HCJ5 1215 aa12.24□□□□□ -0.45
RAD51C-209ENST00000482007 FANCD2Q9BXW9 1451 aa12.23□□□□□ -0.45
RAD51C-209ENST00000482007 SLC24A1O60721 1099 aa12.23□□□□□ -0.45
RAD51C-209ENST00000482007 HOXB1P14653 301 aaPredicted RBP12.23□□□□□ -0.45
RAD51C-209ENST00000482007 MARVELD3Q96A59 401 aa12.23□□□□□ -0.45
RAD51C-209ENST00000482007 TBC1D12O60347 775 aa12.22□□□□□ -0.45
RAD51C-209ENST00000482007 MAP3K9P80192 1104 aa12.22□□□□□ -0.45
RAD51C-209ENST00000482007 ARHGEF11O15085 1522 aa12.21□□□□□ -0.45
RAD51C-209ENST00000482007 URB2Q14146 1524 aaKnown RBP12.21□□□□□ -0.45
RAD51C-209ENST00000482007 DPYSL4O14531 572 aa12.21□□□□□ -0.45
RAD51C-209ENST00000482007 NUDT7P0C024 238 aa12.21□□□□□ -0.45
RAD51C-209ENST00000482007 KCNV2Q8TDN2 545 aa12.2□□□□□ -0.46
RAD51C-209ENST00000482007 EIF4G3O43432 1585 aaKnown RBP12.18□□□□□ -0.46
RAD51C-209ENST00000482007 CFTRP13569 1480 aa12.17□□□□□ -0.46
RAD51C-209ENST00000482007 KDM4FA0A1W2PPD8 638 aa12.15□□□□□ -0.46
RAD51C-209ENST00000482007 EVI5O60447 810 aa12.15□□□□□ -0.46
RAD51C-209ENST00000482007 EMP3P54852 163 aa12.15□□□□□ -0.46
RAD51C-209ENST00000482007 TOP2AP11388 1531 aaKnown RBP12.12□□□□□ -0.47
RAD51C-209ENST00000482007 P3H3Q8IVL6 736 aa12.12□□□□□ -0.47
RAD51C-209ENST00000482007 LHX6Q9UPM6 363 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms