RNA–Protein interactions for RNA: ENST00000481456.1

DDX39B-219, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 5,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-219ENST00000481456 PDE4AP27815 886 aa14.93□□□□□ -0.02
DDX39B-219ENST00000481456 CUX1P39880 1505 aa14.93□□□□□ -0.02
DDX39B-219ENST00000481456 TMF1P82094 1093 aa14.92□□□□□ -0.02
DDX39B-219ENST00000481456 CADPSQ9ULU8 1353 aa14.92□□□□□ -0.02
DDX39B-219ENST00000481456 RRP1P56182 461 aaKnown RBP14.91□□□□□ -0.02
DDX39B-219ENST00000481456 CHMP7Q8WUX9 453 aaPredicted RBP14.91□□□□□ -0.02
DDX39B-219ENST00000481456 MYBBP1AQ9BQG0 1328 aaKnown RBP14.91□□□□□ -0.02
DDX39B-219ENST00000481456 MSH5O43196 834 aa14.9□□□□□ -0.02
DDX39B-219ENST00000481456 NAP1L5Q96NT1 182 aaPredicted RBP14.9□□□□□ -0.02
DDX39B-219ENST00000481456 NLRP13Q86W25 1043 aa14.9□□□□□ -0.02
DDX39B-219ENST00000481456 MS4A1P11836 297 aa14.89□□□□□ -0.03
DDX39B-219ENST00000481456 MYOM3Q5VTT5 1437 aa14.89□□□□□ -0.03
DDX39B-219ENST00000481456 CASKIN1Q8WXD9 1431 aa14.89□□□□□ -0.03
DDX39B-219ENST00000481456 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.89□□□□□ -0.03
DDX39B-219ENST00000481456 FYCO1Q9BQS8 1478 aa14.88□□□□□ -0.03
DDX39B-219ENST00000481456 EXOC6Q8TAG9 804 aa14.87□□□□□ -0.03
DDX39B-219ENST00000481456 KIF7Q2M1P5 1343 aa14.87□□□□□ -0.03
DDX39B-219ENST00000481456 GOLGA6L22H0YM25 854 aa14.87□□□□□ -0.03
DDX39B-219ENST00000481456 CHGAP10645 457 aaKnown RBP14.86□□□□□ -0.03
DDX39B-219ENST00000481456 USP47Q96K76 1375 aa14.86□□□□□ -0.03
DDX39B-219ENST00000481456 ESF1Q9H501 851 aaKnown RBP14.86□□□□□ -0.03
DDX39B-219ENST00000481456 SLC24A1O60721 1099 aa14.85□□□□□ -0.03
DDX39B-219ENST00000481456 GSE1Q14687 1217 aa14.85□□□□□ -0.03
DDX39B-219ENST00000481456 ANKRD30AQ9BXX3 1397 aa14.85□□□□□ -0.03
DDX39B-219ENST00000481456 FGD5Q6ZNL6 1462 aa14.85□□□□□ -0.03
DDX39B-219ENST00000481456 FRAT1Q92837 279 aaPredicted RBP14.84□□□□□ -0.03
DDX39B-219ENST00000481456 FTSJ3Q8IY81 847 aaKnown RBP14.83□□□□□ -0.04
DDX39B-219ENST00000481456 TDRD9Q8NDG6 1382 aaKnown RBP14.83□□□□□ -0.04
DDX39B-219ENST00000481456 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.83□□□□□ -0.04
DDX39B-219ENST00000481456 NUP155O75694 1391 aa14.83□□□□□ -0.04
DDX39B-219ENST00000481456 CFAP53Q96M91 514 aa14.83□□□□□ -0.04
DDX39B-219ENST00000481456 ARID4BQ4LE39 1312 aaPredicted RBP14.82□□□□□ -0.04
DDX39B-219ENST00000481456 HFM1A2PYH4 1435 aa14.82□□□□□ -0.04
DDX39B-219ENST00000481456 MAP3K1Q13233 1512 aa14.81□□□□□ -0.04
DDX39B-219ENST00000481456 NCOA2Q15596 1464 aa14.81□□□□□ -0.04
DDX39B-219ENST00000481456 MYH16Q9H6N6 1097 aa14.81□□□□□ -0.04
DDX39B-219ENST00000481456 CENPQQ7L2Z9 268 aaPredicted RBP14.8□□□□□ -0.04
DDX39B-219ENST00000481456 PAK3O75914 559 aaPredicted RBP14.8□□□□□ -0.04
DDX39B-219ENST00000481456 FAM161AQ3B820 660 aa14.79□□□□□ -0.04
DDX39B-219ENST00000481456 SMG6Q86US8 1419 aaKnown RBP14.79□□□□□ -0.04
DDX39B-219ENST00000481456 NEUROD2Q15784 382 aa14.79□□□□□ -0.04
DDX39B-219ENST00000481456 EFCAB5A4FU69 1503 aa14.78□□□□□ -0.04
DDX39B-219ENST00000481456 GOLGA2Q08379 1002 aa14.78□□□□□ -0.04
DDX39B-219ENST00000481456 ST20-MTHFSA0A0A6YYL1 179 aa14.77□□□□□ -0.04
DDX39B-219ENST00000481456 MAPKBP1O60336 1514 aa14.77□□□□□ -0.04
DDX39B-219ENST00000481456 HSCBQ8IWL3 235 aa14.77□□□□□ -0.04
DDX39B-219ENST00000481456 CRBNQ96SW2 442 aa14.77□□□□□ -0.05
DDX39B-219ENST00000481456 RSPH6AQ9H0K4 717 aa14.76□□□□□ -0.05
DDX39B-219ENST00000481456 AKNAQ7Z591 1439 aa14.76□□□□□ -0.05
DDX39B-219ENST00000481456 NCAPD3P42695 1498 aa14.76□□□□□ -0.05
DDX39B-219ENST00000481456 NPM1P06748 294 aaKnown RBP eCLIP14.76□□□□□ -0.05
DDX39B-219ENST00000481456 SLKQ9H2G2 1235 aaPredicted RBP14.76□□□□□ -0.05
DDX39B-219ENST00000481456 FANCD2Q9BXW9 1451 aa14.75□□□□□ -0.05
DDX39B-219ENST00000481456 PLIN1O60240 522 aa14.75□□□□□ -0.05
DDX39B-219ENST00000481456 HSP90AB1P08238 724 aaKnown RBP14.74□□□□□ -0.05
DDX39B-219ENST00000481456 SLC4A3P48751 1232 aa14.74□□□□□ -0.05
DDX39B-219ENST00000481456 CFTRP13569 1480 aa14.73□□□□□ -0.05
DDX39B-219ENST00000481456 CCDC184Q52MB2 194 aa14.73□□□□□ -0.05
DDX39B-219ENST00000481456 BRD4O60885 1362 aaPredicted RBP14.73□□□□□ -0.05
DDX39B-219ENST00000481456 GOLGA6L3A6NEY3 463 aa14.72□□□□□ -0.05
DDX39B-219ENST00000481456 NCLP19338 710 aaKnown RBP14.72□□□□□ -0.05
DDX39B-219ENST00000481456 PNNQ9H307 717 aaKnown RBP14.72□□□□□ -0.05
DDX39B-219ENST00000481456 SPRYD3Q8NCJ5 442 aa14.71□□□□□ -0.05
DDX39B-219ENST00000481456 PMFBP1Q8TBY8 1022 aa14.71□□□□□ -0.05
DDX39B-219ENST00000481456 EHBP1L1Q8N3D4 1523 aa14.7□□□□□ -0.06
DDX39B-219ENST00000481456 PDS5BQ9NTI5 1447 aa14.7□□□□□ -0.06
DDX39B-219ENST00000481456 RWDD1Q9H446 243 aaPredicted RBP14.7□□□□□ -0.06
DDX39B-219ENST00000481456 STAG3Q9UJ98 1225 aa14.69□□□□□ -0.06
DDX39B-219ENST00000481456 PCF11O94913 1555 aaKnown RBP14.69□□□□□ -0.06
DDX39B-219ENST00000481456 NFKBIBQ15653 356 aa14.69□□□□□ -0.06
DDX39B-219ENST00000481456 RAD54L2Q9Y4B4 1467 aa14.68□□□□□ -0.06
DDX39B-219ENST00000481456 MAPK8IP3Q9UPT6 1336 aa14.68□□□□□ -0.06
DDX39B-219ENST00000481456 NAIPQ13075 1403 aa14.68□□□□□ -0.06
DDX39B-219ENST00000481456 BIVM-ERCC5R4GMW8 1640 aa14.68□□□□□ -0.06
DDX39B-219ENST00000481456 PEG3Q9GZU2 1588 aa14.68□□□□□ -0.06
DDX39B-219ENST00000481456 CHMP4BQ9H444 224 aaKnown RBP14.68□□□□□ -0.06
DDX39B-219ENST00000481456 MIA2Q96PC5 1412 aa14.67□□□□□ -0.06
DDX39B-219ENST00000481456 PTMSP20962 102 aa14.67□□□□□ -0.06
DDX39B-219ENST00000481456 PANK3Q9H999 370 aa14.67□□□□□ -0.06
DDX39B-219ENST00000481456 GZF1Q9H116 711 aaPredicted RBP14.67□□□□□ -0.06
DDX39B-219ENST00000481456 TNNT2P45379 298 aaPredicted RBP14.66□□□□□ -0.06
DDX39B-219ENST00000481456 CASC1Q6TDU7 716 aa14.66□□□□□ -0.06
DDX39B-219ENST00000481456 NBPF8Q3BBV2 869 aa14.65□□□□□ -0.06
DDX39B-219ENST00000481456 IL27Q8NEV9 243 aa14.65□□□□□ -0.06
DDX39B-219ENST00000481456 BACH2Q9BYV9 841 aa14.65□□□□□ -0.06
DDX39B-219ENST00000481456 CARMIL2Q6F5E8 1435 aa14.65□□□□□ -0.06
DDX39B-219ENST00000481456 CENPJQ9HC77 1338 aaPredicted RBP14.65□□□□□ -0.06
DDX39B-219ENST00000481456 GBP4Q96PP9 640 aa14.65□□□□□ -0.06
DDX39B-219ENST00000481456 MORC1Q86VD1 984 aa14.64□□□□□ -0.07
DDX39B-219ENST00000481456 PNISRQ8TF01 805 aaKnown RBP14.64□□□□□ -0.07
DDX39B-219ENST00000481456 PTMAP06454 111 aaKnown RBP14.64□□□□□ -0.07
DDX39B-219ENST00000481456 AQRO60306 1485 aaKnown RBP eCLIP14.64□□□□□ -0.071e-7■■■■□ 24.6
DDX39B-219ENST00000481456 HMGXB3Q12766 1538 aa14.64□□□□□ -0.07
DDX39B-219ENST00000481456 CCDC144AA2RUR9 1427 aa14.64□□□□□ -0.07
DDX39B-219ENST00000481456 SUPT6HQ7KZ85 1726 aaKnown RBP14.64□□□□□ -0.07
DDX39B-219ENST00000481456 MSNP26038 577 aaKnown RBP14.63□□□□□ -0.07
DDX39B-219ENST00000481456 ANO8Q9HCE9 1232 aaPredicted RBP14.63□□□□□ -0.07
DDX39B-219ENST00000481456 CCDC146Q8IYE0 955 aa14.63□□□□□ -0.07
DDX39B-219ENST00000481456 EIF3AQ14152 1382 aaKnown RBP14.63□□□□□ -0.07
DDX39B-219ENST00000481456 GAPVD1Q14C86 1478 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms