RNA–Protein interactions for RNA: ENST00000481020.5

NR1H3-220, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 1,704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-220ENST00000481020 IFT140Q96RY7 1462 aa19.57■□□□□ 0.72
NR1H3-220ENST00000481020 SPATA31E1Q6ZUB1 1445 aa19.56■□□□□ 0.72
NR1H3-220ENST00000481020 MPHOSPH9Q99550 1183 aa19.56■□□□□ 0.72
NR1H3-220ENST00000481020 SMG6Q86US8 1419 aaKnown RBP19.56■□□□□ 0.72
NR1H3-220ENST00000481020 MAGI3Q5TCQ9 1506 aa19.55■□□□□ 0.72
NR1H3-220ENST00000481020 ARID4BQ4LE39 1312 aaPredicted RBP19.55■□□□□ 0.72
NR1H3-220ENST00000481020 TEX14Q8IWB6 1497 aa19.54■□□□□ 0.72
NR1H3-220ENST00000481020 ANKRD30BQ9BXX2 1392 aa19.53■□□□□ 0.72
NR1H3-220ENST00000481020 EPRSP07814 1512 aaKnown RBP19.52■□□□□ 0.72
NR1H3-220ENST00000481020 MRS2Q9HD23 443 aa19.52■□□□□ 0.72
NR1H3-220ENST00000481020 L3MBTL2Q969R5 705 aa19.51■□□□□ 0.71
NR1H3-220ENST00000481020 RNF123Q5XPI4 1314 aa19.51■□□□□ 0.71
NR1H3-220ENST00000481020 RRP7BPQ9NSQ0 103 aa19.48■□□□□ 0.71
NR1H3-220ENST00000481020 DNMT1P26358 1616 aaKnown RBP19.47■□□□□ 0.71
NR1H3-220ENST00000481020 KDM6BO15054 1643 aa19.46■□□□□ 0.71
NR1H3-220ENST00000481020 IRX6P78412 446 aaPredicted RBP19.46■□□□□ 0.71
NR1H3-220ENST00000481020 DAPK1P53355 1430 aa19.45■□□□□ 0.7
NR1H3-220ENST00000481020 IQGAP2Q13576 1575 aa19.45■□□□□ 0.7
NR1H3-220ENST00000481020 ZNF608Q9ULD9 1512 aaPredicted RBP19.44■□□□□ 0.7
NR1H3-220ENST00000481020 KIF7Q2M1P5 1343 aa19.44■□□□□ 0.7
NR1H3-220ENST00000481020 ROCK2O75116 1388 aaKnown RBP19.44■□□□□ 0.7
NR1H3-220ENST00000481020 NOP58Q9Y2X3 529 aaKnown RBP19.43■□□□□ 0.7
NR1H3-220ENST00000481020 CCDC184Q52MB2 194 aa19.42■□□□□ 0.7
NR1H3-220ENST00000481020 FAM9BQ8IZU0 186 aa19.42■□□□□ 0.7
NR1H3-220ENST00000481020 NUDCQ9Y266 331 aa19.42■□□□□ 0.7
NR1H3-220ENST00000481020 KTN1Q86UP2 1357 aaKnown RBP19.42■□□□□ 0.7
NR1H3-220ENST00000481020 PBRM1Q86U86 1689 aa19.42■□□□□ 0.7
NR1H3-220ENST00000481020 MBD5Q9P267 1494 aa19.41■□□□□ 0.7
NR1H3-220ENST00000481020 C11orf95C9JLR9 678 aaPredicted RBP19.41■□□□□ 0.7
NR1H3-220ENST00000481020 B4GALNT3Q6L9W6 998 aa19.39■□□□□ 0.69
NR1H3-220ENST00000481020 DHX29Q7Z478 1369 aaKnown RBP19.38■□□□□ 0.69
NR1H3-220ENST00000481020 CHIC2Q9UKJ5 165 aa19.37■□□□□ 0.69
NR1H3-220ENST00000481020 ABCC5O15440 1437 aa19.37■□□□□ 0.69
NR1H3-220ENST00000481020 NBPF8Q3BBV2 869 aa19.37■□□□□ 0.69
NR1H3-220ENST00000481020 EIF4G3O43432 1585 aaKnown RBP19.36■□□□□ 0.69
NR1H3-220ENST00000481020 KIF14Q15058 1648 aa19.35■□□□□ 0.69
NR1H3-220ENST00000481020 ANP32AP39687 249 aaKnown RBP19.35■□□□□ 0.69
NR1H3-220ENST00000481020 ADAMTS12P58397 1594 aa19.34■□□□□ 0.69
NR1H3-220ENST00000481020 DEKP35659 375 aaKnown RBP19.34■□□□□ 0.69
NR1H3-220ENST00000481020 UHRF1BP1Q6BDS2 1440 aa19.32■□□□□ 0.68
NR1H3-220ENST00000481020 ADGRL2O95490 1459 aa19.32■□□□□ 0.68
NR1H3-220ENST00000481020 IPO9Q96P70 1041 aaKnown RBP19.31■□□□□ 0.68
NR1H3-220ENST00000481020 CDK13Q14004 1512 aaKnown RBP19.31■□□□□ 0.68
NR1H3-220ENST00000481020 SLC4A1APQ9BWU0 796 aaKnown RBP19.31■□□□□ 0.68
NR1H3-220ENST00000481020 KIAA1107Q9UPP5 1409 aa19.3■□□□□ 0.68
NR1H3-220ENST00000481020 PZPP20742 1482 aa19.3■□□□□ 0.68
NR1H3-220ENST00000481020 CCDC136Q96JN2 1154 aa19.3■□□□□ 0.68
NR1H3-220ENST00000481020 ADGBQ8N7X0 1667 aa19.3■□□□□ 0.68
NR1H3-220ENST00000481020 ARHGEF12Q9NZN5 1544 aa19.29■□□□□ 0.68
NR1H3-220ENST00000481020 KDM5CP41229 1560 aa19.28■□□□□ 0.68
NR1H3-220ENST00000481020 USP47Q96K76 1375 aa19.28■□□□□ 0.68
NR1H3-220ENST00000481020 ITSN2Q9NZM3 1697 aa19.27■□□□□ 0.68
NR1H3-220ENST00000481020 RALGAPBQ86X10 1494 aa19.27■□□□□ 0.68
NR1H3-220ENST00000481020 LRPPRCP42704 1394 aaKnown RBP19.27■□□□□ 0.67
NR1H3-220ENST00000481020 BRD4O60885 1362 aaPredicted RBP19.26■□□□□ 0.67
NR1H3-220ENST00000481020 INSRP06213 1382 aa19.25■□□□□ 0.67
NR1H3-220ENST00000481020 KIF15Q9NS87 1388 aa19.25■□□□□ 0.67
NR1H3-220ENST00000481020 MAGI1Q96QZ7 1491 aaPredicted RBP19.25■□□□□ 0.67
NR1H3-220ENST00000481020 PNISRQ8TF01 805 aaKnown RBP19.24■□□□□ 0.67
NR1H3-220ENST00000481020 ZMYM4Q5VZL5 1548 aa19.23■□□□□ 0.67
NR1H3-220ENST00000481020 RALBP1Q15311 655 aa19.22■□□□□ 0.67
NR1H3-220ENST00000481020 KIAA0586Q9BVV6 1533 aa19.22■□□□□ 0.67
NR1H3-220ENST00000481020 ZBTB47Q9UFB7 747 aaPredicted RBP19.22■□□□□ 0.67
NR1H3-220ENST00000481020 KIAA0556O60303 1618 aa19.22■□□□□ 0.67
NR1H3-220ENST00000481020 RAPGEF6Q8TEU7 1601 aa19.21■□□□□ 0.67
NR1H3-220ENST00000481020 PDE3BQ13370 1112 aa19.21■□□□□ 0.67
NR1H3-220ENST00000481020 RTL5Q5HYW3 569 aaPredicted RBP19.21■□□□□ 0.67
NR1H3-220ENST00000481020 BCORL1Q5H9F3 1711 aa19.21■□□□□ 0.67
NR1H3-220ENST00000481020 ADCY10Q96PN6 1610 aa19.21■□□□□ 0.67
NR1H3-220ENST00000481020 NUP153P49790 1475 aaKnown RBP19.21■□□□□ 0.67
NR1H3-220ENST00000481020 TCERG1O14776 1098 aaKnown RBP19.2■□□□□ 0.66
NR1H3-220ENST00000481020 FOXD1Q16676 465 aa19.2■□□□□ 0.66
NR1H3-220ENST00000481020 USP35Q9P2H5 1018 aa19.2■□□□□ 0.66
NR1H3-220ENST00000481020 CROCC2H7BZ55 1655 aa19.2■□□□□ 0.66
NR1H3-220ENST00000481020 TROQ12816 1431 aaPredicted RBP19.2■□□□□ 0.66
NR1H3-220ENST00000481020 MS4A1P11836 297 aa19.19■□□□□ 0.66
NR1H3-220ENST00000481020 KDM5DQ9BY66 1539 aa19.19■□□□□ 0.66
NR1H3-220ENST00000481020 CAMSAP2Q08AD1 1489 aa19.19■□□□□ 0.66
NR1H3-220ENST00000481020 SHANK2Q9UPX8 1470 aa19.18■□□□□ 0.66
NR1H3-220ENST00000481020 ANKRD30AQ9BXX3 1397 aa19.18■□□□□ 0.66
NR1H3-220ENST00000481020 SYNJ2O15056 1496 aa19.17■□□□□ 0.66
NR1H3-220ENST00000481020 GRIN2AQ12879 1464 aa19.17■□□□□ 0.66
NR1H3-220ENST00000481020 TMC1Q8TDI8 760 aa19.17■□□□□ 0.66
NR1H3-220ENST00000481020 MYBBP1AQ9BQG0 1328 aaKnown RBP19.17■□□□□ 0.66
NR1H3-220ENST00000481020 DISP1Q96F81 1524 aa19.16■□□□□ 0.66
NR1H3-220ENST00000481020 PAK3O75914 559 aaPredicted RBP19.15■□□□□ 0.66
NR1H3-220ENST00000481020 CHMP7Q8WUX9 453 aaPredicted RBP19.14■□□□□ 0.65
NR1H3-220ENST00000481020 E9PCH4 1651 aa19.13■□□□□ 0.65
NR1H3-220ENST00000481020 RRP1P56182 461 aaKnown RBP19.11■□□□□ 0.65
NR1H3-220ENST00000481020 GPATCH8Q9UKJ3 1502 aaKnown RBP19.11■□□□□ 0.65
NR1H3-220ENST00000481020 WASHC2CQ9Y4E1 1318 aa19.11■□□□□ 0.65
NR1H3-220ENST00000481020 ANKRD50Q9ULJ7 1429 aa19.1■□□□□ 0.65
NR1H3-220ENST00000481020 CFDP1Q9UEE9 299 aaPredicted RBP19.08■□□□□ 0.65
NR1H3-220ENST00000481020 PLEKHH2Q8IVE3 1493 aa19.08■□□□□ 0.64
NR1H3-220ENST00000481020 FBLN2P98095 1184 aa19.07■□□□□ 0.64
NR1H3-220ENST00000481020 PKD2Q13563 968 aa19.07■□□□□ 0.64
NR1H3-220ENST00000481020 NBR1Q14596 966 aa19.07■□□□□ 0.64
NR1H3-220ENST00000481020 CEP170Q5SW79 1584 aa19.07■□□□□ 0.64
NR1H3-220ENST00000481020 ZNF644Q9H582 1327 aaPredicted RBP19.07■□□□□ 0.64
NR1H3-220ENST00000481020 PTPRGP23470 1445 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms