RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 CLASP1Q7Z460 1538 aa24.35■■□□□ 1.49
SH3D21-203ENST00000480549 ERCC6L2Q5T890 1561 aa24.35■■□□□ 1.49
SH3D21-203ENST00000480549 KDM6BO15054 1643 aa24.34■■□□□ 1.49
SH3D21-203ENST00000480549 YTHDC1Q96MU7 727 aaKnown RBP24.33■■□□□ 1.49
SH3D21-203ENST00000480549 CHIC2Q9UKJ5 165 aa24.33■■□□□ 1.48
SH3D21-203ENST00000480549 ABCC5O15440 1437 aa24.32■■□□□ 1.48
SH3D21-203ENST00000480549 ZNF644Q9H582 1327 aaPredicted RBP24.32■■□□□ 1.48
SH3D21-203ENST00000480549 CDC42BPAQ5VT25 1732 aa24.32■■□□□ 1.48
SH3D21-203ENST00000480549 RRP7BPQ9NSQ0 103 aa24.32■■□□□ 1.48
SH3D21-203ENST00000480549 CAMSAP2Q08AD1 1489 aa24.31■■□□□ 1.48
SH3D21-203ENST00000480549 ABCC10Q5T3U5 1492 aa24.31■■□□□ 1.48
SH3D21-203ENST00000480549 SIN3AQ96ST3 1273 aa24.31■■□□□ 1.48
SH3D21-203ENST00000480549 ROCK1Q13464 1354 aa24.29■■□□□ 1.48
SH3D21-203ENST00000480549 PLEKHD1A6NEE1 506 aa24.28■■□□□ 1.48
SH3D21-203ENST00000480549 CROCC2H7BZ55 1655 aa24.26■■□□□ 1.47
SH3D21-203ENST00000480549 ANP32EQ9BTT0 268 aa24.25■■□□□ 1.47
SH3D21-203ENST00000480549 CFDP1Q9UEE9 299 aaPredicted RBP24.25■■□□□ 1.47
SH3D21-203ENST00000480549 ADGBQ8N7X0 1667 aa24.23■■□□□ 1.47
SH3D21-203ENST00000480549 TIMELESSQ9UNS1 1208 aa24.22■■□□□ 1.47
SH3D21-203ENST00000480549 DENND4BO75064 1496 aaPredicted RBP24.22■■□□□ 1.47
SH3D21-203ENST00000480549 ABCC2Q92887 1545 aa24.21■■□□□ 1.47
SH3D21-203ENST00000480549 ADGRL2O95490 1459 aa24.15■■□□□ 1.46
SH3D21-203ENST00000480549 PREX2Q70Z35 1606 aa24.14■■□□□ 1.45
SH3D21-203ENST00000480549 CDC42BPBQ9Y5S2 1711 aa24.14■■□□□ 1.45
SH3D21-203ENST00000480549 ZNF777Q9ULD5 760 aaPredicted RBP24.13■■□□□ 1.45
SH3D21-203ENST00000480549 NCOA1Q15788 1441 aa24.12■■□□□ 1.45
SH3D21-203ENST00000480549 TRIM52Q96A61 297 aa24.09■■□□□ 1.45
SH3D21-203ENST00000480549 UHRF1BP1LA0JNW5 1464 aa24.09■■□□□ 1.45
SH3D21-203ENST00000480549 TTC37Q6PGP7 1564 aa24.09■■□□□ 1.45
SH3D21-203ENST00000480549 SHANK2Q9UPX8 1470 aa24.08■■□□□ 1.45
SH3D21-203ENST00000480549 PPP1R15AO75807 674 aaPredicted RBP24.08■■□□□ 1.45
SH3D21-203ENST00000480549 ZCCHC11Q5TAX3 1644 aaKnown RBP24.08■■□□□ 1.45
SH3D21-203ENST00000480549 SAMD9LQ8IVG5 1584 aa24.07■■□□□ 1.44
SH3D21-203ENST00000480549 ARHGEF5Q12774 1597 aa24.07■■□□□ 1.44
SH3D21-203ENST00000480549 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.06■■□□□ 1.446e-7■■■□□ 17.4
SH3D21-203ENST00000480549 MPHOSPH9Q99550 1183 aa24.06■■□□□ 1.44
SH3D21-203ENST00000480549 KDM5BQ9UGL1 1544 aa24.06■■□□□ 1.44
SH3D21-203ENST00000480549 TONSLQ96HA7 1378 aa24.06■■□□□ 1.44
SH3D21-203ENST00000480549 MBD5Q9P267 1494 aa24.02■■□□□ 1.44
SH3D21-203ENST00000480549 MIER1Q8N108 512 aa24.02■■□□□ 1.44
SH3D21-203ENST00000480549 ANKRD30AQ9BXX3 1397 aa24.01■■□□□ 1.43
SH3D21-203ENST00000480549 MYO5CQ9NQX4 1742 aa24.01■■□□□ 1.43
SH3D21-203ENST00000480549 C9orf84Q5VXU9 1444 aa24.01■■□□□ 1.43
SH3D21-203ENST00000480549 PZPP20742 1482 aa23.98■■□□□ 1.43
SH3D21-203ENST00000480549 ARHGAP5Q13017 1502 aa23.95■■□□□ 1.42
SH3D21-203ENST00000480549 CCDC141Q6ZP82 1450 aa23.95■■□□□ 1.42
SH3D21-203ENST00000480549 ANKRD30BQ9BXX2 1392 aa23.94■■□□□ 1.42
SH3D21-203ENST00000480549 HNRNPMP52272 730 aaKnown RBP eCLIP23.94■■□□□ 1.42
SH3D21-203ENST00000480549 ANKRD50Q9ULJ7 1429 aa23.94■■□□□ 1.42
SH3D21-203ENST00000480549 FOXD1Q16676 465 aa23.93■■□□□ 1.42
SH3D21-203ENST00000480549 SYCP2Q9BX26 1530 aa23.93■■□□□ 1.42
SH3D21-203ENST00000480549 TSPY4P0CV99 314 aa23.89■■□□□ 1.42
SH3D21-203ENST00000480549 TSPY10P0CW01 314 aa23.89■■□□□ 1.42
SH3D21-203ENST00000480549 SLC4A1APQ9BWU0 796 aaKnown RBP23.89■■□□□ 1.42
SH3D21-203ENST00000480549 MAST1Q9Y2H9 1570 aa23.89■■□□□ 1.42
SH3D21-203ENST00000480549 RPRD2Q5VT52 1461 aaKnown RBP23.89■■□□□ 1.41
SH3D21-203ENST00000480549 KDM5DQ9BY66 1539 aa23.86■■□□□ 1.41
SH3D21-203ENST00000480549 KIF15Q9NS87 1388 aa23.86■■□□□ 1.41
SH3D21-203ENST00000480549 RSPH4AQ5TD94 716 aa23.86■■□□□ 1.41
SH3D21-203ENST00000480549 KCNH8Q96L42 1107 aa23.86■■□□□ 1.41
SH3D21-203ENST00000480549 PLCH2O75038 1416 aa23.85■■□□□ 1.41
SH3D21-203ENST00000480549 KIAA1107Q9UPP5 1409 aa23.85■■□□□ 1.41
SH3D21-203ENST00000480549 PLEKHH2Q8IVE3 1493 aa23.84■■□□□ 1.41
SH3D21-203ENST00000480549 TEX14Q8IWB6 1497 aa23.83■■□□□ 1.4
SH3D21-203ENST00000480549 TSHZ2Q9NRE2 1034 aa23.83■■□□□ 1.4
SH3D21-203ENST00000480549 ARHGEF12Q9NZN5 1544 aa23.82■■□□□ 1.4
SH3D21-203ENST00000480549 PLXNC1O60486 1568 aa23.8■■□□□ 1.4
SH3D21-203ENST00000480549 ABCC1P33527 1531 aa23.79■■□□□ 1.4
SH3D21-203ENST00000480549 L3MBTL2Q969R5 705 aa23.79■■□□□ 1.4
SH3D21-203ENST00000480549 WDR7Q9Y4E6 1490 aa23.78■■□□□ 1.4
SH3D21-203ENST00000480549 ARAP3Q8WWN8 1544 aa23.78■■□□□ 1.4
SH3D21-203ENST00000480549 OSCARQ8IYS5 282 aa23.77■■□□□ 1.4
SH3D21-203ENST00000480549 HIRIP3Q9BW71 556 aaPredicted RBP23.76■■□□□ 1.39
SH3D21-203ENST00000480549 NUP155O75694 1391 aa23.76■■□□□ 1.39
SH3D21-203ENST00000480549 PKD2Q13563 968 aa23.74■■□□□ 1.39
SH3D21-203ENST00000480549 ERICH6Q7L0X2 663 aa23.73■■□□□ 1.39
SH3D21-203ENST00000480549 ABCA9Q8IUA7 1624 aa23.73■■□□□ 1.39
SH3D21-203ENST00000480549 UNC13BO14795 1591 aa23.73■■□□□ 1.39
SH3D21-203ENST00000480549 EFCAB2Q5VUJ9 269 aa23.72■■□□□ 1.39
SH3D21-203ENST00000480549 SUPT16HQ9Y5B9 1047 aaKnown RBP23.71■■□□□ 1.39
SH3D21-203ENST00000480549 FAM135AQ9P2D6 1515 aa23.69■■□□□ 1.38
SH3D21-203ENST00000480549 DDX10Q13206 875 aaKnown RBP23.68■■□□□ 1.38
SH3D21-203ENST00000480549 TRAPPC8Q9Y2L5 1435 aa23.67■■□□□ 1.38
SH3D21-203ENST00000480549 DUOX2Q9NRD8 1548 aa23.67■■□□□ 1.38
SH3D21-203ENST00000480549 ASXL2Q76L83 1435 aa23.66■■□□□ 1.38
SH3D21-203ENST00000480549 NBPF8Q3BBV2 869 aa23.64■■□□□ 1.38
SH3D21-203ENST00000480549 IQGAP3Q86VI3 1631 aa23.63■■□□□ 1.37
SH3D21-203ENST00000480549 ERBINQ96RT1 1412 aa23.62■■□□□ 1.37
SH3D21-203ENST00000480549 MAGI2Q86UL8 1455 aa23.61■■□□□ 1.37
SH3D21-203ENST00000480549 HSPA5P11021 654 aaKnown RBP23.6■■□□□ 1.37
SH3D21-203ENST00000480549 ZFYVE16Q7Z3T8 1539 aa23.6■■□□□ 1.37
SH3D21-203ENST00000480549 FANCAO15360 1455 aa23.6■■□□□ 1.37
SH3D21-203ENST00000480549 RTEL1-TNFRSF6BF6WH68 1400 aa23.57■■□□□ 1.36
SH3D21-203ENST00000480549 EIF4G2P78344 907 aaKnown RBP eCLIP23.56■■□□□ 1.364e-9■□□□□ 11.1
SH3D21-203ENST00000480549 INO80Q9ULG1 1556 aaPredicted RBP23.56■■□□□ 1.36
SH3D21-203ENST00000480549 AFAP1Q8N556 730 aa23.52■■□□□ 1.36
SH3D21-203ENST00000480549 SPAG9O60271 1321 aaKnown RBP23.52■■□□□ 1.36
SH3D21-203ENST00000480549 SPATA31E1Q6ZUB1 1445 aa23.52■■□□□ 1.36
SH3D21-203ENST00000480549 ADGRL1O94910 1474 aa23.51■■□□□ 1.35
SH3D21-203ENST00000480549 UHRF1BP1Q6BDS2 1440 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms