RNA–Protein interactions for RNA: ENST00000480321.1

MCF2L-225, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 5,727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-225ENST00000480321 TRHP20396 242 aaPredicted RBP17.37■□□□□ 0.37
MCF2L-225ENST00000480321 CHAF1AQ13111 956 aaPredicted RBP17.37■□□□□ 0.37
MCF2L-225ENST00000480321 CUX2O14529 1486 aa17.37■□□□□ 0.37
MCF2L-225ENST00000480321 MLECQ14165 292 aa17.36■□□□□ 0.37
MCF2L-225ENST00000480321 DCAF11Q8TEB1 546 aa17.36■□□□□ 0.37
MCF2L-225ENST00000480321 MSNP26038 577 aaKnown RBP17.35■□□□□ 0.37
MCF2L-225ENST00000480321 HDGFP51858 240 aaKnown RBP17.35■□□□□ 0.37
MCF2L-225ENST00000480321 PLCB2Q00722 1185 aa17.34■□□□□ 0.37
MCF2L-225ENST00000480321 EIF4G1Q04637 1599 aaKnown RBP17.33■□□□□ 0.36
MCF2L-225ENST00000480321 FGD1P98174 961 aa17.33■□□□□ 0.36
MCF2L-225ENST00000480321 IPO8O15397 1037 aaKnown RBP17.33■□□□□ 0.36
MCF2L-225ENST00000480321 SOX12O15370 315 aa17.32■□□□□ 0.36
MCF2L-225ENST00000480321 GOLGA2Q08379 1002 aa17.32■□□□□ 0.36
MCF2L-225ENST00000480321 SRPK2P78362 688 aaKnown RBP17.31■□□□□ 0.36
MCF2L-225ENST00000480321 FMN1Q68DA7 1419 aa17.31■□□□□ 0.36
MCF2L-225ENST00000480321 GBP4Q96PP9 640 aa17.31■□□□□ 0.36
MCF2L-225ENST00000480321 RCAN3Q9UKA8 241 aa17.31■□□□□ 0.36
MCF2L-225ENST00000480321 KCNJ4P48050 445 aa17.3■□□□□ 0.36
MCF2L-225ENST00000480321 RAB3GAP2Q9H2M9 1393 aa17.3■□□□□ 0.36
MCF2L-225ENST00000480321 CECR2Q9BXF3 1484 aa17.3■□□□□ 0.36
MCF2L-225ENST00000480321 GOLGA6L4A6NEF3 574 aa17.3■□□□□ 0.36
MCF2L-225ENST00000480321 MORC1Q86VD1 984 aa17.3■□□□□ 0.36
MCF2L-225ENST00000480321 CALD1Q05682 793 aaKnown RBP17.29■□□□□ 0.36
MCF2L-225ENST00000480321 RWDD1Q9H446 243 aaPredicted RBP17.28■□□□□ 0.36
MCF2L-225ENST00000480321 ROCK2O75116 1388 aaKnown RBP17.28■□□□□ 0.36
MCF2L-225ENST00000480321 NAP1L2Q9ULW6 460 aaPredicted RBP17.28■□□□□ 0.36
MCF2L-225ENST00000480321 PDE3BQ13370 1112 aa17.28■□□□□ 0.36
MCF2L-225ENST00000480321 SAFB2Q14151 953 aaKnown RBP eCLIP17.27■□□□□ 0.35
MCF2L-225ENST00000480321 CLSTN1O94985 981 aa17.26■□□□□ 0.35
MCF2L-225ENST00000480321 PMFBP1Q8TBY8 1022 aa17.26■□□□□ 0.35
MCF2L-225ENST00000480321 CCDC88BA6NC98 1476 aa17.25■□□□□ 0.35
MCF2L-225ENST00000480321 PHLDB1Q86UU1 1377 aa17.24■□□□□ 0.35
MCF2L-225ENST00000480321 TSHZ2Q9NRE2 1034 aa17.24■□□□□ 0.35
MCF2L-225ENST00000480321 IPO9Q96P70 1041 aaKnown RBP17.23■□□□□ 0.35
MCF2L-225ENST00000480321 EIF3AQ14152 1382 aaKnown RBP17.23■□□□□ 0.35
MCF2L-225ENST00000480321 PKD2Q13563 968 aa17.23■□□□□ 0.35
MCF2L-225ENST00000480321 GGT6Q6P531 493 aa17.23■□□□□ 0.35
MCF2L-225ENST00000480321 SMARCA2P51531 1590 aa17.23■□□□□ 0.35
MCF2L-225ENST00000480321 AMER1Q5JTC6 1135 aaPredicted RBP17.22■□□□□ 0.35
MCF2L-225ENST00000480321 MPHOSPH9Q99550 1183 aa17.22■□□□□ 0.35
MCF2L-225ENST00000480321 ANKRD30AQ9BXX3 1397 aa17.21■□□□□ 0.35
MCF2L-225ENST00000480321 RTF1Q92541 710 aaKnown RBP17.2■□□□□ 0.34
MCF2L-225ENST00000480321 CHMP4AQ9BY43 222 aa17.2■□□□□ 0.34
MCF2L-225ENST00000480321 KANK4Q5T7N3 995 aaPredicted RBP17.2■□□□□ 0.34
MCF2L-225ENST00000480321 SYAP1Q96A49 352 aaPredicted RBP17.2■□□□□ 0.34
MCF2L-225ENST00000480321 CARMIL2Q6F5E8 1435 aa17.2■□□□□ 0.34
MCF2L-225ENST00000480321 STK26Q9P289 416 aa17.2■□□□□ 0.34
MCF2L-225ENST00000480321 ISY1Q9ULR0 285 aaKnown RBP17.19■□□□□ 0.34
MCF2L-225ENST00000480321 HDGFL2Q7Z4V5 671 aaPredicted RBP17.18■□□□□ 0.34
MCF2L-225ENST00000480321 USP35Q9P2H5 1018 aa17.18■□□□□ 0.34
MCF2L-225ENST00000480321 ABCC8Q09428 1581 aa17.18■□□□□ 0.34
MCF2L-225ENST00000480321 MROH2BQ7Z745 1585 aa17.18■□□□□ 0.34
MCF2L-225ENST00000480321 HTATSF1O43719 755 aaKnown RBP17.17■□□□□ 0.34
MCF2L-225ENST00000480321 KIAA2012Q0VF49 1180 aa17.17■□□□□ 0.34
MCF2L-225ENST00000480321 TOP2AP11388 1531 aaKnown RBP17.16■□□□□ 0.34
MCF2L-225ENST00000480321 NLRP13Q86W25 1043 aa17.15■□□□□ 0.34
MCF2L-225ENST00000480321 KIAA1211Q6ZU35 1233 aa17.15■□□□□ 0.34
MCF2L-225ENST00000480321 DRC7Q8IY82 874 aa17.14■□□□□ 0.33
MCF2L-225ENST00000480321 GOLGA6L3A6NEY3 463 aa17.14■□□□□ 0.33
MCF2L-225ENST00000480321 PAK3O75914 559 aaPredicted RBP17.14■□□□□ 0.33
MCF2L-225ENST00000480321 NUP155O75694 1391 aa17.12■□□□□ 0.33
MCF2L-225ENST00000480321 SPRYD3Q8NCJ5 442 aa17.12■□□□□ 0.33
MCF2L-225ENST00000480321 KIF15Q9NS87 1388 aa17.11■□□□□ 0.33
MCF2L-225ENST00000480321 RSPH4AQ5TD94 716 aa17.11■□□□□ 0.33
MCF2L-225ENST00000480321 CSB-PGBD3P0DP91 1061 aa17.1■□□□□ 0.33
MCF2L-225ENST00000480321 ITPRIPQ8IWB1 547 aa17.1■□□□□ 0.33
MCF2L-225ENST00000480321 HDAC5Q9UQL6 1122 aa17.1■□□□□ 0.33
MCF2L-225ENST00000480321 CSPP1Q1MSJ5 1256 aa17.1■□□□□ 0.33
MCF2L-225ENST00000480321 RAPGEF2Q9Y4G8 1499 aa17.09■□□□□ 0.33
MCF2L-225ENST00000480321 U2AF1L5P0DN76 240 aaPredicted RBP17.08■□□□□ 0.32
MCF2L-225ENST00000480321 U2AF1Q01081 240 aaKnown RBP eCLIP17.08■□□□□ 0.32
MCF2L-225ENST00000480321 CCDC18Q5T9S5 1454 aa17.08■□□□□ 0.32
MCF2L-225ENST00000480321 APBB1O00213 710 aa17.07■□□□□ 0.32
MCF2L-225ENST00000480321 ZNF330Q9Y3S2 320 aaPredicted RBP17.07■□□□□ 0.32
MCF2L-225ENST00000480321 FOXD1Q16676 465 aa17.07■□□□□ 0.32
MCF2L-225ENST00000480321 HMMRO75330 724 aa17.07■□□□□ 0.32
MCF2L-225ENST00000480321 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.06■□□□□ 0.32
MCF2L-225ENST00000480321 MYBBP1AQ9BQG0 1328 aaKnown RBP17.06■□□□□ 0.32
MCF2L-225ENST00000480321 CENPJQ9HC77 1338 aaPredicted RBP17.05■□□□□ 0.32
MCF2L-225ENST00000480321 DHX57Q6P158 1386 aaKnown RBP17.05■□□□□ 0.32
MCF2L-225ENST00000480321 L3MBTL2Q969R5 705 aa17.05■□□□□ 0.32
MCF2L-225ENST00000480321 SLKQ9H2G2 1235 aaPredicted RBP17.05■□□□□ 0.32
MCF2L-225ENST00000480321 PDS5BQ9NTI5 1447 aa17.05■□□□□ 0.32
MCF2L-225ENST00000480321 EFCAB2Q5VUJ9 269 aa17.04■□□□□ 0.32
MCF2L-225ENST00000480321 CENPQQ7L2Z9 268 aaPredicted RBP17.04■□□□□ 0.32
MCF2L-225ENST00000480321 TPM4P67936 248 aa17.04■□□□□ 0.32
MCF2L-225ENST00000480321 DDX11L8A8MPP1 907 aa17.04■□□□□ 0.32
MCF2L-225ENST00000480321 LMOD3Q0VAK6 560 aa17.04■□□□□ 0.32
MCF2L-225ENST00000480321 GNL2Q13823 731 aaKnown RBP17.04■□□□□ 0.32
MCF2L-225ENST00000480321 ARID3AQ99856 593 aa17.03■□□□□ 0.32
MCF2L-225ENST00000480321 PHF14O94880 888 aa17.03■□□□□ 0.32
MCF2L-225ENST00000480321 GPATCH3Q96I76 525 aa17.02■□□□□ 0.32
MCF2L-225ENST00000480321 ZBED9Q6R2W3 1325 aa17.02■□□□□ 0.32
MCF2L-225ENST00000480321 SMC4Q9NTJ3 1288 aa17.02■□□□□ 0.32
MCF2L-225ENST00000480321 TERF2IPQ9NYB0 399 aa17.01■□□□□ 0.31
MCF2L-225ENST00000480321 MFAP1P55081 439 aaKnown RBP17.01■□□□□ 0.31
MCF2L-225ENST00000480321 SPAG9O60271 1321 aaKnown RBP17.01■□□□□ 0.31
MCF2L-225ENST00000480321 FANCIQ9NVI1 1328 aa17.01■□□□□ 0.31
MCF2L-225ENST00000480321 PRM3Q9NNZ6 103 aa17.01■□□□□ 0.31
MCF2L-225ENST00000480321 CCDC34Q96HJ3 373 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms