RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 ZNF644Q9H582 1327 aaPredicted RBP9.82□□□□□ -0.84
HERC4-210ENST00000480158 TTC37Q6PGP7 1564 aa9.81□□□□□ -0.84
HERC4-210ENST00000480158 ABCC10Q5T3U5 1492 aa9.81□□□□□ -0.84
HERC4-210ENST00000480158 GPATCH8Q9UKJ3 1502 aaKnown RBP9.8□□□□□ -0.84
HERC4-210ENST00000480158 ZBTB22O15209 634 aa9.8□□□□□ -0.84
HERC4-210ENST00000480158 PCGF6Q9BYE7 350 aa9.8□□□□□ -0.84
HERC4-210ENST00000480158 MYOM3Q5VTT5 1437 aa9.8□□□□□ -0.84
HERC4-210ENST00000480158 TRIM26Q12899 539 aaPredicted RBP9.79□□□□□ -0.84
HERC4-210ENST00000480158 CD109Q6YHK3 1445 aa9.79□□□□□ -0.84
HERC4-210ENST00000480158 FGD6Q6ZV73 1430 aa9.78□□□□□ -0.84
HERC4-210ENST00000480158 ARHGAP5Q13017 1502 aa9.78□□□□□ -0.84
HERC4-210ENST00000480158 EFCAB2Q5VUJ9 269 aa9.77□□□□□ -0.85
HERC4-210ENST00000480158 DIP2BQ9P265 1576 aa9.77□□□□□ -0.85
HERC4-210ENST00000480158 PLCH2O75038 1416 aa9.77□□□□□ -0.85
HERC4-210ENST00000480158 SLC24A1O60721 1099 aa9.76□□□□□ -0.85
HERC4-210ENST00000480158 HNRNPMP52272 730 aaKnown RBP eCLIP9.76□□□□□ -0.85
HERC4-210ENST00000480158 ABCA9Q8IUA7 1624 aa9.76□□□□□ -0.85
HERC4-210ENST00000480158 CDC42BPAQ5VT25 1732 aa9.76□□□□□ -0.85
HERC4-210ENST00000480158 FANCAO15360 1455 aa9.74□□□□□ -0.85
HERC4-210ENST00000480158 TSPOAP1O95153 1857 aa9.74□□□□□ -0.85
HERC4-210ENST00000480158 MYO5CQ9NQX4 1742 aa9.74□□□□□ -0.85
HERC4-210ENST00000480158 RRBP1Q9P2E9 1410 aaKnown RBP9.74□□□□□ -0.85
HERC4-210ENST00000480158 CHIC2Q9UKJ5 165 aa9.74□□□□□ -0.85
HERC4-210ENST00000480158 CDC42BPBQ9Y5S2 1711 aa9.74□□□□□ -0.85
HERC4-210ENST00000480158 MIA2Q96PC5 1412 aa9.74□□□□□ -0.85
HERC4-210ENST00000480158 PTPN23Q9H3S7 1636 aa9.74□□□□□ -0.85
HERC4-210ENST00000480158 ITSN2Q9NZM3 1697 aa9.73□□□□□ -0.85
HERC4-210ENST00000480158 PREX2Q70Z35 1606 aa9.73□□□□□ -0.85
HERC4-210ENST00000480158 CAMSAP2Q08AD1 1489 aa9.73□□□□□ -0.85
HERC4-210ENST00000480158 KIF13AQ9H1H9 1805 aa9.72□□□□□ -0.85
HERC4-210ENST00000480158 GLI2P10070 1586 aa9.72□□□□□ -0.85
HERC4-210ENST00000480158 AFAP1Q8N556 730 aa9.72□□□□□ -0.85
HERC4-210ENST00000480158 MAP3K4Q9Y6R4 1608 aa9.72□□□□□ -0.85
HERC4-210ENST00000480158 MYT1LQ9UL68 1186 aa9.71□□□□□ -0.85
HERC4-210ENST00000480158 SAMD9LQ8IVG5 1584 aa9.71□□□□□ -0.86
HERC4-210ENST00000480158 RAPGEF3O95398 923 aa9.71□□□□□ -0.86
HERC4-210ENST00000480158 AKNAQ7Z591 1439 aa9.7□□□□□ -0.86
HERC4-210ENST00000480158 SCAPERQ9BY12 1400 aa9.7□□□□□ -0.86
HERC4-210ENST00000480158 ADGRL1O94910 1474 aa9.7□□□□□ -0.86
HERC4-210ENST00000480158 SYCP2Q9BX26 1530 aa9.7□□□□□ -0.86
HERC4-210ENST00000480158 ARHGEF12Q9NZN5 1544 aa9.69□□□□□ -0.86
HERC4-210ENST00000480158 TCOF1Q13428 1488 aaKnown RBP9.69□□□□□ -0.86
HERC4-210ENST00000480158 TSPY4P0CV99 314 aa9.68□□□□□ -0.86
HERC4-210ENST00000480158 TSPY10P0CW01 314 aa9.68□□□□□ -0.86
HERC4-210ENST00000480158 PTPRKQ15262 1439 aa9.68□□□□□ -0.86
HERC4-210ENST00000480158 TRAPPC8Q9Y2L5 1435 aa9.68□□□□□ -0.86
HERC4-210ENST00000480158 RRP7BPQ9NSQ0 103 aa9.68□□□□□ -0.86
HERC4-210ENST00000480158 ABCC5O15440 1437 aa9.67□□□□□ -0.86
HERC4-210ENST00000480158 DAPK1P53355 1430 aa9.67□□□□□ -0.86
HERC4-210ENST00000480158 MBD5Q9P267 1494 aa9.67□□□□□ -0.86
HERC4-210ENST00000480158 ARAP3Q8WWN8 1544 aa9.67□□□□□ -0.86
HERC4-210ENST00000480158 TEX14Q8IWB6 1497 aa9.67□□□□□ -0.86
HERC4-210ENST00000480158 PPRC1Q5VV67 1664 aaKnown RBP9.67□□□□□ -0.86
HERC4-210ENST00000480158 CNKSR2Q8WXI2 1034 aa9.66□□□□□ -0.86
HERC4-210ENST00000480158 ABCC1P33527 1531 aa9.66□□□□□ -0.86
HERC4-210ENST00000480158 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.66□□□□□ -0.86
HERC4-210ENST00000480158 NEO1Q92859 1461 aa9.66□□□□□ -0.86
HERC4-210ENST00000480158 PLEKHH2Q8IVE3 1493 aa9.65□□□□□ -0.86
HERC4-210ENST00000480158 KIAA1107Q9UPP5 1409 aa9.65□□□□□ -0.86
HERC4-210ENST00000480158 SPAG9O60271 1321 aaKnown RBP9.65□□□□□ -0.86
HERC4-210ENST00000480158 CCDC141Q6ZP82 1450 aa9.64□□□□□ -0.87
HERC4-210ENST00000480158 COL17A1Q9UMD9 1497 aaPredicted RBP9.64□□□□□ -0.87
HERC4-210ENST00000480158 RSPH4AQ5TD94 716 aa9.64□□□□□ -0.87
HERC4-210ENST00000480158 DNMT1P26358 1616 aaKnown RBP9.64□□□□□ -0.87
HERC4-210ENST00000480158 DENND4BO75064 1496 aaPredicted RBP9.64□□□□□ -0.87
HERC4-210ENST00000480158 C9orf84Q5VXU9 1444 aa9.63□□□□□ -0.87
HERC4-210ENST00000480158 CFAP74Q9C0B2 1584 aa9.63□□□□□ -0.87
HERC4-210ENST00000480158 POGZQ7Z3K3 1410 aa9.62□□□□□ -0.87
HERC4-210ENST00000480158 ZNF518AQ6AHZ1 1483 aa9.61□□□□□ -0.87
HERC4-210ENST00000480158 RTN4Q9NQC3 1192 aaKnown RBP9.61□□□□□ -0.87
HERC4-210ENST00000480158 ARHGEF5Q12774 1597 aa9.61□□□□□ -0.87
HERC4-210ENST00000480158 AMER1Q5JTC6 1135 aaPredicted RBP9.6□□□□□ -0.87
HERC4-210ENST00000480158 ANKRD30AQ9BXX3 1397 aa9.6□□□□□ -0.87
HERC4-210ENST00000480158 NCOA1Q15788 1441 aa9.6□□□□□ -0.87
HERC4-210ENST00000480158 KIF15Q9NS87 1388 aa9.59□□□□□ -0.87
HERC4-210ENST00000480158 CROCC2H7BZ55 1655 aa9.58□□□□□ -0.88
HERC4-210ENST00000480158 FOXD4L1Q9NU39 408 aa9.58□□□□□ -0.88
HERC4-210ENST00000480158 YEATS2Q9ULM3 1422 aa9.58□□□□□ -0.88
HERC4-210ENST00000480158 NAIPQ13075 1403 aa9.57□□□□□ -0.88
HERC4-210ENST00000480158 FRMPD1Q5SYB0 1578 aa9.57□□□□□ -0.88
HERC4-210ENST00000480158 SHANK2Q9UPX8 1470 aa9.57□□□□□ -0.88
HERC4-210ENST00000480158 KDM6BO15054 1643 aa9.57□□□□□ -0.88
HERC4-210ENST00000480158 RAB3GAP2Q9H2M9 1393 aa9.57□□□□□ -0.88
HERC4-210ENST00000480158 ATP7AQ04656 1500 aa9.57□□□□□ -0.88
HERC4-210ENST00000480158 SETD5Q9C0A6 1442 aa9.57□□□□□ -0.88
HERC4-210ENST00000480158 RICTORQ6R327 1708 aa9.57□□□□□ -0.88
HERC4-210ENST00000480158 ROCK1Q13464 1354 aa9.57□□□□□ -0.88
HERC4-210ENST00000480158 ZFYVE16Q7Z3T8 1539 aa9.57□□□□□ -0.88
HERC4-210ENST00000480158 HFM1A2PYH4 1435 aa9.56□□□□□ -0.88
HERC4-210ENST00000480158 TRIM52Q96A61 297 aa9.56□□□□□ -0.88
HERC4-210ENST00000480158 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.56□□□□□ -0.88
HERC4-210ENST00000480158 KDM5CP41229 1560 aa9.56□□□□□ -0.88
HERC4-210ENST00000480158 RTEL1-TNFRSF6BF6WH68 1400 aa9.55□□□□□ -0.88
HERC4-210ENST00000480158 ADGRL2O95490 1459 aa9.55□□□□□ -0.88
HERC4-210ENST00000480158 MLH3Q9UHC1 1453 aa9.55□□□□□ -0.88
HERC4-210ENST00000480158 SCAF1Q9H7N4 1312 aaKnown RBP9.55□□□□□ -0.88
HERC4-210ENST00000480158 HECW2Q9P2P5 1572 aa9.55□□□□□ -0.88
HERC4-210ENST00000480158 ANKRD50Q9ULJ7 1429 aa9.55□□□□□ -0.88
HERC4-210ENST00000480158 KIDINS220Q9ULH0 1771 aa9.54□□□□□ -0.88
HERC4-210ENST00000480158 KIF3BO15066 747 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms