RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 CAMSAP2Q08AD1 1489 aa16.34■□□□□ 0.21
VTI1A-204ENST00000480057 GCC2Q8IWJ2 1684 aa16.34■□□□□ 0.21
VTI1A-204ENST00000480057 CFDP1Q9UEE9 299 aaPredicted RBP16.33■□□□□ 0.2
VTI1A-204ENST00000480057 ROCK1Q13464 1354 aa16.33■□□□□ 0.2
VTI1A-204ENST00000480057 PREX2Q70Z35 1606 aa16.33■□□□□ 0.2
VTI1A-204ENST00000480057 DAPK1P53355 1430 aa16.32■□□□□ 0.2
VTI1A-204ENST00000480057 ABCC5O15440 1437 aa16.3■□□□□ 0.2
VTI1A-204ENST00000480057 NAIPQ13075 1403 aa16.3■□□□□ 0.2
VTI1A-204ENST00000480057 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.29■□□□□ 0.2
VTI1A-204ENST00000480057 CROCC2H7BZ55 1655 aa16.28■□□□□ 0.2
VTI1A-204ENST00000480057 ARHGEF5Q12774 1597 aa16.27■□□□□ 0.2
VTI1A-204ENST00000480057 MYO5CQ9NQX4 1742 aa16.27■□□□□ 0.19
VTI1A-204ENST00000480057 SHANK2Q9UPX8 1470 aa16.27■□□□□ 0.19
VTI1A-204ENST00000480057 ADGBQ8N7X0 1667 aa16.27■□□□□ 0.19
VTI1A-204ENST00000480057 CDC42BPBQ9Y5S2 1711 aa16.26■□□□□ 0.19
VTI1A-204ENST00000480057 ADGRL2O95490 1459 aa16.26■□□□□ 0.19
VTI1A-204ENST00000480057 TTC37Q6PGP7 1564 aa16.26■□□□□ 0.19
VTI1A-204ENST00000480057 ARAP3Q8WWN8 1544 aa16.25■□□□□ 0.19
VTI1A-204ENST00000480057 PLEKHH2Q8IVE3 1493 aa16.24■□□□□ 0.19
VTI1A-204ENST00000480057 WDR7Q9Y4E6 1490 aa16.24■□□□□ 0.19
VTI1A-204ENST00000480057 ZNF644Q9H582 1327 aaPredicted RBP16.23■□□□□ 0.19
VTI1A-204ENST00000480057 RSPH4AQ5TD94 716 aa16.23■□□□□ 0.19
VTI1A-204ENST00000480057 SAMD9LQ8IVG5 1584 aa16.21■□□□□ 0.19
VTI1A-204ENST00000480057 PLCH2O75038 1416 aa16.21■□□□□ 0.19
VTI1A-204ENST00000480057 KIAA1107Q9UPP5 1409 aa16.21■□□□□ 0.19
VTI1A-204ENST00000480057 MAPKBP1O60336 1514 aa16.21■□□□□ 0.19
VTI1A-204ENST00000480057 ARHGAP5Q13017 1502 aa16.19■□□□□ 0.18
VTI1A-204ENST00000480057 MBD5Q9P267 1494 aa16.19■□□□□ 0.18
VTI1A-204ENST00000480057 CCDC141Q6ZP82 1450 aa16.18■□□□□ 0.18
VTI1A-204ENST00000480057 ABCA9Q8IUA7 1624 aa16.18■□□□□ 0.18
VTI1A-204ENST00000480057 NCOA1Q15788 1441 aa16.18■□□□□ 0.18
VTI1A-204ENST00000480057 MAST1Q9Y2H9 1570 aa16.17■□□□□ 0.18
VTI1A-204ENST00000480057 ANKRD30AQ9BXX3 1397 aa16.17■□□□□ 0.18
VTI1A-204ENST00000480057 ZNF777Q9ULD5 760 aaPredicted RBP16.17■□□□□ 0.18
VTI1A-204ENST00000480057 NPM1P06748 294 aaKnown RBP eCLIP16.16■□□□□ 0.18
VTI1A-204ENST00000480057 RRP7BPQ9NSQ0 103 aa16.16■□□□□ 0.18
VTI1A-204ENST00000480057 CHIC2Q9UKJ5 165 aa16.16■□□□□ 0.18
VTI1A-204ENST00000480057 ASXL2Q76L83 1435 aa16.16■□□□□ 0.18
VTI1A-204ENST00000480057 C9orf84Q5VXU9 1444 aa16.15■□□□□ 0.18
VTI1A-204ENST00000480057 TSPY4P0CV99 314 aa16.13■□□□□ 0.17
VTI1A-204ENST00000480057 TSPY10P0CW01 314 aa16.13■□□□□ 0.17
VTI1A-204ENST00000480057 EFCAB2Q5VUJ9 269 aa16.13■□□□□ 0.17
VTI1A-204ENST00000480057 KCNH8Q96L42 1107 aa16.13■□□□□ 0.17
VTI1A-204ENST00000480057 TIMELESSQ9UNS1 1208 aa16.13■□□□□ 0.17
VTI1A-204ENST00000480057 ABCC1P33527 1531 aa16.12■□□□□ 0.17
VTI1A-204ENST00000480057 SYCP2Q9BX26 1530 aa16.12■□□□□ 0.17
VTI1A-204ENST00000480057 KDM6BO15054 1643 aa16.12■□□□□ 0.17
VTI1A-204ENST00000480057 RIMBP3CA6NJZ7 1639 aa16.11■□□□□ 0.17
VTI1A-204ENST00000480057 RIMBP3BA6NNM3 1639 aa16.11■□□□□ 0.17
VTI1A-204ENST00000480057 RIMBP3Q9UFD9 1639 aa16.11■□□□□ 0.17
VTI1A-204ENST00000480057 PLXNC1O60486 1568 aa16.09■□□□□ 0.17
VTI1A-204ENST00000480057 HNRNPMP52272 730 aaKnown RBP eCLIP16.08■□□□□ 0.16
VTI1A-204ENST00000480057 ANKRD50Q9ULJ7 1429 aa16.07■□□□□ 0.16
VTI1A-204ENST00000480057 CFAP74Q9C0B2 1584 aa16.06■□□□□ 0.16
VTI1A-204ENST00000480057 ARHGEF12Q9NZN5 1544 aa16.05■□□□□ 0.16
VTI1A-204ENST00000480057 KDM5DQ9BY66 1539 aa16.04■□□□□ 0.16
VTI1A-204ENST00000480057 FANCAO15360 1455 aa16.04■□□□□ 0.16
VTI1A-204ENST00000480057 KIF15Q9NS87 1388 aa16.04■□□□□ 0.16
VTI1A-204ENST00000480057 RTEL1-TNFRSF6BF6WH68 1400 aa16.03■□□□□ 0.16
VTI1A-204ENST00000480057 TRIM52Q96A61 297 aa16.03■□□□□ 0.16
VTI1A-204ENST00000480057 DENND4BO75064 1496 aaPredicted RBP16.03■□□□□ 0.16
VTI1A-204ENST00000480057 MPHOSPH9Q99550 1183 aa16.02■□□□□ 0.16
VTI1A-204ENST00000480057 DUOX2Q9NRD8 1548 aa16.01■□□□□ 0.15
VTI1A-204ENST00000480057 GLI2P10070 1586 aa16■□□□□ 0.15
VTI1A-204ENST00000480057 PZPP20742 1482 aa15.99■□□□□ 0.15
VTI1A-204ENST00000480057 CD109Q6YHK3 1445 aa15.98■□□□□ 0.15
VTI1A-204ENST00000480057 POTEDQ86YR6 584 aa15.98■□□□□ 0.15
VTI1A-204ENST00000480057 ERBINQ96RT1 1412 aa15.98■□□□□ 0.15
VTI1A-204ENST00000480057 TRAPPC8Q9Y2L5 1435 aa15.98■□□□□ 0.15
VTI1A-204ENST00000480057 ADGRL1O94910 1474 aa15.97■□□□□ 0.15
VTI1A-204ENST00000480057 UNC13BO14795 1591 aa15.97■□□□□ 0.15
VTI1A-204ENST00000480057 ZFYVE16Q7Z3T8 1539 aa15.96■□□□□ 0.15
VTI1A-204ENST00000480057 NEO1Q92859 1461 aa15.96■□□□□ 0.14
VTI1A-204ENST00000480057 INO80Q9ULG1 1556 aaPredicted RBP15.96■□□□□ 0.14
VTI1A-204ENST00000480057 CYB5RLQ6IPT4 315 aa15.95■□□□□ 0.14
VTI1A-204ENST00000480057 SIN3AQ96ST3 1273 aa15.95■□□□□ 0.14
VTI1A-204ENST00000480057 MAP3K4Q9Y6R4 1608 aa15.94■□□□□ 0.14
VTI1A-204ENST00000480057 ZNF316A6NFI3 1004 aaPredicted RBP15.94■□□□□ 0.14
VTI1A-204ENST00000480057 SLC4A1APQ9BWU0 796 aaKnown RBP15.94■□□□□ 0.14
VTI1A-204ENST00000480057 ANKRD30BQ9BXX2 1392 aa15.94■□□□□ 0.14
VTI1A-204ENST00000480057 SCAPERQ9BY12 1400 aa15.94■□□□□ 0.14
VTI1A-204ENST00000480057 SPAG9O60271 1321 aaKnown RBP15.94■□□□□ 0.14
VTI1A-204ENST00000480057 MAGI2Q86UL8 1455 aa15.93■□□□□ 0.14
VTI1A-204ENST00000480057 ATP7AQ04656 1500 aa15.93■□□□□ 0.14
VTI1A-204ENST00000480057 ZNF518AQ6AHZ1 1483 aa15.92■□□□□ 0.14
VTI1A-204ENST00000480057 TONSLQ96HA7 1378 aa15.92■□□□□ 0.14
VTI1A-204ENST00000480057 NEUROD1Q13562 356 aa15.91■□□□□ 0.14
VTI1A-204ENST00000480057 RPRD2Q5VT52 1461 aaKnown RBP15.91■□□□□ 0.14
VTI1A-204ENST00000480057 NUP155O75694 1391 aa15.9■□□□□ 0.14
VTI1A-204ENST00000480057 KDM5CP41229 1560 aa15.9■□□□□ 0.14
VTI1A-204ENST00000480057 IQGAP3Q86VI3 1631 aa15.9■□□□□ 0.14
VTI1A-204ENST00000480057 EIF2AK4Q9P2K8 1649 aaKnown RBP15.89■□□□□ 0.13
VTI1A-204ENST00000480057 POGZQ7Z3K3 1410 aa15.88■□□□□ 0.13
VTI1A-204ENST00000480057 PPP1R15AO75807 674 aaPredicted RBP15.88■□□□□ 0.13
VTI1A-204ENST00000480057 FAM135AQ9P2D6 1515 aa15.88■□□□□ 0.13
VTI1A-204ENST00000480057 DIP2BQ9P265 1576 aa15.87■□□□□ 0.13
VTI1A-204ENST00000480057 MLH3Q9UHC1 1453 aa15.87■□□□□ 0.13
VTI1A-204ENST00000480057 AFAP1Q8N556 730 aa15.87■□□□□ 0.13
VTI1A-204ENST00000480057 DEPDC5O75140 1603 aa15.86■□□□□ 0.13
VTI1A-204ENST00000480057 KIDINS220Q9ULH0 1771 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms