RNA–Protein interactions for RNA: ENST00000480032.4

SCN2A-205, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 1 (best)

Gene SCN2A, Length 11,676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-205ENST00000480032 CCDC9Q9Y3X0 531 aaKnown RBP5.35□□□□□ -1.55
SCN2A-205ENST00000480032 NUTM1Q86Y26 1132 aa5.35□□□□□ -1.55
SCN2A-205ENST00000480032 KIF16BQ96L93 1317 aa5.35□□□□□ -1.55
SCN2A-205ENST00000480032 KNSTRNQ9Y448 316 aa5.34□□□□□ -1.55
SCN2A-205ENST00000480032 LETM1O95202 739 aaPredicted RBP5.34□□□□□ -1.55
SCN2A-205ENST00000480032 SLC4A1APQ9BWU0 796 aaKnown RBP5.34□□□□□ -1.55
SCN2A-205ENST00000480032 C14orf37Q86TY3 774 aa5.34□□□□□ -1.55
SCN2A-205ENST00000480032 DNAJC2Q99543 621 aaKnown RBP5.34□□□□□ -1.55
SCN2A-205ENST00000480032 PHF14O94880 888 aa5.34□□□□□ -1.55
SCN2A-205ENST00000480032 TUBB4AP04350 444 aa5.34□□□□□ -1.56
SCN2A-205ENST00000480032 CCDC144AA2RUR9 1427 aa5.34□□□□□ -1.56
SCN2A-205ENST00000480032 MRE11P49959 708 aa5.33□□□□□ -1.56
SCN2A-205ENST00000480032 TEX35Q5T0J7 233 aa5.33□□□□□ -1.56
SCN2A-205ENST00000480032 PAIP2Q9BPZ3 127 aaKnown RBP5.33□□□□□ -1.56
SCN2A-205ENST00000480032 GOLGA3Q08378 1498 aa5.33□□□□□ -1.56
SCN2A-205ENST00000480032 AEBP1Q8IUX7 1158 aa5.33□□□□□ -1.56
SCN2A-205ENST00000480032 DIAPH3Q9NSV4 1193 aa5.33□□□□□ -1.56
SCN2A-205ENST00000480032 MCCP23508 829 aa5.32□□□□□ -1.56
SCN2A-205ENST00000480032 ROCK2O75116 1388 aaKnown RBP5.32□□□□□ -1.56
SCN2A-205ENST00000480032 U2SURPO15042 1029 aaKnown RBP5.32□□□□□ -1.56
SCN2A-205ENST00000480032 ATAD2Q6PL18 1390 aa5.32□□□□□ -1.56
SCN2A-205ENST00000480032 CASC1Q6TDU7 716 aa5.32□□□□□ -1.56
SCN2A-205ENST00000480032 EIF3AQ14152 1382 aaKnown RBP5.32□□□□□ -1.56
SCN2A-205ENST00000480032 SETSIPP0DME0 302 aa5.32□□□□□ -1.56
SCN2A-205ENST00000480032 CALCOCO1Q9P1Z2 691 aa5.32□□□□□ -1.56
SCN2A-205ENST00000480032 GTPBP4Q9BZE4 634 aaKnown RBP5.32□□□□□ -1.56
SCN2A-205ENST00000480032 CHMP4CQ96CF2 233 aa5.31□□□□□ -1.56
SCN2A-205ENST00000480032 TUBB4BP68371 445 aa5.31□□□□□ -1.56
SCN2A-205ENST00000480032 PLEKHG5O94827 1062 aa5.31□□□□□ -1.56
SCN2A-205ENST00000480032 RPAINQ86UA6 219 aa5.31□□□□□ -1.56
SCN2A-205ENST00000480032 TMX4Q9H1E5 349 aaPredicted RBP5.31□□□□□ -1.56
SCN2A-205ENST00000480032 KIF2AO00139 706 aaPredicted RBP5.3□□□□□ -1.56
SCN2A-205ENST00000480032 NPM1P06748 294 aaKnown RBP eCLIP5.3□□□□□ -1.56
SCN2A-205ENST00000480032 MAPK8IP3Q9UPT6 1336 aa5.3□□□□□ -1.56
SCN2A-205ENST00000480032 CLCN1P35523 988 aa5.3□□□□□ -1.56
SCN2A-205ENST00000480032 FAM184AQ8NB25 1140 aa5.3□□□□□ -1.56
SCN2A-205ENST00000480032 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.3□□□□□ -1.56
SCN2A-205ENST00000480032 HNRNPUL2Q1KMD3 747 aaKnown RBP5.3□□□□□ -1.56
SCN2A-205ENST00000480032 POLR3GO15318 223 aaPredicted RBP5.3□□□□□ -1.56
SCN2A-205ENST00000480032 SRPK2P78362 688 aaKnown RBP5.3□□□□□ -1.56
SCN2A-205ENST00000480032 CHMP3Q9Y3E7 222 aa5.29□□□□□ -1.56
SCN2A-205ENST00000480032 CLIP1P30622 1438 aa5.29□□□□□ -1.56
SCN2A-205ENST00000480032 RNF20Q5VTR2 975 aa5.29□□□□□ -1.56
SCN2A-205ENST00000480032 SARNPP82979 210 aaKnown RBP5.29□□□□□ -1.56
SCN2A-205ENST00000480032 SMAP1Q8IYB5 467 aaPredicted RBP5.29□□□□□ -1.56
SCN2A-205ENST00000480032 CAGE1Q8TC20 777 aa5.29□□□□□ -1.56
SCN2A-205ENST00000480032 A6NNZ2 444 aa5.29□□□□□ -1.56
SCN2A-205ENST00000480032 TUBB8Q3ZCM7 444 aa5.29□□□□□ -1.56
SCN2A-205ENST00000480032 ARGLU1Q9NWB6 273 aaPredicted RBP5.29□□□□□ -1.56
SCN2A-205ENST00000480032 ACBD3Q9H3P7 528 aa5.28□□□□□ -1.56
SCN2A-205ENST00000480032 PLCD4Q9BRC7 762 aa5.28□□□□□ -1.56
SCN2A-205ENST00000480032 TONSLQ96HA7 1378 aa5.28□□□□□ -1.56
SCN2A-205ENST00000480032 AKNAQ7Z591 1439 aa5.28□□□□□ -1.56
SCN2A-205ENST00000480032 UTP14CQ5TAP6 766 aaKnown RBP5.28□□□□□ -1.56
SCN2A-205ENST00000480032 ZMYM3Q14202 1370 aa5.28□□□□□ -1.56
SCN2A-205ENST00000480032 CEP164Q9UPV0 1460 aa5.28□□□□□ -1.56
SCN2A-205ENST00000480032 RBM26Q5T8P6 1007 aaKnown RBP5.27□□□□□ -1.57
SCN2A-205ENST00000480032 DYNC1I1O14576 645 aa5.27□□□□□ -1.57
SCN2A-205ENST00000480032 BAZ1BQ9UIG0 1483 aaKnown RBP5.27□□□□□ -1.57
SCN2A-205ENST00000480032 GOLGA6L4A6NEF3 574 aa5.27□□□□□ -1.57
SCN2A-205ENST00000480032 DEF6Q9H4E7 631 aa5.27□□□□□ -1.57
SCN2A-205ENST00000480032 ATP6V1DQ9Y5K8 247 aa5.27□□□□□ -1.57
SCN2A-205ENST00000480032 TUBBP07437 444 aa5.27□□□□□ -1.57
SCN2A-205ENST00000480032 HMMRO75330 724 aa5.27□□□□□ -1.57
SCN2A-205ENST00000480032 CAVIN2O95810 425 aa5.26□□□□□ -1.57
SCN2A-205ENST00000480032 CIZ1Q9ULV3 898 aaPredicted RBP5.26□□□□□ -1.57
SCN2A-205ENST00000480032 PRIMPOLQ96LW4 560 aa5.26□□□□□ -1.57
SCN2A-205ENST00000480032 UBTFP17480 764 aaKnown RBP5.26□□□□□ -1.57
SCN2A-205ENST00000480032 DHX29Q7Z478 1369 aaKnown RBP5.26□□□□□ -1.57
SCN2A-205ENST00000480032 HNRNPUQ00839 825 aaKnown RBP eCLIP5.26□□□□□ -1.57
SCN2A-205ENST00000480032 TNIKQ9UKE5 1360 aa5.26□□□□□ -1.57
SCN2A-205ENST00000480032 FEZ1Q99689 392 aa5.26□□□□□ -1.57
SCN2A-205ENST00000480032 BCL11BQ9C0K0 894 aaPredicted RBP5.25□□□□□ -1.57
SCN2A-205ENST00000480032 ZBED9Q6R2W3 1325 aa5.25□□□□□ -1.57
SCN2A-205ENST00000480032 NUCB2P80303 420 aa5.25□□□□□ -1.57
SCN2A-205ENST00000480032 FHAD1B1AJZ9 1412 aa5.25□□□□□ -1.57
SCN2A-205ENST00000480032 MFAP1P55081 439 aaKnown RBP5.25□□□□□ -1.57
SCN2A-205ENST00000480032 ANKRD30AQ9BXX3 1397 aa5.25□□□□□ -1.57
SCN2A-205ENST00000480032 PRPF40AO75400 957 aaKnown RBP5.25□□□□□ -1.57
SCN2A-205ENST00000480032 LIG1P18858 919 aa5.25□□□□□ -1.57
SCN2A-205ENST00000480032 IRX3P78415 501 aaPredicted RBP5.25□□□□□ -1.57
SCN2A-205ENST00000480032 GABPB1Q06547 395 aaPredicted RBP5.25□□□□□ -1.57
SCN2A-205ENST00000480032 V9GYY5 206 aaPredicted RBP5.25□□□□□ -1.57
SCN2A-205ENST00000480032 SLC20A2Q08357 652 aa5.24□□□□□ -1.57
SCN2A-205ENST00000480032 CCP110O43303 1012 aa5.24□□□□□ -1.57
SCN2A-205ENST00000480032 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.24□□□□□ -1.57
SCN2A-205ENST00000480032 TULP1O00294 542 aaPredicted RBP5.24□□□□□ -1.57
SCN2A-205ENST00000480032 FGD1P98174 961 aa5.24□□□□□ -1.57
SCN2A-205ENST00000480032 FAM50AQ14320 339 aaKnown RBP5.24□□□□□ -1.57
SCN2A-205ENST00000480032 CCDC34Q96HJ3 373 aa5.24□□□□□ -1.57
SCN2A-205ENST00000480032 ITGB1BP2Q9UKP3 347 aa5.24□□□□□ -1.57
SCN2A-205ENST00000480032 GOLGA6L10A6NI86 522 aa5.24□□□□□ -1.57
SCN2A-205ENST00000480032 RALBP1Q15311 655 aa5.24□□□□□ -1.57
SCN2A-205ENST00000480032 ZMYND15Q9H091 742 aa5.24□□□□□ -1.57
SCN2A-205ENST00000480032 GBP2P32456 591 aaPredicted RBP5.24□□□□□ -1.57
SCN2A-205ENST00000480032 SF3B2Q13435 895 aaKnown RBP5.24□□□□□ -1.57
SCN2A-205ENST00000480032 RABEP1Q15276 862 aa5.24□□□□□ -1.57
SCN2A-205ENST00000480032 KIF1CO43896 1103 aaKnown RBP5.24□□□□□ -1.57
SCN2A-205ENST00000480032 TPM4P67936 248 aa5.23□□□□□ -1.57
SCN2A-205ENST00000480032 ZSCAN30Q86W11 494 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms