RNA–Protein interactions for RNA: ENST00000480016.1

EFEMP1-211, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

TSL 2

Gene EFEMP1, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-211ENST00000480016 TTC37Q6PGP7 1564 aa14.91□□□□□ -0.02
EFEMP1-211ENST00000480016 FOXD4L1Q9NU39 408 aa14.91□□□□□ -0.02
EFEMP1-211ENST00000480016 ZNF219Q9P2Y4 722 aaPredicted RBP14.91□□□□□ -0.02
EFEMP1-211ENST00000480016 UHRF1BP1Q6BDS2 1440 aa14.91□□□□□ -0.02
EFEMP1-211ENST00000480016 UACAQ9BZF9 1416 aa14.9□□□□□ -0.02
EFEMP1-211ENST00000480016 WDR7Q9Y4E6 1490 aa14.88□□□□□ -0.03
EFEMP1-211ENST00000480016 TNIKQ9UKE5 1360 aa14.87□□□□□ -0.03
EFEMP1-211ENST00000480016 SETD1BQ9UPS6 1966 aaKnown RBP14.86□□□□□ -0.03
EFEMP1-211ENST00000480016 KCNH8Q96L42 1107 aa14.86□□□□□ -0.03
EFEMP1-211ENST00000480016 NCOA1Q15788 1441 aa14.85□□□□□ -0.03
EFEMP1-211ENST00000480016 POGZQ7Z3K3 1410 aa14.85□□□□□ -0.03
EFEMP1-211ENST00000480016 ZCCHC11Q5TAX3 1644 aaKnown RBP14.84□□□□□ -0.03
EFEMP1-211ENST00000480016 MLECQ14165 292 aa14.84□□□□□ -0.03
EFEMP1-211ENST00000480016 ERICH3Q5RHP9 1530 aa14.82□□□□□ -0.04
EFEMP1-211ENST00000480016 RBM33Q96EV2 1170 aaKnown RBP14.81□□□□□ -0.04
EFEMP1-211ENST00000480016 PHLDB1Q86UU1 1377 aa14.81□□□□□ -0.04
EFEMP1-211ENST00000480016 FER1L4A9Z1Z3 1794 aa14.8□□□□□ -0.04
EFEMP1-211ENST00000480016 SIGLEC1Q9BZZ2 1709 aa14.78□□□□□ -0.04
EFEMP1-211ENST00000480016 ALKQ9UM73 1620 aa14.77□□□□□ -0.04
EFEMP1-211ENST00000480016 FRMPD1Q5SYB0 1578 aa14.77□□□□□ -0.04
EFEMP1-211ENST00000480016 FANCAO15360 1455 aa14.76□□□□□ -0.05
EFEMP1-211ENST00000480016 NCKAP5LQ9HCH0 1330 aa14.75□□□□□ -0.05
EFEMP1-211ENST00000480016 ARHGEF40Q8TER5 1519 aa14.75□□□□□ -0.05
EFEMP1-211ENST00000480016 ABCB7O75027 752 aa14.74□□□□□ -0.05
EFEMP1-211ENST00000480016 KIAA0556O60303 1618 aa14.71□□□□□ -0.05
EFEMP1-211ENST00000480016 ZBTB22O15209 634 aa14.71□□□□□ -0.05
EFEMP1-211ENST00000480016 SETBP1Q9Y6X0 1596 aa14.7□□□□□ -0.06
EFEMP1-211ENST00000480016 CARMIL2Q6F5E8 1435 aa14.7□□□□□ -0.06
EFEMP1-211ENST00000480016 ARHGEF12Q9NZN5 1544 aa14.69□□□□□ -0.06
EFEMP1-211ENST00000480016 PTPRKQ15262 1439 aa14.67□□□□□ -0.06
EFEMP1-211ENST00000480016 ZRANB1Q9UGI0 708 aa14.67□□□□□ -0.06
EFEMP1-211ENST00000480016 AKNAQ7Z591 1439 aa14.66□□□□□ -0.06
EFEMP1-211ENST00000480016 WRNQ14191 1432 aaPredicted RBP eCLIP14.65□□□□□ -0.06
EFEMP1-211ENST00000480016 CAMSAP1Q5T5Y3 1602 aa14.64□□□□□ -0.07
EFEMP1-211ENST00000480016 TRIM52Q96A61 297 aa14.64□□□□□ -0.07
EFEMP1-211ENST00000480016 SUPT5HO00267 1087 aaKnown RBP14.62□□□□□ -0.07
EFEMP1-211ENST00000480016 NEO1Q92859 1461 aa14.62□□□□□ -0.07
EFEMP1-211ENST00000480016 PKD2Q13563 968 aa14.59□□□□□ -0.07
EFEMP1-211ENST00000480016 TRAPPC8Q9Y2L5 1435 aa14.58□□□□□ -0.08
EFEMP1-211ENST00000480016 CPS1P31327 1500 aa14.57□□□□□ -0.08
EFEMP1-211ENST00000480016 ATF5Q9Y2D1 282 aaPredicted RBP14.56□□□□□ -0.08
EFEMP1-211ENST00000480016 YY1P25490 414 aa14.55□□□□□ -0.08
EFEMP1-211ENST00000480016 SLC34A2O95436 690 aa14.54□□□□□ -0.08
EFEMP1-211ENST00000480016 POLA2Q14181 598 aa14.54□□□□□ -0.08
EFEMP1-211ENST00000480016 FHOD3Q2V2M9 1422 aa14.53□□□□□ -0.08
EFEMP1-211ENST00000480016 SENP3-EIF4A1A0A087X0R7 540 aa14.53□□□□□ -0.08
EFEMP1-211ENST00000480016 RICTORQ6R327 1708 aa14.52□□□□□ -0.09
EFEMP1-211ENST00000480016 DISP1Q96F81 1524 aa14.51□□□□□ -0.09
EFEMP1-211ENST00000480016 DENND4BO75064 1496 aaPredicted RBP14.51□□□□□ -0.09
EFEMP1-211ENST00000480016 ZFYVE16Q7Z3T8 1539 aa14.51□□□□□ -0.09
EFEMP1-211ENST00000480016 SHANK2Q9UPX8 1470 aa14.5□□□□□ -0.09
EFEMP1-211ENST00000480016 TCOF1Q13428 1488 aaKnown RBP14.5□□□□□ -0.09
EFEMP1-211ENST00000480016 C3P01024 1663 aa14.49□□□□□ -0.09
EFEMP1-211ENST00000480016 LRRC7Q96NW7 1537 aa14.47□□□□□ -0.09
EFEMP1-211ENST00000480016 RAPGEF2Q9Y4G8 1499 aa14.46□□□□□ -0.09
EFEMP1-211ENST00000480016 ABCA9Q8IUA7 1624 aa14.46□□□□□ -0.09
EFEMP1-211ENST00000480016 ATXN8OSP0DMR3 200 aa14.46□□□□□ -0.09
EFEMP1-211ENST00000480016 EFCAB5A4FU69 1503 aa14.46□□□□□ -0.1
EFEMP1-211ENST00000480016 ZMYM4Q5VZL5 1548 aa14.46□□□□□ -0.1
EFEMP1-211ENST00000480016 PLA2R1Q13018 1463 aa14.45□□□□□ -0.1
EFEMP1-211ENST00000480016 MAGI2Q86UL8 1455 aa14.44□□□□□ -0.1
EFEMP1-211ENST00000480016 RXRBP28702 533 aa14.44□□□□□ -0.1
EFEMP1-211ENST00000480016 ZNF772Q68DY9 489 aaPredicted RBP14.41□□□□□ -0.1
EFEMP1-211ENST00000480016 ATP10AO60312 1499 aa14.4□□□□□ -0.1
EFEMP1-211ENST00000480016 CDK12Q9NYV4 1490 aaPredicted RBP14.4□□□□□ -0.1
EFEMP1-211ENST00000480016 PCDH10Q9P2E7 1040 aa14.4□□□□□ -0.1
EFEMP1-211ENST00000480016 LRP5O75197 1615 aa14.39□□□□□ -0.11
EFEMP1-211ENST00000480016 C9orf84Q5VXU9 1444 aa14.35□□□□□ -0.11
EFEMP1-211ENST00000480016 HECW1Q76N89 1606 aa14.34□□□□□ -0.11
EFEMP1-211ENST00000480016 BIVM-ERCC5R4GMW8 1640 aa14.33□□□□□ -0.11
EFEMP1-211ENST00000480016 EHMT2Q96KQ7 1210 aa14.33□□□□□ -0.12
EFEMP1-211ENST00000480016 IQGAP2Q13576 1575 aa14.33□□□□□ -0.12
EFEMP1-211ENST00000480016 VWDEQ8N2E2 1590 aa14.32□□□□□ -0.12
EFEMP1-211ENST00000480016 RBM42Q9BTD8 480 aaKnown RBP14.32□□□□□ -0.12
EFEMP1-211ENST00000480016 ZBTB12Q9Y330 459 aaPredicted RBP14.32□□□□□ -0.12
EFEMP1-211ENST00000480016 IGF1RP08069 1367 aa14.32□□□□□ -0.12
EFEMP1-211ENST00000480016 FAM135BQ49AJ0 1406 aa14.32□□□□□ -0.12
EFEMP1-211ENST00000480016 NPATQ14207 1427 aa14.3□□□□□ -0.12
EFEMP1-211ENST00000480016 RAPGEF6Q8TEU7 1601 aa14.29□□□□□ -0.12
EFEMP1-211ENST00000480016 NUTM2BA6NNL0 878 aaPredicted RBP14.28□□□□□ -0.12
EFEMP1-211ENST00000480016 NUTM2EB1AL46 878 aaPredicted RBP14.28□□□□□ -0.12
EFEMP1-211ENST00000480016 ABCA8O94911 1581 aa14.28□□□□□ -0.12
EFEMP1-211ENST00000480016 C1QTNF8P60827 252 aa14.28□□□□□ -0.12
EFEMP1-211ENST00000480016 NUTM2DQ5VT03 806 aaPredicted RBP14.28□□□□□ -0.12
EFEMP1-211ENST00000480016 NUTM2AQ8IVF1 878 aaPredicted RBP14.28□□□□□ -0.12
EFEMP1-211ENST00000480016 RNF17Q9BXT8 1623 aaKnown RBP14.28□□□□□ -0.12
EFEMP1-211ENST00000480016 ESF1Q9H501 851 aaKnown RBP14.26□□□□□ -0.13
EFEMP1-211ENST00000480016 ARID3CA6NKF2 412 aa14.24□□□□□ -0.13
EFEMP1-211ENST00000480016 SUPT6HQ7KZ85 1726 aaKnown RBP14.24□□□□□ -0.13
EFEMP1-211ENST00000480016 RGS12O14924 1447 aa14.24□□□□□ -0.13
EFEMP1-211ENST00000480016 NEURL4Q96JN8 1562 aa14.22□□□□□ -0.13
EFEMP1-211ENST00000480016 UGGT2Q9NYU1 1516 aa14.22□□□□□ -0.13
EFEMP1-211ENST00000480016 CSRNP3Q8WYN3 585 aa14.22□□□□□ -0.13
EFEMP1-211ENST00000480016 ATP10BO94823 1461 aa14.22□□□□□ -0.13
EFEMP1-211ENST00000480016 ZNF142P52746 1687 aaPredicted RBP14.22□□□□□ -0.13
EFEMP1-211ENST00000480016 LRP6O75581 1613 aa14.22□□□□□ -0.13
EFEMP1-211ENST00000480016 CEP350Q5VT06 3117 aa14.21□□□□□ -0.13
EFEMP1-211ENST00000480016 JCADQ9P266 1359 aa14.21□□□□□ -0.14
EFEMP1-211ENST00000480016 CEP170BQ9Y4F5 1589 aaPredicted RBP14.2□□□□□ -0.14
EFEMP1-211ENST00000480016 ATAD2Q6PL18 1390 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms