RNA–Protein interactions for RNA: ENST00000479980.1

PDE1C-209, Transcript of phosphodiesterase 1C, humanhuman

TSL 4

Gene PDE1C, Length 787 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-209ENST00000479980 NUP160Q12769 1436 aa11.93□□□□□ -0.5
PDE1C-209ENST00000479980 MAP3K1Q13233 1512 aa11.92□□□□□ -0.5
PDE1C-209ENST00000479980 PELP1Q8IZL8 1130 aaKnown RBP11.92□□□□□ -0.5
PDE1C-209ENST00000479980 CFAP43Q8NDM7 1665 aa11.91□□□□□ -0.5
PDE1C-209ENST00000479980 FHOD3Q2V2M9 1422 aa11.91□□□□□ -0.5
PDE1C-209ENST00000479980 FMN1Q68DA7 1419 aa11.91□□□□□ -0.5
PDE1C-209ENST00000479980 PCF11O94913 1555 aaKnown RBP11.91□□□□□ -0.5
PDE1C-209ENST00000479980 FYCO1Q9BQS8 1478 aa11.9□□□□□ -0.5
PDE1C-209ENST00000479980 PAK3O75914 559 aaPredicted RBP11.9□□□□□ -0.5
PDE1C-209ENST00000479980 PCGF6Q9BYE7 350 aa11.9□□□□□ -0.5
PDE1C-209ENST00000479980 KIAA0556O60303 1618 aa11.89□□□□□ -0.51
PDE1C-209ENST00000479980 TIAM1Q13009 1591 aa11.88□□□□□ -0.51
PDE1C-209ENST00000479980 CASKIN1Q8WXD9 1431 aa11.88□□□□□ -0.51
PDE1C-209ENST00000479980 LRRIQ1Q96JM4 1722 aa11.86□□□□□ -0.51
PDE1C-209ENST00000479980 NPM1P06748 294 aaKnown RBP eCLIP11.86□□□□□ -0.51
PDE1C-209ENST00000479980 P3H3Q8IVL6 736 aa11.86□□□□□ -0.51
PDE1C-209ENST00000479980 PPARGC1BQ86YN6 1023 aaKnown RBP11.85□□□□□ -0.51
PDE1C-209ENST00000479980 DISP1Q96F81 1524 aa11.85□□□□□ -0.51
PDE1C-209ENST00000479980 HECW1Q76N89 1606 aa11.83□□□□□ -0.52
PDE1C-209ENST00000479980 SHROOM2Q13796 1616 aa11.82□□□□□ -0.52
PDE1C-209ENST00000479980 POTEMA6NI47 508 aa11.82□□□□□ -0.52
PDE1C-209ENST00000479980 CARMIL2Q6F5E8 1435 aa11.81□□□□□ -0.52
PDE1C-209ENST00000479980 ASTLQ6HA08 431 aaPredicted RBP11.81□□□□□ -0.52
PDE1C-209ENST00000479980 CCDC18Q5T9S5 1454 aa11.79□□□□□ -0.52
PDE1C-209ENST00000479980 LRRC9Q6ZRR7 1453 aa11.79□□□□□ -0.52
PDE1C-209ENST00000479980 POTEJP0CG39 1038 aa11.79□□□□□ -0.52
PDE1C-209ENST00000479980 MS4A3Q96HJ5 214 aa11.79□□□□□ -0.52
PDE1C-209ENST00000479980 JPH4Q96JJ6 628 aa11.79□□□□□ -0.52
PDE1C-209ENST00000479980 RAPGEF6Q8TEU7 1601 aa11.78□□□□□ -0.52
PDE1C-209ENST00000479980 CLASP1Q7Z460 1538 aa11.78□□□□□ -0.52
PDE1C-209ENST00000479980 ATMINO43313 823 aaPredicted RBP11.78□□□□□ -0.52
PDE1C-209ENST00000479980 POTEGQ6S5H5 508 aa11.77□□□□□ -0.53
PDE1C-209ENST00000479980 TTBK1Q5TCY1 1321 aaPredicted RBP11.77□□□□□ -0.53
PDE1C-209ENST00000479980 KANK4Q5T7N3 995 aaPredicted RBP11.76□□□□□ -0.53
PDE1C-209ENST00000479980 METRNQ9UJH8 293 aa11.76□□□□□ -0.53
PDE1C-209ENST00000479980 SUPT6HQ7KZ85 1726 aaKnown RBP11.74□□□□□ -0.53
PDE1C-209ENST00000479980 C7P10643 843 aa11.74□□□□□ -0.53
PDE1C-209ENST00000479980 EHBP1L1Q8N3D4 1523 aa11.74□□□□□ -0.53
PDE1C-209ENST00000479980 EPRSP07814 1512 aaKnown RBP11.73□□□□□ -0.53
PDE1C-209ENST00000479980 SLC39A7Q92504 469 aa11.73□□□□□ -0.53
PDE1C-209ENST00000479980 ATP1B4Q9UN42 357 aaPredicted RBP11.73□□□□□ -0.53
PDE1C-209ENST00000479980 PRG4Q92954 1404 aaPredicted RBP11.72□□□□□ -0.53
PDE1C-209ENST00000479980 ABCA8O94911 1581 aa11.71□□□□□ -0.53
PDE1C-209ENST00000479980 RRBP1Q9P2E9 1410 aaKnown RBP11.71□□□□□ -0.53
PDE1C-209ENST00000479980 NUP153P49790 1475 aaKnown RBP11.7□□□□□ -0.54
PDE1C-209ENST00000479980 MTUS2Q5JR59 1369 aa11.69□□□□□ -0.54
PDE1C-209ENST00000479980 CDK13Q14004 1512 aaKnown RBP11.68□□□□□ -0.54
PDE1C-209ENST00000479980 PROM2Q8N271 834 aa11.67□□□□□ -0.54
PDE1C-209ENST00000479980 CCDC61Q9Y6R9 512 aa11.67□□□□□ -0.54
PDE1C-209ENST00000479980 PLB1Q6P1J6 1458 aa11.67□□□□□ -0.54
PDE1C-209ENST00000479980 MAGI3Q5TCQ9 1506 aa11.66□□□□□ -0.54
PDE1C-209ENST00000479980 PTPRGP23470 1445 aa11.66□□□□□ -0.54
PDE1C-209ENST00000479980 CCNB3Q8WWL7 1395 aa11.66□□□□□ -0.54
PDE1C-209ENST00000479980 ARHGEF11O15085 1522 aa11.65□□□□□ -0.54
PDE1C-209ENST00000479980 ADCY10Q96PN6 1610 aa11.65□□□□□ -0.54
PDE1C-209ENST00000479980 LCE2DQ5TA82 110 aaPredicted RBP11.65□□□□□ -0.54
PDE1C-209ENST00000479980 TSPYL2Q9H2G4 693 aaPredicted RBP11.65□□□□□ -0.54
PDE1C-209ENST00000479980 PCDH10Q9P2E7 1040 aa11.65□□□□□ -0.54
PDE1C-209ENST00000479980 ERCC6L2Q5T890 1561 aa11.65□□□□□ -0.54
PDE1C-209ENST00000479980 ATN1P54259 1190 aaPredicted RBP11.64□□□□□ -0.55
PDE1C-209ENST00000479980 MAMSTRQ6ZN01 415 aa11.64□□□□□ -0.55
PDE1C-209ENST00000479980 PHLDB1Q86UU1 1377 aa11.64□□□□□ -0.55
PDE1C-209ENST00000479980 NCOA2Q15596 1464 aa11.63□□□□□ -0.55
PDE1C-209ENST00000479980 KIF12Q96FN5 646 aa11.62□□□□□ -0.55
PDE1C-209ENST00000479980 CDK11AQ9UQ88 783 aaPredicted RBP11.62□□□□□ -0.55
PDE1C-209ENST00000479980 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.62□□□□□ -0.55
PDE1C-209ENST00000479980 UACAQ9BZF9 1416 aa11.61□□□□□ -0.55
PDE1C-209ENST00000479980 ABCC2Q92887 1545 aa11.61□□□□□ -0.55
PDE1C-209ENST00000479980 ITSN2Q9NZM3 1697 aa11.61□□□□□ -0.55
PDE1C-209ENST00000479980 TROQ12816 1431 aaPredicted RBP11.6□□□□□ -0.55
PDE1C-209ENST00000479980 MYOM3Q5VTT5 1437 aa11.6□□□□□ -0.55
PDE1C-209ENST00000479980 POTEFA5A3E0 1075 aa11.6□□□□□ -0.55
PDE1C-209ENST00000479980 FGD6Q6ZV73 1430 aa11.6□□□□□ -0.55
PDE1C-209ENST00000479980 ATP10BO94823 1461 aa11.59□□□□□ -0.55
PDE1C-209ENST00000479980 PTPN23Q9H3S7 1636 aa11.59□□□□□ -0.55
PDE1C-209ENST00000479980 UHRF1BP1LA0JNW5 1464 aa11.58□□□□□ -0.56
PDE1C-209ENST00000479980 HRCP23327 699 aa11.58□□□□□ -0.56
PDE1C-209ENST00000479980 KIF14Q15058 1648 aa11.57□□□□□ -0.56
PDE1C-209ENST00000479980 BMP2KQ9NSY1 1161 aaPredicted RBP11.57□□□□□ -0.56
PDE1C-209ENST00000479980 TRPC6Q9Y210 931 aa11.57□□□□□ -0.56
PDE1C-209ENST00000479980 MIA2Q96PC5 1412 aa11.56□□□□□ -0.56
PDE1C-209ENST00000479980 CDC42BPAQ5VT25 1732 aa11.55□□□□□ -0.56
PDE1C-209ENST00000479980 ARID3CA6NKF2 412 aa11.55□□□□□ -0.56
PDE1C-209ENST00000479980 ZCCHC11Q5TAX3 1644 aaKnown RBP11.55□□□□□ -0.56
PDE1C-209ENST00000479980 TCOF1Q13428 1488 aaKnown RBP11.55□□□□□ -0.56
PDE1C-209ENST00000479980 FAM163AQ96GL9 167 aaPredicted RBP11.54□□□□□ -0.56
PDE1C-209ENST00000479980 SCUBE2Q9NQ36 999 aa11.54□□□□□ -0.56
PDE1C-209ENST00000479980 PLEKHD1A6NEE1 506 aa11.53□□□□□ -0.56
PDE1C-209ENST00000479980 KDM5BQ9UGL1 1544 aa11.53□□□□□ -0.56
PDE1C-209ENST00000479980 MAP3K13O43283 966 aa11.52□□□□□ -0.57
PDE1C-209ENST00000479980 ZEB1P37275 1124 aaPredicted RBP11.52□□□□□ -0.57
PDE1C-209ENST00000479980 FAM50AQ14320 339 aaKnown RBP11.51□□□□□ -0.57
PDE1C-209ENST00000479980 TIE1P35590 1138 aa11.5□□□□□ -0.57
PDE1C-209ENST00000479980 ABCC10Q5T3U5 1492 aa11.5□□□□□ -0.57
PDE1C-209ENST00000479980 MYO5CQ9NQX4 1742 aa11.49□□□□□ -0.57
PDE1C-209ENST00000479980 PREX2Q70Z35 1606 aa11.49□□□□□ -0.57
PDE1C-209ENST00000479980 CDC42BPBQ9Y5S2 1711 aa11.49□□□□□ -0.57
PDE1C-209ENST00000479980 RASEFQ8IZ41 740 aa11.48□□□□□ -0.57
PDE1C-209ENST00000479980 GPATCH8Q9UKJ3 1502 aaKnown RBP11.48□□□□□ -0.57
PDE1C-209ENST00000479980 DNMT1P26358 1616 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms