RNA–Protein interactions for RNA: ENST00000479901.5

AGAP3-216, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 5 BASIC

Gene AGAP3, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-216ENST00000479901 GCC2Q8IWJ2 1684 aa38.48■■■■□ 3.75
AGAP3-216ENST00000479901 SCAF1Q9H7N4 1312 aaKnown RBP38.44■■■■□ 3.74
AGAP3-216ENST00000479901 ASXL2Q76L83 1435 aa38.43■■■■□ 3.74
AGAP3-216ENST00000479901 SIN3AQ96ST3 1273 aa38.41■■■■□ 3.74
AGAP3-216ENST00000479901 ATP10BO94823 1461 aa38.41■■■■□ 3.74
AGAP3-216ENST00000479901 NEUROD1Q13562 356 aa38.4■■■■□ 3.74
AGAP3-216ENST00000479901 CDK11AQ9UQ88 783 aaPredicted RBP38.4■■■■□ 3.74
AGAP3-216ENST00000479901 ABCC10Q5T3U5 1492 aa38.34■■■■□ 3.73
AGAP3-216ENST00000479901 FAM69CQ0P6D2 419 aa38.32■■■■□ 3.73
AGAP3-216ENST00000479901 KIF13AQ9H1H9 1805 aa38.32■■■■□ 3.73
AGAP3-216ENST00000479901 TROQ12816 1431 aaPredicted RBP38.3■■■■□ 3.72
AGAP3-216ENST00000479901 DIP2BQ9P265 1576 aa38.29■■■■□ 3.72
AGAP3-216ENST00000479901 DNMT1P26358 1616 aaKnown RBP38.25■■■■□ 3.71
AGAP3-216ENST00000479901 ROCK1Q13464 1354 aa38.24■■■■□ 3.71
AGAP3-216ENST00000479901 PPP1R15AO75807 674 aaPredicted RBP38.24■■■■□ 3.71
AGAP3-216ENST00000479901 WDR7Q9Y4E6 1490 aa38.23■■■■□ 3.71
AGAP3-216ENST00000479901 ITSN2Q9NZM3 1697 aa38.22■■■■□ 3.71
AGAP3-216ENST00000479901 KCNH8Q96L42 1107 aa38.21■■■■□ 3.71
AGAP3-216ENST00000479901 DAPK1P53355 1430 aa38.21■■■■□ 3.71
AGAP3-216ENST00000479901 RRP7BPQ9NSQ0 103 aa38.19■■■■□ 3.7
AGAP3-216ENST00000479901 CHIC2Q9UKJ5 165 aa38.16■■■■□ 3.7
AGAP3-216ENST00000479901 TONSLQ96HA7 1378 aa38.15■■■■□ 3.7
AGAP3-216ENST00000479901 ABCC5O15440 1437 aa38.14■■■■□ 3.7
AGAP3-216ENST00000479901 KDM6BO15054 1643 aa38.12■■■■□ 3.69
AGAP3-216ENST00000479901 GPATCH8Q9UKJ3 1502 aaKnown RBP38.06■■■■□ 3.68
AGAP3-216ENST00000479901 GLI2P10070 1586 aa38.06■■■■□ 3.68
AGAP3-216ENST00000479901 KIF14Q15058 1648 aa38.06■■■■□ 3.68
AGAP3-216ENST00000479901 DENND4BO75064 1496 aaPredicted RBP38.04■■■■□ 3.68
AGAP3-216ENST00000479901 PLEKHD1A6NEE1 506 aa38.04■■■■□ 3.68
AGAP3-216ENST00000479901 TSPOAP1O95153 1857 aa38.03■■■■□ 3.68
AGAP3-216ENST00000479901 CAMSAP2Q08AD1 1489 aa38.03■■■■□ 3.68
AGAP3-216ENST00000479901 YTHDC1Q96MU7 727 aaKnown RBP38.02■■■■□ 3.68
AGAP3-216ENST00000479901 ADGBQ8N7X0 1667 aa37.98■■■■□ 3.67
AGAP3-216ENST00000479901 ZNF644Q9H582 1327 aaPredicted RBP37.98■■■■□ 3.67
AGAP3-216ENST00000479901 TRIM52Q96A61 297 aa37.97■■■■□ 3.67
AGAP3-216ENST00000479901 CFDP1Q9UEE9 299 aaPredicted RBP37.96■■■■□ 3.67
AGAP3-216ENST00000479901 MAP3K4Q9Y6R4 1608 aa37.95■■■■□ 3.67
AGAP3-216ENST00000479901 CROCC2H7BZ55 1655 aa37.95■■■■□ 3.67
AGAP3-216ENST00000479901 MPHOSPH9Q99550 1183 aa37.94■■■■□ 3.66
AGAP3-216ENST00000479901 PPRC1Q5VV67 1664 aaKnown RBP37.92■■■■□ 3.66
AGAP3-216ENST00000479901 ADGRL2O95490 1459 aa37.91■■■■□ 3.66
AGAP3-216ENST00000479901 GTF3C3Q9Y5Q9 886 aa37.91■■■■□ 3.66
AGAP3-216ENST00000479901 CDC42BPAQ5VT25 1732 aa37.89■■■■□ 3.66
AGAP3-216ENST00000479901 CD109Q6YHK3 1445 aa37.88■■■■□ 3.65
AGAP3-216ENST00000479901 ABCA9Q8IUA7 1624 aa37.84■■■■□ 3.65
AGAP3-216ENST00000479901 NCOA1Q15788 1441 aa37.83■■■■□ 3.65
AGAP3-216ENST00000479901 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.82■■■■□ 3.646e-7■■■■□ 20.4
AGAP3-216ENST00000479901 TTC37Q6PGP7 1564 aa37.78■■■■□ 3.64
AGAP3-216ENST00000479901 SHANK2Q9UPX8 1470 aa37.78■■■■□ 3.64
AGAP3-216ENST00000479901 ANKRD30BQ9BXX2 1392 aa37.75■■■■□ 3.63
AGAP3-216ENST00000479901 ANKRD30AQ9BXX3 1397 aa37.73■■■■□ 3.63
AGAP3-216ENST00000479901 DDX10Q13206 875 aaKnown RBP37.71■■■■□ 3.63
AGAP3-216ENST00000479901 RPRD2Q5VT52 1461 aaKnown RBP37.7■■■■□ 3.63
AGAP3-216ENST00000479901 ZNF777Q9ULD5 760 aaPredicted RBP37.69■■■■□ 3.62
AGAP3-216ENST00000479901 PZPP20742 1482 aa37.67■■■■□ 3.62
AGAP3-216ENST00000479901 ARHGEF5Q12774 1597 aa37.66■■■■□ 3.62
AGAP3-216ENST00000479901 TEX14Q8IWB6 1497 aa37.66■■■■□ 3.62
AGAP3-216ENST00000479901 COL17A1Q9UMD9 1497 aaPredicted RBP37.65■■■■□ 3.62
AGAP3-216ENST00000479901 SLC4A1APQ9BWU0 796 aaKnown RBP37.62■■■■□ 3.61
AGAP3-216ENST00000479901 PREX2Q70Z35 1606 aa37.6■■■■□ 3.61
AGAP3-216ENST00000479901 C9orf84Q5VXU9 1444 aa37.59■■■■□ 3.61
AGAP3-216ENST00000479901 HIRIP3Q9BW71 556 aaPredicted RBP37.58■■■■□ 3.61
AGAP3-216ENST00000479901 PLCH2O75038 1416 aa37.56■■■■□ 3.6
AGAP3-216ENST00000479901 ANKRD50Q9ULJ7 1429 aa37.56■■■■□ 3.6
AGAP3-216ENST00000479901 FOXD1Q16676 465 aa37.56■■■■□ 3.6
AGAP3-216ENST00000479901 L3MBTL2Q969R5 705 aa37.56■■■■□ 3.6
AGAP3-216ENST00000479901 CDC42BPBQ9Y5S2 1711 aa37.54■■■■□ 3.6
AGAP3-216ENST00000479901 KIAA1107Q9UPP5 1409 aa37.52■■■■□ 3.6
AGAP3-216ENST00000479901 FANCAO15360 1455 aa37.51■■■■□ 3.6
AGAP3-216ENST00000479901 MBD5Q9P267 1494 aa37.51■■■■□ 3.6
AGAP3-216ENST00000479901 MYO5CQ9NQX4 1742 aa37.5■■■■□ 3.59
AGAP3-216ENST00000479901 SAMD9LQ8IVG5 1584 aa37.49■■■■□ 3.59
AGAP3-216ENST00000479901 KDM5DQ9BY66 1539 aa37.49■■■■□ 3.59
AGAP3-216ENST00000479901 TSPY4P0CV99 314 aa37.47■■■■□ 3.59
AGAP3-216ENST00000479901 TSPY10P0CW01 314 aa37.47■■■■□ 3.59
AGAP3-216ENST00000479901 RSPH4AQ5TD94 716 aa37.47■■■■□ 3.59
AGAP3-216ENST00000479901 CCER2I3L3R5 266 aa37.47■■■■□ 3.59
AGAP3-216ENST00000479901 NEO1Q92859 1461 aa37.46■■■■□ 3.59
AGAP3-216ENST00000479901 CCDC141Q6ZP82 1450 aa37.45■■■■□ 3.59
AGAP3-216ENST00000479901 ANP32CO43423 234 aa37.43■■■■□ 3.58
AGAP3-216ENST00000479901 EIF4G2P78344 907 aaKnown RBP eCLIP37.43■■■■□ 3.582e-6■■■■□ 23.5
AGAP3-216ENST00000479901 HSPA5P11021 654 aaKnown RBP37.42■■■■□ 3.58
AGAP3-216ENST00000479901 ARHGAP5Q13017 1502 aa37.42■■■■□ 3.58
AGAP3-216ENST00000479901 RAPGEF3O95398 923 aa37.41■■■■□ 3.58
AGAP3-216ENST00000479901 ARAP3Q8WWN8 1544 aa37.4■■■■□ 3.58
AGAP3-216ENST00000479901 EFCAB2Q5VUJ9 269 aa37.39■■■■□ 3.58
AGAP3-216ENST00000479901 MAST1Q9Y2H9 1570 aa37.38■■■■□ 3.57
AGAP3-216ENST00000479901 KIF15Q9NS87 1388 aa37.37■■■■□ 3.57
AGAP3-216ENST00000479901 HNRNPMP52272 730 aaKnown RBP eCLIP37.36■■■■□ 3.579e-13■■■■■ 29.6
AGAP3-216ENST00000479901 PKD2Q13563 968 aa37.33■■■■□ 3.57
AGAP3-216ENST00000479901 PLEKHH2Q8IVE3 1493 aa37.33■■■■□ 3.57
AGAP3-216ENST00000479901 CFAP74Q9C0B2 1584 aa37.32■■■■□ 3.57
AGAP3-216ENST00000479901 ADGRL1O94910 1474 aa37.31■■■■□ 3.56
AGAP3-216ENST00000479901 NBPF8Q3BBV2 869 aa37.3■■■■□ 3.56
AGAP3-216ENST00000479901 NUP155O75694 1391 aa37.3■■■■□ 3.56
AGAP3-216ENST00000479901 SCAPERQ9BY12 1400 aa37.29■■■■□ 3.56
AGAP3-216ENST00000479901 FRMPD1Q5SYB0 1578 aa37.27■■■■□ 3.56
AGAP3-216ENST00000479901 WASHC2AQ641Q2 1341 aa37.27■■■■□ 3.56
AGAP3-216ENST00000479901 SYCP2Q9BX26 1530 aa37.27■■■■□ 3.56
AGAP3-216ENST00000479901 ARHGEF12Q9NZN5 1544 aa37.23■■■■□ 3.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms