RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 AFAP1Q8N556 730 aa14.34□□□□□ -0.11
DDX56-211ENST00000479602 EHMT2Q96KQ7 1210 aa14.34□□□□□ -0.11
DDX56-211ENST00000479602 CFAP74Q9C0B2 1584 aa14.34□□□□□ -0.11
DDX56-211ENST00000479602 HECW1Q76N89 1606 aa14.33□□□□□ -0.11
DDX56-211ENST00000479602 ATP10AO60312 1499 aa14.33□□□□□ -0.12
DDX56-211ENST00000479602 SIGLEC1Q9BZZ2 1709 aa14.33□□□□□ -0.12
DDX56-211ENST00000479602 ZFYVE16Q7Z3T8 1539 aa14.33□□□□□ -0.12
DDX56-211ENST00000479602 FYCO1Q9BQS8 1478 aa14.32□□□□□ -0.12
DDX56-211ENST00000479602 ATP1B4Q9UN42 357 aaPredicted RBP14.32□□□□□ -0.12
DDX56-211ENST00000479602 FBXO41Q8TF61 875 aa14.31□□□□□ -0.12
DDX56-211ENST00000479602 CASKIN1Q8WXD9 1431 aa14.31□□□□□ -0.12
DDX56-211ENST00000479602 PCF11O94913 1555 aaKnown RBP14.3□□□□□ -0.12
DDX56-211ENST00000479602 ARHGEF12Q9NZN5 1544 aa14.28□□□□□ -0.12
DDX56-211ENST00000479602 KIF14Q15058 1648 aa14.27□□□□□ -0.12
DDX56-211ENST00000479602 CCDC18Q5T9S5 1454 aa14.27□□□□□ -0.12
DDX56-211ENST00000479602 C9orf84Q5VXU9 1444 aa14.27□□□□□ -0.12
DDX56-211ENST00000479602 HSPA2P54652 639 aa14.27□□□□□ -0.13
DDX56-211ENST00000479602 KDM5CP41229 1560 aa14.26□□□□□ -0.13
DDX56-211ENST00000479602 MAP3K1Q13233 1512 aa14.26□□□□□ -0.13
DDX56-211ENST00000479602 ZNF518AQ6AHZ1 1483 aa14.26□□□□□ -0.13
DDX56-211ENST00000479602 MLH3Q9UHC1 1453 aa14.26□□□□□ -0.13
DDX56-211ENST00000479602 VPS8Q8N3P4 1428 aa14.26□□□□□ -0.13
DDX56-211ENST00000479602 MLECQ14165 292 aa14.26□□□□□ -0.13
DDX56-211ENST00000479602 TRAPPC8Q9Y2L5 1435 aa14.24□□□□□ -0.13
DDX56-211ENST00000479602 LRRIQ1Q96JM4 1722 aa14.24□□□□□ -0.13
DDX56-211ENST00000479602 RIMS1Q86UR5 1692 aaKnown RBP14.23□□□□□ -0.13
DDX56-211ENST00000479602 LOC105371045A0A1W2PR82 267 aa14.23□□□□□ -0.13
DDX56-211ENST00000479602 CEBPAP49715 358 aaPredicted RBP14.23□□□□□ -0.13
DDX56-211ENST00000479602 REREQ9P2R6 1566 aa14.22□□□□□ -0.13
DDX56-211ENST00000479602 MYO5CQ9NQX4 1742 aa14.21□□□□□ -0.13
DDX56-211ENST00000479602 ARHGAP5Q13017 1502 aa14.21□□□□□ -0.13
DDX56-211ENST00000479602 CDC42BPBQ9Y5S2 1711 aa14.2□□□□□ -0.14
DDX56-211ENST00000479602 AGLP35573 1532 aa14.2□□□□□ -0.14
DDX56-211ENST00000479602 GPATCH8Q9UKJ3 1502 aaKnown RBP14.19□□□□□ -0.14
DDX56-211ENST00000479602 DIP2CQ9Y2E4 1556 aa14.17□□□□□ -0.14
DDX56-211ENST00000479602 SETD1BQ9UPS6 1966 aaKnown RBP14.17□□□□□ -0.14
DDX56-211ENST00000479602 KIAA1107Q9UPP5 1409 aa14.16□□□□□ -0.14
DDX56-211ENST00000479602 ABCC1P33527 1531 aa14.16□□□□□ -0.14
DDX56-211ENST00000479602 PLPPR3Q6T4P5 718 aa14.16□□□□□ -0.14
DDX56-211ENST00000479602 CERKQ8TCT0 537 aa14.15□□□□□ -0.14
DDX56-211ENST00000479602 PREX2Q70Z35 1606 aa14.15□□□□□ -0.14
DDX56-211ENST00000479602 HNRNPMP52272 730 aaKnown RBP eCLIP14.13□□□□□ -0.15
DDX56-211ENST00000479602 FER1L4A9Z1Z3 1794 aa14.13□□□□□ -0.15
DDX56-211ENST00000479602 TIAM1Q13009 1591 aa14.13□□□□□ -0.15
DDX56-211ENST00000479602 ABCA6Q8N139 1617 aa14.12□□□□□ -0.15
DDX56-211ENST00000479602 KIDINS220Q9ULH0 1771 aa14.11□□□□□ -0.15
DDX56-211ENST00000479602 DMRT2Q9Y5R5 561 aa14.11□□□□□ -0.15
DDX56-211ENST00000479602 EHBP1L1Q8N3D4 1523 aa14.1□□□□□ -0.15
DDX56-211ENST00000479602 SAMD9LQ8IVG5 1584 aa14.1□□□□□ -0.15
DDX56-211ENST00000479602 CFDP1Q9UEE9 299 aaPredicted RBP14.1□□□□□ -0.15
DDX56-211ENST00000479602 SPAG9O60271 1321 aaKnown RBP14.1□□□□□ -0.15
DDX56-211ENST00000479602 CDC42BPAQ5VT25 1732 aa14.1□□□□□ -0.15
DDX56-211ENST00000479602 MYT1LQ9UL68 1186 aa14.09□□□□□ -0.15
DDX56-211ENST00000479602 ZNF777Q9ULD5 760 aaPredicted RBP14.09□□□□□ -0.15
DDX56-211ENST00000479602 CNTLNQ9NXG0 1405 aa14.08□□□□□ -0.15
DDX56-211ENST00000479602 ITSN2Q9NZM3 1697 aa14.08□□□□□ -0.16
DDX56-211ENST00000479602 MBD5Q9P267 1494 aa14.08□□□□□ -0.16
DDX56-211ENST00000479602 ZMYM3Q14202 1370 aa14.08□□□□□ -0.16
DDX56-211ENST00000479602 UHRF1BP1Q6BDS2 1440 aa14.07□□□□□ -0.16
DDX56-211ENST00000479602 PPP6R1Q9UPN7 881 aa14.07□□□□□ -0.16
DDX56-211ENST00000479602 ZNF644Q9H582 1327 aaPredicted RBP14.07□□□□□ -0.16
DDX56-211ENST00000479602 PTPRTO14522 1441 aa14.07□□□□□ -0.16
DDX56-211ENST00000479602 STRCQ7RTU9 1775 aa14.06□□□□□ -0.16
DDX56-211ENST00000479602 PLEKHH2Q8IVE3 1493 aa14.06□□□□□ -0.16
DDX56-211ENST00000479602 PREX1Q8TCU6 1659 aa14.06□□□□□ -0.16
DDX56-211ENST00000479602 CCNB3Q8WWL7 1395 aa14.06□□□□□ -0.16
DDX56-211ENST00000479602 NPATQ14207 1427 aa14.06□□□□□ -0.16
DDX56-211ENST00000479602 SYCP2Q9BX26 1530 aa14.05□□□□□ -0.16
DDX56-211ENST00000479602 LRRC9Q6ZRR7 1453 aa14.04□□□□□ -0.16
DDX56-211ENST00000479602 ESF1Q9H501 851 aaKnown RBP14.03□□□□□ -0.16
DDX56-211ENST00000479602 MTUS2Q5JR59 1369 aa14.03□□□□□ -0.16
DDX56-211ENST00000479602 RTEL1-TNFRSF6BF6WH68 1400 aa14.03□□□□□ -0.16
DDX56-211ENST00000479602 PLXNC1O60486 1568 aa14.03□□□□□ -0.16
DDX56-211ENST00000479602 C3P01024 1663 aa14.03□□□□□ -0.16
DDX56-211ENST00000479602 A2MP01023 1474 aa14.02□□□□□ -0.16
DDX56-211ENST00000479602 NCOA1Q15788 1441 aa14.01□□□□□ -0.17
DDX56-211ENST00000479602 ATP7AQ04656 1500 aa14□□□□□ -0.17
DDX56-211ENST00000479602 PTPRKQ15262 1439 aa14□□□□□ -0.17
DDX56-211ENST00000479602 DHX29Q7Z478 1369 aaKnown RBP14□□□□□ -0.17
DDX56-211ENST00000479602 RSPH4AQ5TD94 716 aa14□□□□□ -0.17
DDX56-211ENST00000479602 SUPT6HQ7KZ85 1726 aaKnown RBP14□□□□□ -0.17
DDX56-211ENST00000479602 INO80Q9ULG1 1556 aaPredicted RBP14□□□□□ -0.17
DDX56-211ENST00000479602 LTBP4Q8N2S1 1624 aa13.98□□□□□ -0.17
DDX56-211ENST00000479602 GGT6Q6P531 493 aa13.98□□□□□ -0.17
DDX56-211ENST00000479602 MROH2AA6NES4 1674 aa13.96□□□□□ -0.17
DDX56-211ENST00000479602 PKD2Q13563 968 aa13.94□□□□□ -0.18
DDX56-211ENST00000479602 TCOF1Q13428 1488 aaKnown RBP13.93□□□□□ -0.18
DDX56-211ENST00000479602 NCOA2Q15596 1464 aa13.93□□□□□ -0.18
DDX56-211ENST00000479602 NCKAP5LQ9HCH0 1330 aa13.93□□□□□ -0.18
DDX56-211ENST00000479602 PLA2R1Q13018 1463 aa13.93□□□□□ -0.18
DDX56-211ENST00000479602 MIA2Q96PC5 1412 aa13.92□□□□□ -0.18
DDX56-211ENST00000479602 IQSEC2Q5JU85 1478 aa13.92□□□□□ -0.18
DDX56-211ENST00000479602 CAMSAP1Q5T5Y3 1602 aa13.91□□□□□ -0.18
DDX56-211ENST00000479602 FBXO31Q5XUX0 539 aaPredicted RBP13.91□□□□□ -0.18
DDX56-211ENST00000479602 CCDC141Q6ZP82 1450 aa13.89□□□□□ -0.19
DDX56-211ENST00000479602 KIF3BO15066 747 aa13.89□□□□□ -0.19
DDX56-211ENST00000479602 APLP2Q06481 763 aa13.89□□□□□ -0.19
DDX56-211ENST00000479602 KANK4Q5T7N3 995 aaPredicted RBP13.89□□□□□ -0.19
DDX56-211ENST00000479602 MYOM3Q5VTT5 1437 aa13.88□□□□□ -0.19
DDX56-211ENST00000479602 ADGBQ8N7X0 1667 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms