RNA–Protein interactions for RNA: ENST00000479402.1

ACTR3B-204, Transcript of ARP3 actin related protein 3 homolog B, humanhuman

TSL 2

Gene ACTR3B, Length 5,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR3B-204ENST00000479402 MORC1Q86VD1 984 aa15.57■□□□□ 0.08
ACTR3B-204ENST00000479402 CUX2O14529 1486 aa15.56■□□□□ 0.08
ACTR3B-204ENST00000479402 RTN4Q9NQC3 1192 aaKnown RBP15.56■□□□□ 0.08
ACTR3B-204ENST00000479402 TPRNQ4KMQ1 711 aa15.54■□□□□ 0.08
ACTR3B-204ENST00000479402 RWDD1Q9H446 243 aaPredicted RBP15.54■□□□□ 0.08
ACTR3B-204ENST00000479402 SENP3-EIF4A1A0A087X0R7 540 aa15.53■□□□□ 0.08
ACTR3B-204ENST00000479402 EIF3AQ14152 1382 aaKnown RBP15.53■□□□□ 0.08
ACTR3B-204ENST00000479402 RCAN3Q9UKA8 241 aa15.52■□□□□ 0.08
ACTR3B-204ENST00000479402 PMFBP1Q8TBY8 1022 aa15.52■□□□□ 0.08
ACTR3B-204ENST00000479402 SOGA1O94964 1423 aa15.52■□□□□ 0.07
ACTR3B-204ENST00000479402 FMN1Q68DA7 1419 aa15.51■□□□□ 0.07
ACTR3B-204ENST00000479402 SYAP1Q96A49 352 aaPredicted RBP15.51■□□□□ 0.07
ACTR3B-204ENST00000479402 HTATSF1O43719 755 aaKnown RBP15.51■□□□□ 0.07
ACTR3B-204ENST00000479402 ROCK2O75116 1388 aaKnown RBP15.51■□□□□ 0.07
ACTR3B-204ENST00000479402 CHMP4AQ9BY43 222 aa15.5■□□□□ 0.07
ACTR3B-204ENST00000479402 DRC7Q8IY82 874 aa15.49■□□□□ 0.07
ACTR3B-204ENST00000479402 ERCC6Q03468 1493 aa15.49■□□□□ 0.07
ACTR3B-204ENST00000479402 HDGFL2Q7Z4V5 671 aaPredicted RBP15.48■□□□□ 0.07
ACTR3B-204ENST00000479402 PHLDB1Q86UU1 1377 aa15.48■□□□□ 0.07
ACTR3B-204ENST00000479402 PDE3BQ13370 1112 aa15.48■□□□□ 0.07
ACTR3B-204ENST00000479402 SENP3Q9H4L4 574 aaPredicted RBP15.48■□□□□ 0.07
ACTR3B-204ENST00000479402 KIAA2012Q0VF49 1180 aa15.48■□□□□ 0.07
ACTR3B-204ENST00000479402 RAB3GAP2Q9H2M9 1393 aa15.48■□□□□ 0.07
ACTR3B-204ENST00000479402 RTF1Q92541 710 aaKnown RBP15.47■□□□□ 0.07
ACTR3B-204ENST00000479402 NAP1L2Q9ULW6 460 aaPredicted RBP15.47■□□□□ 0.07
ACTR3B-204ENST00000479402 CECR2Q9BXF3 1484 aa15.47■□□□□ 0.07
ACTR3B-204ENST00000479402 SRPK2P78362 688 aaKnown RBP15.46■□□□□ 0.07
ACTR3B-204ENST00000479402 GOLGA2Q08379 1002 aa15.46■□□□□ 0.07
ACTR3B-204ENST00000479402 KIAA1211Q6ZU35 1233 aa15.46■□□□□ 0.07
ACTR3B-204ENST00000479402 CARMIL2Q6F5E8 1435 aa15.46■□□□□ 0.06
ACTR3B-204ENST00000479402 ANKRD30AQ9BXX3 1397 aa15.45■□□□□ 0.06
ACTR3B-204ENST00000479402 PLEKHG5O94827 1062 aa15.45■□□□□ 0.06
ACTR3B-204ENST00000479402 IPO9Q96P70 1041 aaKnown RBP15.45■□□□□ 0.06
ACTR3B-204ENST00000479402 PKD2Q13563 968 aa15.44■□□□□ 0.06
ACTR3B-204ENST00000479402 SMARCA2P51531 1590 aa15.44■□□□□ 0.06
ACTR3B-204ENST00000479402 CSPP1Q1MSJ5 1256 aa15.43■□□□□ 0.06
ACTR3B-204ENST00000479402 GOLGA6L3A6NEY3 463 aa15.42■□□□□ 0.06
ACTR3B-204ENST00000479402 MPHOSPH9Q99550 1183 aa15.42■□□□□ 0.06
ACTR3B-204ENST00000479402 TPM4P67936 248 aa15.41■□□□□ 0.06
ACTR3B-204ENST00000479402 CCDC88BA6NC98 1476 aa15.41■□□□□ 0.06
ACTR3B-204ENST00000479402 HDAC5Q9UQL6 1122 aa15.41■□□□□ 0.06
ACTR3B-204ENST00000479402 ITPRIPQ8IWB1 547 aa15.4■□□□□ 0.06
ACTR3B-204ENST00000479402 GNL2Q13823 731 aaKnown RBP15.4■□□□□ 0.06
ACTR3B-204ENST00000479402 SPRYD3Q8NCJ5 442 aa15.39■□□□□ 0.05
ACTR3B-204ENST00000479402 USP35Q9P2H5 1018 aa15.39■□□□□ 0.05
ACTR3B-204ENST00000479402 NPHP1O15259 732 aa15.39■□□□□ 0.05
ACTR3B-204ENST00000479402 TSHZ2Q9NRE2 1034 aa15.39■□□□□ 0.05
ACTR3B-204ENST00000479402 LMOD2Q6P5Q4 547 aa15.38■□□□□ 0.05
ACTR3B-204ENST00000479402 HMMRO75330 724 aa15.37■□□□□ 0.05
ACTR3B-204ENST00000479402 GPATCH3Q96I76 525 aa15.37■□□□□ 0.05
ACTR3B-204ENST00000479402 KIF15Q9NS87 1388 aa15.37■□□□□ 0.05
ACTR3B-204ENST00000479402 NLRP13Q86W25 1043 aa15.36■□□□□ 0.05
ACTR3B-204ENST00000479402 ABCC8Q09428 1581 aa15.36■□□□□ 0.05
ACTR3B-204ENST00000479402 TOP2AP11388 1531 aaKnown RBP15.36■□□□□ 0.05
ACTR3B-204ENST00000479402 NUP155O75694 1391 aa15.36■□□□□ 0.05
ACTR3B-204ENST00000479402 PHF14O94880 888 aa15.35■□□□□ 0.05
ACTR3B-204ENST00000479402 CCDC34Q96HJ3 373 aa15.35■□□□□ 0.05
ACTR3B-204ENST00000479402 KANK4Q5T7N3 995 aaPredicted RBP15.35■□□□□ 0.05
ACTR3B-204ENST00000479402 U2AF1L5P0DN76 240 aaPredicted RBP15.35■□□□□ 0.05
ACTR3B-204ENST00000479402 U2AF1Q01081 240 aaKnown RBP eCLIP15.35■□□□□ 0.05
ACTR3B-204ENST00000479402 LMOD3Q0VAK6 560 aa15.34■□□□□ 0.05
ACTR3B-204ENST00000479402 SPAG9O60271 1321 aaKnown RBP15.34■□□□□ 0.05
ACTR3B-204ENST00000479402 DDX11L8A8MPP1 907 aa15.34■□□□□ 0.05
ACTR3B-204ENST00000479402 CCDC18Q5T9S5 1454 aa15.33■□□□□ 0.05
ACTR3B-204ENST00000479402 CENPJQ9HC77 1338 aaPredicted RBP15.33■□□□□ 0.04
ACTR3B-204ENST00000479402 RSPH4AQ5TD94 716 aa15.33■□□□□ 0.04
ACTR3B-204ENST00000479402 TAOK2Q9UL54 1235 aa15.33■□□□□ 0.04
ACTR3B-204ENST00000479402 TULP1O00294 542 aaPredicted RBP15.32■□□□□ 0.04
ACTR3B-204ENST00000479402 STK31Q9BXU1 1019 aa15.32■□□□□ 0.04
ACTR3B-204ENST00000479402 SLKQ9H2G2 1235 aaPredicted RBP15.32■□□□□ 0.04
ACTR3B-204ENST00000479402 MROH2BQ7Z745 1585 aa15.31■□□□□ 0.04
ACTR3B-204ENST00000479402 MFAP1P55081 439 aaKnown RBP15.31■□□□□ 0.04
ACTR3B-204ENST00000479402 SMC4Q9NTJ3 1288 aa15.31■□□□□ 0.04
ACTR3B-204ENST00000479402 MYBBP1AQ9BQG0 1328 aaKnown RBP15.31■□□□□ 0.04
ACTR3B-204ENST00000479402 TERF2IPQ9NYB0 399 aa15.3■□□□□ 0.04
ACTR3B-204ENST00000479402 RAPGEF2Q9Y4G8 1499 aa15.3■□□□□ 0.04
ACTR3B-204ENST00000479402 PDS5BQ9NTI5 1447 aa15.3■□□□□ 0.04
ACTR3B-204ENST00000479402 CENPQQ7L2Z9 268 aaPredicted RBP15.29■□□□□ 0.04
ACTR3B-204ENST00000479402 ST18O60284 1047 aa15.28■□□□□ 0.04
ACTR3B-204ENST00000479402 EFCAB2Q5VUJ9 269 aa15.28■□□□□ 0.04
ACTR3B-204ENST00000479402 GZF1Q9H116 711 aaPredicted RBP15.28■□□□□ 0.04
ACTR3B-204ENST00000479402 SKOR2Q2VWA4 1001 aaPredicted RBP15.27■□□□□ 0.04
ACTR3B-204ENST00000479402 CHMP4CQ96CF2 233 aa15.27■□□□□ 0.03
ACTR3B-204ENST00000479402 KIF3AQ9Y496 699 aa15.26■□□□□ 0.03
ACTR3B-204ENST00000479402 UACAQ9BZF9 1416 aa15.26■□□□□ 0.03
ACTR3B-204ENST00000479402 APBB1O00213 710 aa15.25■□□□□ 0.03
ACTR3B-204ENST00000479402 FOXD1Q16676 465 aa15.25■□□□□ 0.03
ACTR3B-204ENST00000479402 RSPH6AQ9H0K4 717 aa15.25■□□□□ 0.03
ACTR3B-204ENST00000479402 GOLGA6L1Q8N7Z2 621 aa15.25■□□□□ 0.03
ACTR3B-204ENST00000479402 L3MBTL2Q969R5 705 aa15.24■□□□□ 0.03
ACTR3B-204ENST00000479402 SAFB2Q14151 953 aaKnown RBP eCLIP15.24■□□□□ 0.03
ACTR3B-204ENST00000479402 FAM161AQ3B820 660 aa15.24■□□□□ 0.03
ACTR3B-204ENST00000479402 ZBED9Q6R2W3 1325 aa15.23■□□□□ 0.03
ACTR3B-204ENST00000479402 STK26Q9P289 416 aa15.23■□□□□ 0.03
ACTR3B-204ENST00000479402 HSP90B1P14625 803 aaKnown RBP15.22■□□□□ 0.03
ACTR3B-204ENST00000479402 DHX57Q6P158 1386 aaKnown RBP15.22■□□□□ 0.03
ACTR3B-204ENST00000479402 TRIM6-TRIM34B2RNG4 842 aa15.21■□□□□ 0.03
ACTR3B-204ENST00000479402 NGEFQ8N5V2 710 aa15.21■□□□□ 0.03
ACTR3B-204ENST00000479402 GGT6Q6P531 493 aa15.21■□□□□ 0.03
ACTR3B-204ENST00000479402 KIF16BQ96L93 1317 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms