RNA–Protein interactions for RNA: ENST00000479365.5

SSR1-206, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-206ENST00000479365 GLI2P10070 1586 aa12.26□□□□□ -0.45
SSR1-206ENST00000479365 MIER1Q8N108 512 aa12.25□□□□□ -0.45
SSR1-206ENST00000479365 ABCA8O94911 1581 aa12.25□□□□□ -0.45
SSR1-206ENST00000479365 TSPOAP1O95153 1857 aa12.25□□□□□ -0.45
SSR1-206ENST00000479365 EPRSP07814 1512 aaKnown RBP12.24□□□□□ -0.45
SSR1-206ENST00000479365 PPRC1Q5VV67 1664 aaKnown RBP12.24□□□□□ -0.45
SSR1-206ENST00000479365 PLCD3Q8N3E9 789 aa12.24□□□□□ -0.45
SSR1-206ENST00000479365 KDM6BO15054 1643 aa12.23□□□□□ -0.45
SSR1-206ENST00000479365 EEA1Q15075 1411 aa12.22□□□□□ -0.45
SSR1-206ENST00000479365 FAM9AQ8IZU1 332 aaPredicted RBP12.22□□□□□ -0.45
SSR1-206ENST00000479365 P3H3Q8IVL6 736 aa12.21□□□□□ -0.45
SSR1-206ENST00000479365 SAMD9Q5K651 1589 aa12.2□□□□□ -0.46
SSR1-206ENST00000479365 WDR7Q9Y4E6 1490 aa12.2□□□□□ -0.46
SSR1-206ENST00000479365 MAP3K4Q9Y6R4 1608 aa12.19□□□□□ -0.46
SSR1-206ENST00000479365 IFNLR1Q8IU57 520 aaPredicted RBP12.19□□□□□ -0.46
SSR1-206ENST00000479365 CREBZFQ9NS37 354 aa12.19□□□□□ -0.46
SSR1-206ENST00000479365 COL17A1Q9UMD9 1497 aaPredicted RBP12.17□□□□□ -0.46
SSR1-206ENST00000479365 CHADLQ6NUI6 762 aa12.17□□□□□ -0.46
SSR1-206ENST00000479365 ARID3CA6NKF2 412 aa12.16□□□□□ -0.46
SSR1-206ENST00000479365 FXR2P51116 673 aaKnown RBP eCLIP12.16□□□□□ -0.461e-6■■■□□ 18.3
SSR1-206ENST00000479365 KIF21BO75037 1637 aa12.15□□□□□ -0.46
SSR1-206ENST00000479365 ATP10BO94823 1461 aa12.14□□□□□ -0.47
SSR1-206ENST00000479365 RANGAP1P46060 587 aaPredicted RBP12.14□□□□□ -0.47
SSR1-206ENST00000479365 PIP4P2Q8N4L2 257 aa12.14□□□□□ -0.47
SSR1-206ENST00000479365 FHOD3Q2V2M9 1422 aa12.13□□□□□ -0.47
SSR1-206ENST00000479365 KCNH8Q96L42 1107 aa12.13□□□□□ -0.47
SSR1-206ENST00000479365 PLEKHG5O94827 1062 aa12.12□□□□□ -0.47
SSR1-206ENST00000479365 PRKAR2AP13861 404 aaKnown RBP12.12□□□□□ -0.47
SSR1-206ENST00000479365 PLCB2Q00722 1185 aa12.12□□□□□ -0.47
SSR1-206ENST00000479365 KLHL34Q8N239 644 aa12.12□□□□□ -0.47
SSR1-206ENST00000479365 TEX14Q8IWB6 1497 aa12.12□□□□□ -0.47
SSR1-206ENST00000479365 RAPGEF6Q8TEU7 1601 aa12.11□□□□□ -0.47
SSR1-206ENST00000479365 KDM4FA0A1W2PPD8 638 aa12.11□□□□□ -0.47
SSR1-206ENST00000479365 MAGI3Q5TCQ9 1506 aa12.11□□□□□ -0.47
SSR1-206ENST00000479365 CD109Q6YHK3 1445 aa12.11□□□□□ -0.47
SSR1-206ENST00000479365 NUP153P49790 1475 aaKnown RBP12.1□□□□□ -0.47
SSR1-206ENST00000479365 CFAP43Q8NDM7 1665 aa12.09□□□□□ -0.47
SSR1-206ENST00000479365 MNX1P50219 401 aaPredicted RBP12.07□□□□□ -0.48
SSR1-206ENST00000479365 EFCAB5A4FU69 1503 aa12.06□□□□□ -0.48
SSR1-206ENST00000479365 ABCA9Q8IUA7 1624 aa12.04□□□□□ -0.48
SSR1-206ENST00000479365 ZBTB47Q9UFB7 747 aaPredicted RBP12.03□□□□□ -0.48
SSR1-206ENST00000479365 UBTFP17480 764 aaKnown RBP12.02□□□□□ -0.49
SSR1-206ENST00000479365 ADGRL1O94910 1474 aa12.02□□□□□ -0.49
SSR1-206ENST00000479365 ARHGAP35Q9NRY4 1499 aa12.02□□□□□ -0.49
SSR1-206ENST00000479365 FARP1Q9Y4F1 1045 aaPredicted RBP12.01□□□□□ -0.49
SSR1-206ENST00000479365 ARAP3Q8WWN8 1544 aa12.01□□□□□ -0.49
SSR1-206ENST00000479365 SPOCK2Q92563 424 aa12□□□□□ -0.49
SSR1-206ENST00000479365 CDK13Q14004 1512 aaKnown RBP11.99□□□□□ -0.49
SSR1-206ENST00000479365 PLEKHD1A6NEE1 506 aa11.97□□□□□ -0.49
SSR1-206ENST00000479365 NEO1Q92859 1461 aa11.96□□□□□ -0.49
SSR1-206ENST00000479365 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.96□□□□□ -0.58e-6■□□□□ 10.5
SSR1-206ENST00000479365 FMN1Q68DA7 1419 aa11.95□□□□□ -0.5
SSR1-206ENST00000479365 PHLDB1Q86UU1 1377 aa11.95□□□□□ -0.5
SSR1-206ENST00000479365 RAPGEF3O95398 923 aa11.95□□□□□ -0.5
SSR1-206ENST00000479365 FRMPD1Q5SYB0 1578 aa11.95□□□□□ -0.5
SSR1-206ENST00000479365 TTC37Q6PGP7 1564 aa11.95□□□□□ -0.5
SSR1-206ENST00000479365 NUBP1P53384 320 aa11.94□□□□□ -0.5
SSR1-206ENST00000479365 HECW1Q76N89 1606 aa11.93□□□□□ -0.5
SSR1-206ENST00000479365 ATP1B4Q9UN42 357 aaPredicted RBP11.91□□□□□ -0.5
SSR1-206ENST00000479365 AKNAQ7Z591 1439 aa11.91□□□□□ -0.5
SSR1-206ENST00000479365 FANCAO15360 1455 aa11.9□□□□□ -0.5
SSR1-206ENST00000479365 HAP1P54257 671 aaPredicted RBP11.9□□□□□ -0.5
SSR1-206ENST00000479365 LRRIQ1Q96JM4 1722 aa11.89□□□□□ -0.51
SSR1-206ENST00000479365 RASEFQ8IZ41 740 aa11.89□□□□□ -0.51
SSR1-206ENST00000479365 KIF14Q15058 1648 aa11.88□□□□□ -0.51
SSR1-206ENST00000479365 DENND4BO75064 1496 aaPredicted RBP11.88□□□□□ -0.51
SSR1-206ENST00000479365 PCF11O94913 1555 aaKnown RBP11.88□□□□□ -0.51
SSR1-206ENST00000479365 PLCH2O75038 1416 aa11.87□□□□□ -0.51
SSR1-206ENST00000479365 RICTORQ6R327 1708 aa11.87□□□□□ -0.51
SSR1-206ENST00000479365 BCANQ96GW7 911 aa11.87□□□□□ -0.51
SSR1-206ENST00000479365 TROQ12816 1431 aaPredicted RBP11.86□□□□□ -0.51
SSR1-206ENST00000479365 CFAP74Q9C0B2 1584 aa11.86□□□□□ -0.51
SSR1-206ENST00000479365 CASKIN1Q8WXD9 1431 aa11.86□□□□□ -0.51
SSR1-206ENST00000479365 CIZ1Q9ULV3 898 aaPredicted RBP11.85□□□□□ -0.51
SSR1-206ENST00000479365 ARHGEF40Q8TER5 1519 aa11.85□□□□□ -0.51
SSR1-206ENST00000479365 ZMYM4Q5VZL5 1548 aa11.84□□□□□ -0.51
SSR1-206ENST00000479365 CLIP1P30622 1438 aa11.84□□□□□ -0.51
SSR1-206ENST00000479365 YEATS2Q9ULM3 1422 aa11.84□□□□□ -0.51
SSR1-206ENST00000479365 ADAMTSL3P82987 1691 aa11.84□□□□□ -0.51
SSR1-206ENST00000479365 CDK11AQ9UQ88 783 aaPredicted RBP11.83□□□□□ -0.52
SSR1-206ENST00000479365 POGZQ7Z3K3 1410 aa11.83□□□□□ -0.52
SSR1-206ENST00000479365 SCAPERQ9BY12 1400 aa11.83□□□□□ -0.52
SSR1-206ENST00000479365 DCAF8Q5TAQ9 597 aa11.82□□□□□ -0.52
SSR1-206ENST00000479365 POTEHQ6S545 545 aa11.82□□□□□ -0.52
SSR1-206ENST00000479365 TSPYL2Q9H2G4 693 aaPredicted RBP11.82□□□□□ -0.52
SSR1-206ENST00000479365 HECW2Q9P2P5 1572 aa11.82□□□□□ -0.52
SSR1-206ENST00000479365 MYO5CQ9NQX4 1742 aa11.82□□□□□ -0.52
SSR1-206ENST00000479365 SIGLEC1Q9BZZ2 1709 aa11.81□□□□□ -0.52
SSR1-206ENST00000479365 PRKCSHP14314 528 aaPredicted RBP11.81□□□□□ -0.52
SSR1-206ENST00000479365 FAM212AQ96EL1 285 aa11.81□□□□□ -0.52
SSR1-206ENST00000479365 CCDC18Q5T9S5 1454 aa11.81□□□□□ -0.52
SSR1-206ENST00000479365 FYCO1Q9BQS8 1478 aa11.81□□□□□ -0.52
SSR1-206ENST00000479365 ZFYVE16Q7Z3T8 1539 aa11.81□□□□□ -0.52
SSR1-206ENST00000479365 BCORL1Q5H9F3 1711 aa11.8□□□□□ -0.52
SSR1-206ENST00000479365 PKD2Q13563 968 aa11.8□□□□□ -0.52
SSR1-206ENST00000479365 EFCAB2Q5VUJ9 269 aa11.8□□□□□ -0.52
SSR1-206ENST00000479365 PTPRMP28827 1452 aa11.8□□□□□ -0.52
SSR1-206ENST00000479365 VSIG10Q8N0Z9 540 aa11.79□□□□□ -0.52
SSR1-206ENST00000479365 ARHGAP5Q13017 1502 aa11.79□□□□□ -0.52
SSR1-206ENST00000479365 ARID4BQ4LE39 1312 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms