RNA–Protein interactions for RNA: ENST00000479003.5

CHKB-208, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-208ENST00000479003 CDC42BPAQ5VT25 1732 aa39.99■■■■□ 3.99
CHKB-208ENST00000479003 ZNF644Q9H582 1327 aaPredicted RBP39.96■■■■□ 3.99
CHKB-208ENST00000479003 CFDP1Q9UEE9 299 aaPredicted RBP39.95■■■■□ 3.99
CHKB-208ENST00000479003 TTC37Q6PGP7 1564 aa39.9■■■■□ 3.98
CHKB-208ENST00000479003 GTF3C3Q9Y5Q9 886 aa39.89■■■■□ 3.98
CHKB-208ENST00000479003 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP39.89■■■■□ 3.984e-7■■■□□ 18.4
CHKB-208ENST00000479003 CAMSAP2Q08AD1 1489 aa39.88■■■■□ 3.98
CHKB-208ENST00000479003 KCNH8Q96L42 1107 aa39.86■■■■□ 3.97
CHKB-208ENST00000479003 ZNF777Q9ULD5 760 aaPredicted RBP39.83■■■■□ 3.97
CHKB-208ENST00000479003 DNMT1P26358 1616 aaKnown RBP39.81■■■■□ 3.96
CHKB-208ENST00000479003 PREX2Q70Z35 1606 aa39.81■■■■□ 3.96
CHKB-208ENST00000479003 RIMBP3CA6NJZ7 1639 aa39.79■■■■□ 3.96
CHKB-208ENST00000479003 RIMBP3BA6NNM3 1639 aa39.79■■■■□ 3.96
CHKB-208ENST00000479003 RIMBP3Q9UFD9 1639 aa39.79■■■■□ 3.96
CHKB-208ENST00000479003 CDC42BPBQ9Y5S2 1711 aa39.79■■■■□ 3.96
CHKB-208ENST00000479003 YTHDC1Q96MU7 727 aaKnown RBP39.79■■■■□ 3.96
CHKB-208ENST00000479003 DAPK1P53355 1430 aa39.79■■■■□ 3.96
CHKB-208ENST00000479003 WDR7Q9Y4E6 1490 aa39.78■■■■□ 3.96
CHKB-208ENST00000479003 HFM1A2PYH4 1435 aa39.76■■■■□ 3.96
CHKB-208ENST00000479003 ABCC5O15440 1437 aa39.76■■■■□ 3.96
CHKB-208ENST00000479003 CHIC2Q9UKJ5 165 aa39.76■■■■□ 3.95
CHKB-208ENST00000479003 ASXL2Q76L83 1435 aa39.72■■■■□ 3.95
CHKB-208ENST00000479003 MYO5CQ9NQX4 1742 aa39.71■■■■□ 3.95
CHKB-208ENST00000479003 NAIPQ13075 1403 aa39.69■■■■□ 3.94
CHKB-208ENST00000479003 SAMD9LQ8IVG5 1584 aa39.66■■■■□ 3.94
CHKB-208ENST00000479003 NPM1P06748 294 aaKnown RBP eCLIP39.66■■■■□ 3.94
CHKB-208ENST00000479003 ARHGAP5Q13017 1502 aa39.66■■■■□ 3.94
CHKB-208ENST00000479003 CYB5RLQ6IPT4 315 aa39.65■■■■□ 3.94
CHKB-208ENST00000479003 RRP7BPQ9NSQ0 103 aa39.64■■■■□ 3.94
CHKB-208ENST00000479003 AKNAQ7Z591 1439 aa39.62■■■■□ 3.93
CHKB-208ENST00000479003 CROCC2H7BZ55 1655 aa39.61■■■■□ 3.93
CHKB-208ENST00000479003 GCC2Q8IWJ2 1684 aa39.6■■■■□ 3.93
CHKB-208ENST00000479003 PLCH2O75038 1416 aa39.59■■■■□ 3.93
CHKB-208ENST00000479003 TIMELESSQ9UNS1 1208 aa39.58■■■■□ 3.93
CHKB-208ENST00000479003 MYT1Q01538 1121 aa39.56■■■■□ 3.92
CHKB-208ENST00000479003 ROCK1Q13464 1354 aa39.56■■■■□ 3.92
CHKB-208ENST00000479003 MBD5Q9P267 1494 aa39.54■■■■□ 3.92
CHKB-208ENST00000479003 SIN3AQ96ST3 1273 aa39.54■■■■□ 3.92
CHKB-208ENST00000479003 ABCA9Q8IUA7 1624 aa39.54■■■■□ 3.92
CHKB-208ENST00000479003 HNRNPMP52272 730 aaKnown RBP eCLIP39.53■■■■□ 3.92
CHKB-208ENST00000479003 ARHGEF5Q12774 1597 aa39.51■■■■□ 3.92
CHKB-208ENST00000479003 SYCP2Q9BX26 1530 aa39.5■■■■□ 3.91
CHKB-208ENST00000479003 KDM6BO15054 1643 aa39.49■■■■□ 3.91
CHKB-208ENST00000479003 ADGBQ8N7X0 1667 aa39.48■■■■□ 3.91
CHKB-208ENST00000479003 SHANK2Q9UPX8 1470 aa39.45■■■■□ 3.91
CHKB-208ENST00000479003 ADGRL2O95490 1459 aa39.45■■■■□ 3.91
CHKB-208ENST00000479003 ARAP3Q8WWN8 1544 aa39.44■■■■□ 3.9
CHKB-208ENST00000479003 NCOA1Q15788 1441 aa39.44■■■■□ 3.9
CHKB-208ENST00000479003 CCDC141Q6ZP82 1450 aa39.43■■■■□ 3.9
CHKB-208ENST00000479003 C9orf84Q5VXU9 1444 aa39.43■■■■□ 3.9
CHKB-208ENST00000479003 EFCAB2Q5VUJ9 269 aa39.42■■■■□ 3.9
CHKB-208ENST00000479003 PLEKHH2Q8IVE3 1493 aa39.4■■■■□ 3.9
CHKB-208ENST00000479003 KIAA1107Q9UPP5 1409 aa39.39■■■■□ 3.9
CHKB-208ENST00000479003 ARHGEF12Q9NZN5 1544 aa39.39■■■■□ 3.9
CHKB-208ENST00000479003 ABCC1P33527 1531 aa39.36■■■■□ 3.89
CHKB-208ENST00000479003 TSPY4P0CV99 314 aa39.35■■■■□ 3.89
CHKB-208ENST00000479003 TSPY10P0CW01 314 aa39.35■■■■□ 3.89
CHKB-208ENST00000479003 ANKRD30AQ9BXX3 1397 aa39.35■■■■□ 3.89
CHKB-208ENST00000479003 RSPH4AQ5TD94 716 aa39.32■■■■□ 3.89
CHKB-208ENST00000479003 FANCAO15360 1455 aa39.32■■■■□ 3.89
CHKB-208ENST00000479003 PPP1R15AO75807 674 aaPredicted RBP39.29■■■■□ 3.88
CHKB-208ENST00000479003 MAST1Q9Y2H9 1570 aa39.23■■■■□ 3.87
CHKB-208ENST00000479003 CD109Q6YHK3 1445 aa39.23■■■■□ 3.87
CHKB-208ENST00000479003 TRAPPC8Q9Y2L5 1435 aa39.23■■■■□ 3.87
CHKB-208ENST00000479003 TRIM52Q96A61 297 aa39.2■■■■□ 3.87
CHKB-208ENST00000479003 KIF15Q9NS87 1388 aa39.19■■■■□ 3.86
CHKB-208ENST00000479003 ANKRD50Q9ULJ7 1429 aa39.18■■■■□ 3.86
CHKB-208ENST00000479003 ADGRL1O94910 1474 aa39.15■■■■□ 3.86
CHKB-208ENST00000479003 TONSLQ96HA7 1378 aa39.15■■■■□ 3.86
CHKB-208ENST00000479003 DENND4BO75064 1496 aaPredicted RBP39.12■■■■□ 3.85
CHKB-208ENST00000479003 AFAP1Q8N556 730 aa39.1■■■■□ 3.85
CHKB-208ENST00000479003 PLXNC1O60486 1568 aa39.1■■■■□ 3.85
CHKB-208ENST00000479003 SCAPERQ9BY12 1400 aa39.09■■■■□ 3.85
CHKB-208ENST00000479003 MAP3K4Q9Y6R4 1608 aa39.06■■■■□ 3.84
CHKB-208ENST00000479003 GLI2P10070 1586 aa39.05■■■■□ 3.84
CHKB-208ENST00000479003 CFAP74Q9C0B2 1584 aa39.05■■■■□ 3.84
CHKB-208ENST00000479003 DIP2BQ9P265 1576 aa39.04■■■■□ 3.84
CHKB-208ENST00000479003 MPHOSPH9Q99550 1183 aa39.04■■■■□ 3.84
CHKB-208ENST00000479003 ZFYVE16Q7Z3T8 1539 aa39.01■■■■□ 3.84
CHKB-208ENST00000479003 DDX10Q13206 875 aaKnown RBP39.01■■■■□ 3.84
CHKB-208ENST00000479003 SPAG9O60271 1321 aaKnown RBP39■■■■□ 3.83
CHKB-208ENST00000479003 PZPP20742 1482 aa38.98■■■■□ 3.83
CHKB-208ENST00000479003 RTEL1-TNFRSF6BF6WH68 1400 aa38.96■■■■□ 3.83
CHKB-208ENST00000479003 FAM69CQ0P6D2 419 aa38.96■■■■□ 3.83
CHKB-208ENST00000479003 INO80Q9ULG1 1556 aaPredicted RBP38.94■■■■□ 3.82
CHKB-208ENST00000479003 DUOX2Q9NRD8 1548 aa38.93■■■■□ 3.82
CHKB-208ENST00000479003 NEO1Q92859 1461 aa38.92■■■■□ 3.82
CHKB-208ENST00000479003 ATP7AQ04656 1500 aa38.92■■■■□ 3.82
CHKB-208ENST00000479003 SLC4A1APQ9BWU0 796 aaKnown RBP38.92■■■■□ 3.82
CHKB-208ENST00000479003 FOXD1Q16676 465 aa38.9■■■■□ 3.82
CHKB-208ENST00000479003 ZNF518AQ6AHZ1 1483 aa38.9■■■■□ 3.82
CHKB-208ENST00000479003 POGZQ7Z3K3 1410 aa38.88■■■■□ 3.81
CHKB-208ENST00000479003 NUP155O75694 1391 aa38.87■■■■□ 3.81
CHKB-208ENST00000479003 HIRIP3Q9BW71 556 aaPredicted RBP38.86■■■■□ 3.81
CHKB-208ENST00000479003 KDM5DQ9BY66 1539 aa38.85■■■■□ 3.81
CHKB-208ENST00000479003 ERBINQ96RT1 1412 aa38.85■■■■□ 3.81
CHKB-208ENST00000479003 KDM5CP41229 1560 aa38.82■■■■□ 3.81
CHKB-208ENST00000479003 KIDINS220Q9ULH0 1771 aa38.8■■■■□ 3.8
CHKB-208ENST00000479003 UNC13BO14795 1591 aa38.8■■■■□ 3.8
CHKB-208ENST00000479003 TSPOAP1O95153 1857 aa38.79■■■■□ 3.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms