RNA–Protein interactions for RNA: ENST00000478351.1

TMEM35A-202, Transcript of transmembrane protein 35A, humanhuman

TSL 3

Gene TMEM35A, Length 743 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35A-202ENST00000478351 SMARCA2P51531 1590 aa10.59□□□□□ -0.71
TMEM35A-202ENST00000478351 G3V3G9 751 aa10.58□□□□□ -0.72
TMEM35A-202ENST00000478351 OTUD5Q96G74 571 aa10.58□□□□□ -0.72
TMEM35A-202ENST00000478351 MS4A4AQ96JQ5 239 aa10.58□□□□□ -0.72
TMEM35A-202ENST00000478351 DPY19L2Q6NUT2 758 aa10.57□□□□□ -0.72
TMEM35A-202ENST00000478351 BOLA1Q9Y3E2 137 aa10.56□□□□□ -0.72
TMEM35A-202ENST00000478351 ERCC6Q03468 1493 aa10.55□□□□□ -0.72
TMEM35A-202ENST00000478351 TMEM121BQ9BXQ6 578 aaPredicted RBP10.54□□□□□ -0.72
TMEM35A-202ENST00000478351 PEG3Q9GZU2 1588 aa10.54□□□□□ -0.72
TMEM35A-202ENST00000478351 BAZ1AQ9NRL2 1556 aaPredicted RBP10.53□□□□□ -0.72
TMEM35A-202ENST00000478351 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.53□□□□□ -0.72
TMEM35A-202ENST00000478351 NKX1-1Q15270 411 aaPredicted RBP10.52□□□□□ -0.73
TMEM35A-202ENST00000478351 C3orf67Q6ZVT6 689 aa10.52□□□□□ -0.73
TMEM35A-202ENST00000478351 BBXQ8WY36 941 aaPredicted RBP10.52□□□□□ -0.73
TMEM35A-202ENST00000478351 NESP48681 1621 aa10.51□□□□□ -0.73
TMEM35A-202ENST00000478351 BAZ1BQ9UIG0 1483 aaKnown RBP10.5□□□□□ -0.73
TMEM35A-202ENST00000478351 MICALL2Q8IY33 904 aa10.49□□□□□ -0.73
TMEM35A-202ENST00000478351 MROH2BQ7Z745 1585 aa10.46□□□□□ -0.74
TMEM35A-202ENST00000478351 SLAIN1Q8ND83 568 aa10.45□□□□□ -0.74
TMEM35A-202ENST00000478351 LAMC3Q9Y6N6 1575 aa10.44□□□□□ -0.74
TMEM35A-202ENST00000478351 GTPBP6O43824 516 aaPredicted RBP10.44□□□□□ -0.74
TMEM35A-202ENST00000478351 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.44□□□□□ -0.74
TMEM35A-202ENST00000478351 THOC2Q8NI27 1593 aaKnown RBP10.43□□□□□ -0.74
TMEM35A-202ENST00000478351 PPP1R37O75864 691 aa10.42□□□□□ -0.74
TMEM35A-202ENST00000478351 PDS5BQ9NTI5 1447 aa10.37□□□□□ -0.75
TMEM35A-202ENST00000478351 KIF21AQ7Z4S6 1674 aa10.37□□□□□ -0.75
TMEM35A-202ENST00000478351 SNPHO15079 494 aa10.36□□□□□ -0.75
TMEM35A-202ENST00000478351 SPRYD3Q8NCJ5 442 aa10.36□□□□□ -0.75
TMEM35A-202ENST00000478351 CADPSQ9ULU8 1353 aa10.35□□□□□ -0.75
TMEM35A-202ENST00000478351 TMEM92Q6UXU6 159 aa10.33□□□□□ -0.76
TMEM35A-202ENST00000478351 WIZO95785 1651 aa10.31□□□□□ -0.76
TMEM35A-202ENST00000478351 KIF3CO14782 793 aa10.31□□□□□ -0.76
TMEM35A-202ENST00000478351 TMC2Q8TDI7 906 aa10.3□□□□□ -0.76
TMEM35A-202ENST00000478351 PAXIP1Q6ZW49 1069 aaPredicted RBP10.29□□□□□ -0.76
TMEM35A-202ENST00000478351 MRC2Q9UBG0 1479 aa10.29□□□□□ -0.76
TMEM35A-202ENST00000478351 WDR62O43379 1518 aa10.28□□□□□ -0.76
TMEM35A-202ENST00000478351 C2orf72A6NCS6 295 aa10.27□□□□□ -0.77
TMEM35A-202ENST00000478351 CFAP44Q96MT7 982 aa10.27□□□□□ -0.77
TMEM35A-202ENST00000478351 GPHNQ9NQX3 736 aaPredicted RBP10.26□□□□□ -0.77
TMEM35A-202ENST00000478351 DOK7Q18PE1 504 aa10.25□□□□□ -0.77
TMEM35A-202ENST00000478351 PDE4AP27815 886 aa10.24□□□□□ -0.77
TMEM35A-202ENST00000478351 CRISPLD2Q9H0B8 497 aa10.24□□□□□ -0.77
TMEM35A-202ENST00000478351 CFTRP13569 1480 aa10.23□□□□□ -0.77
TMEM35A-202ENST00000478351 FAM163AQ96GL9 167 aaPredicted RBP10.23□□□□□ -0.77
TMEM35A-202ENST00000478351 RSF1Q96T23 1441 aaPredicted RBP10.23□□□□□ -0.77
TMEM35A-202ENST00000478351 RIMBP2O15034 1052 aa10.22□□□□□ -0.77
TMEM35A-202ENST00000478351 HOXB3P14651 431 aaPredicted RBP10.22□□□□□ -0.77
TMEM35A-202ENST00000478351 FOXK1P85037 733 aa10.22□□□□□ -0.77
TMEM35A-202ENST00000478351 CEP164Q9UPV0 1460 aa10.22□□□□□ -0.77
TMEM35A-202ENST00000478351 ZSWIM6Q9HCJ5 1215 aa10.21□□□□□ -0.77
TMEM35A-202ENST00000478351 FANCD2Q9BXW9 1451 aa10.21□□□□□ -0.78
TMEM35A-202ENST00000478351 NCKAP5LQ9HCH0 1330 aa10.19□□□□□ -0.78
TMEM35A-202ENST00000478351 ST18O60284 1047 aa10.19□□□□□ -0.78
TMEM35A-202ENST00000478351 TOP2AP11388 1531 aaKnown RBP10.18□□□□□ -0.78
TMEM35A-202ENST00000478351 SLC34A2O95436 690 aa10.18□□□□□ -0.78
TMEM35A-202ENST00000478351 LCE2DQ5TA82 110 aaPredicted RBP10.18□□□□□ -0.78
TMEM35A-202ENST00000478351 ZNF710Q8N1W2 664 aa10.18□□□□□ -0.78
TMEM35A-202ENST00000478351 DSG2Q14126 1118 aa10.16□□□□□ -0.78
TMEM35A-202ENST00000478351 MFSD10Q14728 455 aa10.16□□□□□ -0.78
TMEM35A-202ENST00000478351 CADPS2Q86UW7 1296 aa10.16□□□□□ -0.78
TMEM35A-202ENST00000478351 PLPP6Q8IY26 295 aa10.16□□□□□ -0.78
TMEM35A-202ENST00000478351 PLCB2Q00722 1185 aa10.15□□□□□ -0.78
TMEM35A-202ENST00000478351 URB2Q14146 1524 aaKnown RBP10.14□□□□□ -0.79
TMEM35A-202ENST00000478351 PPP1R15BQ5SWA1 713 aa10.14□□□□□ -0.79
TMEM35A-202ENST00000478351 DDX27Q96GQ7 796 aaKnown RBP10.14□□□□□ -0.79
TMEM35A-202ENST00000478351 LARP6Q9BRS8 491 aaKnown RBP10.14□□□□□ -0.79
TMEM35A-202ENST00000478351 HOXB1P14653 301 aaPredicted RBP10.13□□□□□ -0.79
TMEM35A-202ENST00000478351 GPR153Q6NV75 609 aa10.1□□□□□ -0.79
TMEM35A-202ENST00000478351 PTCD2Q8WV60 388 aaKnown RBP10.1□□□□□ -0.79
TMEM35A-202ENST00000478351 PRDM2Q13029 1718 aa10.1□□□□□ -0.79
TMEM35A-202ENST00000478351 POTEMA6NI47 508 aa10.09□□□□□ -0.79
TMEM35A-202ENST00000478351 POTEGQ6S5H5 508 aa10.08□□□□□ -0.8
TMEM35A-202ENST00000478351 CCDC88BA6NC98 1476 aa10.08□□□□□ -0.8
TMEM35A-202ENST00000478351 TBC1D12O60347 775 aa10.07□□□□□ -0.8
TMEM35A-202ENST00000478351 EMP3P54852 163 aa10.06□□□□□ -0.8
TMEM35A-202ENST00000478351 PCDHGA4Q9Y5G9 962 aa10.06□□□□□ -0.8
TMEM35A-202ENST00000478351 ARSIQ5FYB1 569 aa10.05□□□□□ -0.8
TMEM35A-202ENST00000478351 TSHZ2Q9NRE2 1034 aa10.05□□□□□ -0.8
TMEM35A-202ENST00000478351 OXER1Q8TDS5 423 aa10.04□□□□□ -0.8
TMEM35A-202ENST00000478351 IFT140Q96RY7 1462 aa10.04□□□□□ -0.8
TMEM35A-202ENST00000478351 CAMK2BQ13554 666 aa10.03□□□□□ -0.8
TMEM35A-202ENST00000478351 MARVELD3Q96A59 401 aa10.03□□□□□ -0.8
TMEM35A-202ENST00000478351 WDR70Q9NW82 654 aa10.03□□□□□ -0.8
TMEM35A-202ENST00000478351 ZNF608Q9ULD9 1512 aaPredicted RBP10.02□□□□□ -0.8
TMEM35A-202ENST00000478351 PCDH10Q9P2E7 1040 aa10.02□□□□□ -0.81
TMEM35A-202ENST00000478351 TOPBP1Q92547 1522 aa10.02□□□□□ -0.81
TMEM35A-202ENST00000478351 ABCC8Q09428 1581 aa10.01□□□□□ -0.81
TMEM35A-202ENST00000478351 ERBB3P21860 1342 aa9.99□□□□□ -0.81
TMEM35A-202ENST00000478351 KDM4FA0A1W2PPD8 638 aa9.98□□□□□ -0.81
TMEM35A-202ENST00000478351 NUDT7P0C024 238 aa9.98□□□□□ -0.81
TMEM35A-202ENST00000478351 KHSRPQ92945 711 aaKnown RBP eCLIP9.98□□□□□ -0.81
TMEM35A-202ENST00000478351 DNMBPQ6XZF7 1577 aa9.97□□□□□ -0.81
TMEM35A-202ENST00000478351 RIMBP3CA6NJZ7 1639 aa9.97□□□□□ -0.81
TMEM35A-202ENST00000478351 RIMBP3BA6NNM3 1639 aa9.97□□□□□ -0.81
TMEM35A-202ENST00000478351 RIMBP3Q9UFD9 1639 aa9.97□□□□□ -0.81
TMEM35A-202ENST00000478351 FAM205CA6NFA0 338 aa9.97□□□□□ -0.81
TMEM35A-202ENST00000478351 ZNF316A6NFI3 1004 aaPredicted RBP9.97□□□□□ -0.81
TMEM35A-202ENST00000478351 UPF1Q92900 1129 aaKnown RBP eCLIP9.97□□□□□ -0.81
TMEM35A-202ENST00000478351 HS3ST6Q96QI5 342 aa9.97□□□□□ -0.81
TMEM35A-202ENST00000478351 PSDA5PKW4 1024 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms