RNA–Protein interactions for RNA: ENST00000478089.1

FBXO42-204, Transcript of F-box protein 42, humanhuman

TSL 1 (best)

Gene FBXO42, Length 2,920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO42-204ENST00000478089 ZNF219Q9P2Y4 722 aaPredicted RBP11.08□□□□□ -0.63
FBXO42-204ENST00000478089 TMCO4Q5TGY1 634 aa11.08□□□□□ -0.64
FBXO42-204ENST00000478089 BRPF3Q9ULD4 1205 aa11.07□□□□□ -0.64
FBXO42-204ENST00000478089 CIZ1Q9ULV3 898 aaPredicted RBP11.07□□□□□ -0.64
FBXO42-204ENST00000478089 SYNJ1O43426 1573 aa11.06□□□□□ -0.64
FBXO42-204ENST00000478089 SOGA1O94964 1423 aa11.06□□□□□ -0.64
FBXO42-204ENST00000478089 TICAM2Q86XR7 235 aa11.05□□□□□ -0.64
FBXO42-204ENST00000478089 WDR62O43379 1518 aa11.05□□□□□ -0.64
FBXO42-204ENST00000478089 DEKP35659 375 aaKnown RBP11.05□□□□□ -0.64
FBXO42-204ENST00000478089 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.05□□□□□ -0.64
FBXO42-204ENST00000478089 ZMYND10O75800 440 aa11.03□□□□□ -0.64
FBXO42-204ENST00000478089 GLIPR1L2Q4G1C9 344 aa11.03□□□□□ -0.64
FBXO42-204ENST00000478089 GZF1Q9H116 711 aaPredicted RBP11.02□□□□□ -0.64
FBXO42-204ENST00000478089 RUSC2Q8N2Y8 1516 aa11.01□□□□□ -0.65
FBXO42-204ENST00000478089 ZNF592Q92610 1267 aa11.01□□□□□ -0.65
FBXO42-204ENST00000478089 TOP2BQ02880 1626 aa11□□□□□ -0.65
FBXO42-204ENST00000478089 USP35Q9P2H5 1018 aa11□□□□□ -0.65
FBXO42-204ENST00000478089 TNIKQ9UKE5 1360 aa11□□□□□ -0.65
FBXO42-204ENST00000478089 ZFP91Q96JP5 570 aaPredicted RBP11□□□□□ -0.65
FBXO42-204ENST00000478089 BIVM-ERCC5R4GMW8 1640 aa11□□□□□ -0.65
FBXO42-204ENST00000478089 WDR70Q9NW82 654 aa10.99□□□□□ -0.65
FBXO42-204ENST00000478089 ZNF692Q9BU19 519 aaPredicted RBP10.97□□□□□ -0.65
FBXO42-204ENST00000478089 CFTRP13569 1480 aa10.97□□□□□ -0.65
FBXO42-204ENST00000478089 GOLGA3Q08378 1498 aa10.97□□□□□ -0.65
FBXO42-204ENST00000478089 KIF21BO75037 1637 aa10.97□□□□□ -0.65
FBXO42-204ENST00000478089 FAM177A1Q8N128 213 aaPredicted RBP10.96□□□□□ -0.65
FBXO42-204ENST00000478089 CLUAP1Q96AJ1 413 aa10.96□□□□□ -0.66
FBXO42-204ENST00000478089 KDM4CQ9H3R0 1056 aa10.96□□□□□ -0.66
FBXO42-204ENST00000478089 E9PSI1 815 aa10.95□□□□□ -0.66
FBXO42-204ENST00000478089 CLSTN1O94985 981 aa10.95□□□□□ -0.66
FBXO42-204ENST00000478089 CEP162Q5TB80 1403 aa10.94□□□□□ -0.66
FBXO42-204ENST00000478089 TMED8Q6PL24 325 aaPredicted RBP10.94□□□□□ -0.66
FBXO42-204ENST00000478089 CADPS2Q86UW7 1296 aa10.94□□□□□ -0.66
FBXO42-204ENST00000478089 CEP164Q9UPV0 1460 aa10.94□□□□□ -0.66
FBXO42-204ENST00000478089 NCLP19338 710 aaKnown RBP10.94□□□□□ -0.66
FBXO42-204ENST00000478089 SEMA3EO15041 775 aa10.93□□□□□ -0.66
FBXO42-204ENST00000478089 NAP1L2Q9ULW6 460 aaPredicted RBP10.92□□□□□ -0.66
FBXO42-204ENST00000478089 PDS5BQ9NTI5 1447 aa10.92□□□□□ -0.66
FBXO42-204ENST00000478089 TRAK2O60296 914 aa10.91□□□□□ -0.66
FBXO42-204ENST00000478089 IRF5Q13568 498 aa10.91□□□□□ -0.66
FBXO42-204ENST00000478089 PPARGC1BQ86YN6 1023 aaKnown RBP10.91□□□□□ -0.66
FBXO42-204ENST00000478089 KIF21AQ7Z4S6 1674 aa10.91□□□□□ -0.66
FBXO42-204ENST00000478089 POLA2Q14181 598 aa10.91□□□□□ -0.66
FBXO42-204ENST00000478089 PLCD3Q8N3E9 789 aa10.9□□□□□ -0.66
FBXO42-204ENST00000478089 CUX1P39880 1505 aa10.89□□□□□ -0.67
FBXO42-204ENST00000478089 MYT1LQ9UL68 1186 aa10.89□□□□□ -0.67
FBXO42-204ENST00000478089 MRC2Q9UBG0 1479 aa10.89□□□□□ -0.67
FBXO42-204ENST00000478089 CHRM1P11229 460 aaPredicted RBP10.89□□□□□ -0.67
FBXO42-204ENST00000478089 PRDM10Q9NQV6 1147 aa10.89□□□□□ -0.67
FBXO42-204ENST00000478089 RETREG2Q8NC44 543 aa10.88□□□□□ -0.67
FBXO42-204ENST00000478089 PSMD1Q99460 953 aa10.88□□□□□ -0.67
FBXO42-204ENST00000478089 TEX2Q8IWB9 1127 aa10.88□□□□□ -0.67
FBXO42-204ENST00000478089 CNPY4Q8N129 248 aa10.88□□□□□ -0.67
FBXO42-204ENST00000478089 ONECUT3O60422 494 aaPredicted RBP10.87□□□□□ -0.67
FBXO42-204ENST00000478089 TESPA1A2RU30 521 aaPredicted RBP10.86□□□□□ -0.67
FBXO42-204ENST00000478089 BARGINQ6ZT62 677 aa10.86□□□□□ -0.67
FBXO42-204ENST00000478089 CADPSQ9ULU8 1353 aa10.86□□□□□ -0.67
FBXO42-204ENST00000478089 CERS3Q8IU89 383 aa10.85□□□□□ -0.67
FBXO42-204ENST00000478089 ERICH3Q5RHP9 1530 aa10.84□□□□□ -0.67
FBXO42-204ENST00000478089 NEUROD1Q13562 356 aa10.84□□□□□ -0.67
FBXO42-204ENST00000478089 STK25O00506 426 aa10.83□□□□□ -0.68
FBXO42-204ENST00000478089 RAPGEF2Q9Y4G8 1499 aa10.82□□□□□ -0.68
FBXO42-204ENST00000478089 IPO4Q8TEX9 1081 aaKnown RBP10.82□□□□□ -0.68
FBXO42-204ENST00000478089 FAM117AQ9C073 453 aa10.82□□□□□ -0.68
FBXO42-204ENST00000478089 CWC22Q9HCG8 908 aaKnown RBP10.82□□□□□ -0.68
FBXO42-204ENST00000478089 PRXQ9BXM0 1461 aa10.82□□□□□ -0.68
FBXO42-204ENST00000478089 SECISBP2LQ93073 1101 aaKnown RBP10.81□□□□□ -0.68
FBXO42-204ENST00000478089 FLIIQ13045 1269 aa10.81□□□□□ -0.68
FBXO42-204ENST00000478089 A6NJR5 290 aa10.81□□□□□ -0.68
FBXO42-204ENST00000478089 AK7Q96M32 723 aa10.81□□□□□ -0.68
FBXO42-204ENST00000478089 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.8□□□□□ -0.68
FBXO42-204ENST00000478089 HNRNPUL2Q1KMD3 747 aaKnown RBP10.8□□□□□ -0.68
FBXO42-204ENST00000478089 FBXW7Q969H0 707 aa10.8□□□□□ -0.68
FBXO42-204ENST00000478089 ZNF777Q9ULD5 760 aaPredicted RBP10.8□□□□□ -0.68
FBXO42-204ENST00000478089 KIF27Q86VH2 1401 aa10.8□□□□□ -0.68
FBXO42-204ENST00000478089 DMRT2Q9Y5R5 561 aa10.79□□□□□ -0.68
FBXO42-204ENST00000478089 PRDM16Q9HAZ2 1276 aa10.79□□□□□ -0.68
FBXO42-204ENST00000478089 U3KPZ7 1027 aaPredicted RBP10.79□□□□□ -0.68
FBXO42-204ENST00000478089 CLIP1P30622 1438 aa10.79□□□□□ -0.68
FBXO42-204ENST00000478089 ERCC6Q03468 1493 aa10.79□□□□□ -0.68
FBXO42-204ENST00000478089 CC2D2BQ6DHV5 1058 aa10.77□□□□□ -0.69
FBXO42-204ENST00000478089 ZNF316A6NFI3 1004 aaPredicted RBP10.76□□□□□ -0.69
FBXO42-204ENST00000478089 MIER1Q8N108 512 aa10.76□□□□□ -0.69
FBXO42-204ENST00000478089 PLCD4Q9BRC7 762 aa10.76□□□□□ -0.69
FBXO42-204ENST00000478089 PPM1GO15355 546 aaPredicted RBP10.75□□□□□ -0.69
FBXO42-204ENST00000478089 ARHGEF1Q92888 912 aaKnown RBP10.75□□□□□ -0.69
FBXO42-204ENST00000478089 VPS8Q8N3P4 1428 aa10.75□□□□□ -0.69
FBXO42-204ENST00000478089 PLEKHG3A1L390 1219 aa10.75□□□□□ -0.69
FBXO42-204ENST00000478089 CHMP4BQ9H444 224 aaKnown RBP10.74□□□□□ -0.69
FBXO42-204ENST00000478089 RIOK3O14730 519 aaKnown RBP10.74□□□□□ -0.69
FBXO42-204ENST00000478089 PDE4DQ08499 809 aa10.74□□□□□ -0.69
FBXO42-204ENST00000478089 FANCD2Q9BXW9 1451 aa10.73□□□□□ -0.69
FBXO42-204ENST00000478089 FGD5Q6ZNL6 1462 aa10.72□□□□□ -0.69
FBXO42-204ENST00000478089 KCNG1Q9UIX4 513 aa10.72□□□□□ -0.69
FBXO42-204ENST00000478089 GRIPAP1Q4V328 841 aa10.71□□□□□ -0.69
FBXO42-204ENST00000478089 WWC1Q8IX03 1113 aa10.71□□□□□ -0.69
FBXO42-204ENST00000478089 FTSJ3Q8IY81 847 aaKnown RBP10.71□□□□□ -0.69
FBXO42-204ENST00000478089 TRIM66O15016 1216 aa10.71□□□□□ -0.69
FBXO42-204ENST00000478089 ZNF526Q8TF50 670 aaPredicted RBP10.71□□□□□ -0.69
FBXO42-204ENST00000478089 DNMBPQ6XZF7 1577 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms