RNA–Protein interactions for RNA: ENST00000477607.6

P4HB-211, Transcript of prolyl 4-hydroxylase subunit beta, humanhuman

TSL 1 (best)

Gene P4HB, Length 1,110 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
P4HB-211ENST00000477607 PREX1Q8TCU6 1659 aa25.87■■□□□ 1.73
P4HB-211ENST00000477607 MLECQ14165 292 aa25.84■■□□□ 1.73
P4HB-211ENST00000477607 SCAPERQ9BY12 1400 aa25.84■■□□□ 1.73
P4HB-211ENST00000477607 ARHGEF12Q9NZN5 1544 aa25.83■■□□□ 1.73
P4HB-211ENST00000477607 PLCH2O75038 1416 aa25.83■■□□□ 1.73
P4HB-211ENST00000477607 KIF14Q15058 1648 aa25.8■■□□□ 1.72
P4HB-211ENST00000477607 C9orf84Q5VXU9 1444 aa25.8■■□□□ 1.72
P4HB-211ENST00000477607 ATP10AO60312 1499 aa25.78■■□□□ 1.72
P4HB-211ENST00000477607 CERKQ8TCT0 537 aa25.75■■□□□ 1.71
P4HB-211ENST00000477607 LRRIQ1Q96JM4 1722 aa25.74■■□□□ 1.71
P4HB-211ENST00000477607 STRCQ7RTU9 1775 aa25.74■■□□□ 1.71
P4HB-211ENST00000477607 KDM5CP41229 1560 aa25.73■■□□□ 1.71
P4HB-211ENST00000477607 ZNF518AQ6AHZ1 1483 aa25.71■■□□□ 1.71
P4HB-211ENST00000477607 FMN1Q68DA7 1419 aa25.7■■□□□ 1.7
P4HB-211ENST00000477607 ARHGAP5Q13017 1502 aa25.69■■□□□ 1.7
P4HB-211ENST00000477607 DIP2CQ9Y2E4 1556 aa25.69■■□□□ 1.7
P4HB-211ENST00000477607 CDC42BPBQ9Y5S2 1711 aa25.68■■□□□ 1.7
P4HB-211ENST00000477607 EFCAB2Q5VUJ9 269 aa25.67■■□□□ 1.7
P4HB-211ENST00000477607 ABCA6Q8N139 1617 aa25.66■■□□□ 1.7
P4HB-211ENST00000477607 ARHGAP35Q9NRY4 1499 aa25.66■■□□□ 1.7
P4HB-211ENST00000477607 ATP1B4Q9UN42 357 aaPredicted RBP25.66■■□□□ 1.7
P4HB-211ENST00000477607 C3P01024 1663 aa25.65■■□□□ 1.7
P4HB-211ENST00000477607 CEBPAP49715 358 aaPredicted RBP25.65■■□□□ 1.7
P4HB-211ENST00000477607 SETD1BQ9UPS6 1966 aaKnown RBP25.65■■□□□ 1.7
P4HB-211ENST00000477607 REREQ9P2R6 1566 aa25.64■■□□□ 1.69
P4HB-211ENST00000477607 TROQ12816 1431 aaPredicted RBP25.63■■□□□ 1.69
P4HB-211ENST00000477607 UHRF1BP1Q6BDS2 1440 aa25.62■■□□□ 1.69
P4HB-211ENST00000477607 EHMT2Q96KQ7 1210 aa25.61■■□□□ 1.69
P4HB-211ENST00000477607 PREX2Q70Z35 1606 aa25.61■■□□□ 1.69
P4HB-211ENST00000477607 ITSN2Q9NZM3 1697 aa25.6■■□□□ 1.69
P4HB-211ENST00000477607 CDK11AQ9UQ88 783 aaPredicted RBP25.59■■□□□ 1.69
P4HB-211ENST00000477607 CLIP1P30622 1438 aa25.59■■□□□ 1.69
P4HB-211ENST00000477607 UBTFP17480 764 aaKnown RBP25.57■■□□□ 1.68
P4HB-211ENST00000477607 AFAP1Q8N556 730 aa25.57■■□□□ 1.68
P4HB-211ENST00000477607 ABCC1P33527 1531 aa25.56■■□□□ 1.68
P4HB-211ENST00000477607 MYT1LQ9UL68 1186 aa25.54■■□□□ 1.68
P4HB-211ENST00000477607 MLH3Q9UHC1 1453 aa25.53■■□□□ 1.68
P4HB-211ENST00000477607 CDC42BPAQ5VT25 1732 aa25.52■■□□□ 1.68
P4HB-211ENST00000477607 KIDINS220Q9ULH0 1771 aa25.52■■□□□ 1.68
P4HB-211ENST00000477607 AGLP35573 1532 aa25.52■■□□□ 1.68
P4HB-211ENST00000477607 DMRT2Q9Y5R5 561 aa25.51■■□□□ 1.67
P4HB-211ENST00000477607 TRAPPC8Q9Y2L5 1435 aa25.48■■□□□ 1.67
P4HB-211ENST00000477607 DISP3Q9P2K9 1392 aa25.47■■□□□ 1.67
P4HB-211ENST00000477607 PTPRTO14522 1441 aa25.46■■□□□ 1.67
P4HB-211ENST00000477607 SPATA31D1Q6ZQQ2 1576 aa25.45■■□□□ 1.66
P4HB-211ENST00000477607 CCDC18Q5T9S5 1454 aa25.44■■□□□ 1.66
P4HB-211ENST00000477607 MROH2AA6NES4 1674 aa25.44■■□□□ 1.66
P4HB-211ENST00000477607 LTBP4Q8N2S1 1624 aa25.43■■□□□ 1.66
P4HB-211ENST00000477607 ILDR2Q71H61 639 aa25.41■■□□□ 1.66
P4HB-211ENST00000477607 ESF1Q9H501 851 aaKnown RBP25.4■■□□□ 1.66
P4HB-211ENST00000477607 SAMD9LQ8IVG5 1584 aa25.39■■□□□ 1.66
P4HB-211ENST00000477607 SUPT6HQ7KZ85 1726 aaKnown RBP25.39■■□□□ 1.65
P4HB-211ENST00000477607 NCOA1Q15788 1441 aa25.38■■□□□ 1.65
P4HB-211ENST00000477607 CASKIN1Q8WXD9 1431 aa25.38■■□□□ 1.65
P4HB-211ENST00000477607 CNTLNQ9NXG0 1405 aa25.38■■□□□ 1.65
P4HB-211ENST00000477607 CAMSAP1Q5T5Y3 1602 aa25.36■■□□□ 1.65
P4HB-211ENST00000477607 SYCP2Q9BX26 1530 aa25.36■■□□□ 1.65
P4HB-211ENST00000477607 IQSEC2Q5JU85 1478 aa25.34■■□□□ 1.65
P4HB-211ENST00000477607 CLTCQ00610 1675 aaKnown RBP25.34■■□□□ 1.65
P4HB-211ENST00000477607 ZNF142P52746 1687 aaPredicted RBP25.33■■□□□ 1.65
P4HB-211ENST00000477607 MYO3AQ8NEV4 1616 aa25.32■■□□□ 1.64
P4HB-211ENST00000477607 NPATQ14207 1427 aa25.3■■□□□ 1.64
P4HB-211ENST00000477607 FYCO1Q9BQS8 1478 aa25.3■■□□□ 1.64
P4HB-211ENST00000477607 SOCS7O14512 581 aa25.3■■□□□ 1.64
P4HB-211ENST00000477607 INO80Q9ULG1 1556 aaPredicted RBP25.3■■□□□ 1.64
P4HB-211ENST00000477607 ATP7AQ04656 1500 aa25.28■■□□□ 1.64
P4HB-211ENST00000477607 PLXNC1O60486 1568 aa25.28■■□□□ 1.64
P4HB-211ENST00000477607 GPATCH8Q9UKJ3 1502 aaKnown RBP25.24■■□□□ 1.63
P4HB-211ENST00000477607 ZNF777Q9ULD5 760 aaPredicted RBP25.24■■□□□ 1.63
P4HB-211ENST00000477607 CEP170BQ9Y4F5 1589 aaPredicted RBP25.23■■□□□ 1.63
P4HB-211ENST00000477607 ZMYM3Q14202 1370 aa25.23■■□□□ 1.63
P4HB-211ENST00000477607 SPAG9O60271 1321 aaKnown RBP25.21■■□□□ 1.63
P4HB-211ENST00000477607 CHIC1Q5VXU3 224 aa25.21■■□□□ 1.63
P4HB-211ENST00000477607 ADGBQ8N7X0 1667 aa25.2■■□□□ 1.63
P4HB-211ENST00000477607 A2MP01023 1474 aa25.18■■□□□ 1.62
P4HB-211ENST00000477607 PLA2R1Q13018 1463 aa25.18■■□□□ 1.62
P4HB-211ENST00000477607 NCKAP5LQ9HCH0 1330 aa25.17■■□□□ 1.62
P4HB-211ENST00000477607 HNRNPMP52272 730 aaKnown RBP eCLIP25.17■■□□□ 1.62
P4HB-211ENST00000477607 ZNF335Q9H4Z2 1342 aaPredicted RBP25.16■■□□□ 1.62
P4HB-211ENST00000477607 PLEKHH2Q8IVE3 1493 aa25.16■■□□□ 1.62
P4HB-211ENST00000477607 PTPRKQ15262 1439 aa25.15■■□□□ 1.62
P4HB-211ENST00000477607 KIAA1107Q9UPP5 1409 aa25.15■■□□□ 1.62
P4HB-211ENST00000477607 TCOF1Q13428 1488 aaKnown RBP25.15■■□□□ 1.62
P4HB-211ENST00000477607 POLR1AO95602 1720 aaPredicted RBP25.12■■□□□ 1.61
P4HB-211ENST00000477607 CCNB3Q8WWL7 1395 aa25.09■■□□□ 1.61
P4HB-211ENST00000477607 CFDP1Q9UEE9 299 aaPredicted RBP25.09■■□□□ 1.61
P4HB-211ENST00000477607 TIAM1Q13009 1591 aa25.09■■□□□ 1.61
P4HB-211ENST00000477607 PKD2Q13563 968 aa25.08■■□□□ 1.61
P4HB-211ENST00000477607 DNMT1P26358 1616 aaKnown RBP25.08■■□□□ 1.6
P4HB-211ENST00000477607 UBAP1LF5GYI3 381 aa25.07■■□□□ 1.6
P4HB-211ENST00000477607 GGT6Q6P531 493 aa25.07■■□□□ 1.6
P4HB-211ENST00000477607 A2ML1A8K2U0 1454 aa25.04■■□□□ 1.6
P4HB-211ENST00000477607 MTUS2Q5JR59 1369 aa25.03■■□□□ 1.6
P4HB-211ENST00000477607 EHBP1L1Q8N3D4 1523 aa25.02■■□□□ 1.6
P4HB-211ENST00000477607 NEURL4Q96JN8 1562 aa25.01■■□□□ 1.59
P4HB-211ENST00000477607 PPP6R1Q9UPN7 881 aa25■■□□□ 1.59
P4HB-211ENST00000477607 MBD5Q9P267 1494 aa24.99■■□□□ 1.59
P4HB-211ENST00000477607 ZNF644Q9H582 1327 aaPredicted RBP24.97■■□□□ 1.59
P4HB-211ENST00000477607 KDM5DQ9BY66 1539 aa24.96■■□□□ 1.59
P4HB-211ENST00000477607 RTEL1-TNFRSF6BF6WH68 1400 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms