RNA–Protein interactions for RNA: ENST00000477563.6

RBBP4-211, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 5

Gene RBBP4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-211ENST00000477563 RIMS1Q86UR5 1692 aaKnown RBP13□□□□□ -0.33
RBBP4-211ENST00000477563 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.99□□□□□ -0.33
RBBP4-211ENST00000477563 AKNAQ7Z591 1439 aa12.99□□□□□ -0.33
RBBP4-211ENST00000477563 SIGLEC1Q9BZZ2 1709 aa12.98□□□□□ -0.33
RBBP4-211ENST00000477563 FANCAO15360 1455 aa12.97□□□□□ -0.33
RBBP4-211ENST00000477563 MAGI2Q86UL8 1455 aa12.97□□□□□ -0.33
RBBP4-211ENST00000477563 EEA1Q15075 1411 aa12.97□□□□□ -0.33
RBBP4-211ENST00000477563 PLEKHD1A6NEE1 506 aa12.96□□□□□ -0.33
RBBP4-211ENST00000477563 EFCAB5A4FU69 1503 aa12.96□□□□□ -0.33
RBBP4-211ENST00000477563 TTC37Q6PGP7 1564 aa12.95□□□□□ -0.34
RBBP4-211ENST00000477563 ARID4BQ4LE39 1312 aaPredicted RBP12.95□□□□□ -0.34
RBBP4-211ENST00000477563 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.95□□□□□ -0.34
RBBP4-211ENST00000477563 HNRNPUL2Q1KMD3 747 aaKnown RBP12.95□□□□□ -0.34
RBBP4-211ENST00000477563 POGZQ7Z3K3 1410 aa12.95□□□□□ -0.34
RBBP4-211ENST00000477563 ZFYVE16Q7Z3T8 1539 aa12.93□□□□□ -0.34
RBBP4-211ENST00000477563 HECW1Q76N89 1606 aa12.92□□□□□ -0.34
RBBP4-211ENST00000477563 FER1L4A9Z1Z3 1794 aa12.92□□□□□ -0.34
RBBP4-211ENST00000477563 YEATS2Q9ULM3 1422 aa12.91□□□□□ -0.34
RBBP4-211ENST00000477563 PLCH2O75038 1416 aa12.9□□□□□ -0.34
RBBP4-211ENST00000477563 ARHGEF12Q9NZN5 1544 aa12.89□□□□□ -0.35
RBBP4-211ENST00000477563 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.88□□□□□ -0.354e-8■■■■□ 20.6
RBBP4-211ENST00000477563 PREX1Q8TCU6 1659 aa12.88□□□□□ -0.35
RBBP4-211ENST00000477563 C1QBPQ07021 282 aaKnown RBP12.87□□□□□ -0.35
RBBP4-211ENST00000477563 MYO5CQ9NQX4 1742 aa12.87□□□□□ -0.35
RBBP4-211ENST00000477563 SCAPERQ9BY12 1400 aa12.87□□□□□ -0.35
RBBP4-211ENST00000477563 ATP10AO60312 1499 aa12.86□□□□□ -0.35
RBBP4-211ENST00000477563 HSPA2P54652 639 aa12.86□□□□□ -0.35
RBBP4-211ENST00000477563 CDK13Q14004 1512 aaKnown RBP12.86□□□□□ -0.35
RBBP4-211ENST00000477563 CERKQ8TCT0 537 aa12.85□□□□□ -0.35
RBBP4-211ENST00000477563 C9orf84Q5VXU9 1444 aa12.85□□□□□ -0.35
RBBP4-211ENST00000477563 SETD1BQ9UPS6 1966 aaKnown RBP12.85□□□□□ -0.35
RBBP4-211ENST00000477563 STRCQ7RTU9 1775 aa12.84□□□□□ -0.35
RBBP4-211ENST00000477563 KDM5CP41229 1560 aa12.83□□□□□ -0.36
RBBP4-211ENST00000477563 REREQ9P2R6 1566 aa12.82□□□□□ -0.36
RBBP4-211ENST00000477563 FMN1Q68DA7 1419 aa12.81□□□□□ -0.36
RBBP4-211ENST00000477563 ZNF518AQ6AHZ1 1483 aa12.81□□□□□ -0.36
RBBP4-211ENST00000477563 RANGAP1P46060 587 aaPredicted RBP12.81□□□□□ -0.36
RBBP4-211ENST00000477563 EFCAB2Q5VUJ9 269 aa12.8□□□□□ -0.36
RBBP4-211ENST00000477563 KIF14Q15058 1648 aa12.8□□□□□ -0.36
RBBP4-211ENST00000477563 LRRIQ1Q96JM4 1722 aa12.79□□□□□ -0.36
RBBP4-211ENST00000477563 MLECQ14165 292 aa12.78□□□□□ -0.36
RBBP4-211ENST00000477563 CDC42BPBQ9Y5S2 1711 aa12.78□□□□□ -0.36
RBBP4-211ENST00000477563 ARHGAP35Q9NRY4 1499 aa12.78□□□□□ -0.36
RBBP4-211ENST00000477563 DIP2CQ9Y2E4 1556 aa12.77□□□□□ -0.36
RBBP4-211ENST00000477563 CDK11AQ9UQ88 783 aaPredicted RBP12.77□□□□□ -0.37
RBBP4-211ENST00000477563 TROQ12816 1431 aaPredicted RBP12.77□□□□□ -0.37
RBBP4-211ENST00000477563 MLH3Q9UHC1 1453 aa12.77□□□□□ -0.37
RBBP4-211ENST00000477563 C3P01024 1663 aa12.77□□□□□ -0.37
RBBP4-211ENST00000477563 AGLP35573 1532 aa12.76□□□□□ -0.37
RBBP4-211ENST00000477563 UHRF1BP1Q6BDS2 1440 aa12.75□□□□□ -0.37
RBBP4-211ENST00000477563 ABCA6Q8N139 1617 aa12.74□□□□□ -0.37
RBBP4-211ENST00000477563 ARHGAP5Q13017 1502 aa12.74□□□□□ -0.37
RBBP4-211ENST00000477563 PTPRTO14522 1441 aa12.74□□□□□ -0.37
RBBP4-211ENST00000477563 CEBPAP49715 358 aaPredicted RBP12.74□□□□□ -0.37
RBBP4-211ENST00000477563 AFAP1Q8N556 730 aa12.74□□□□□ -0.37
RBBP4-211ENST00000477563 PREX2Q70Z35 1606 aa12.73□□□□□ -0.37
RBBP4-211ENST00000477563 CLIP1P30622 1438 aa12.72□□□□□ -0.37
RBBP4-211ENST00000477563 ITSN2Q9NZM3 1697 aa12.72□□□□□ -0.37
RBBP4-211ENST00000477563 ABCC1P33527 1531 aa12.72□□□□□ -0.37
RBBP4-211ENST00000477563 KIDINS220Q9ULH0 1771 aa12.71□□□□□ -0.38
RBBP4-211ENST00000477563 IQSEC2Q5JU85 1478 aa12.71□□□□□ -0.38
RBBP4-211ENST00000477563 TRAPPC8Q9Y2L5 1435 aa12.7□□□□□ -0.38
RBBP4-211ENST00000477563 LTBP4Q8N2S1 1624 aa12.7□□□□□ -0.38
RBBP4-211ENST00000477563 MROH2AA6NES4 1674 aa12.69□□□□□ -0.38
RBBP4-211ENST00000477563 CDC42BPAQ5VT25 1732 aa12.68□□□□□ -0.38
RBBP4-211ENST00000477563 CNTLNQ9NXG0 1405 aa12.68□□□□□ -0.38
RBBP4-211ENST00000477563 CCDC18Q5T9S5 1454 aa12.67□□□□□ -0.38
RBBP4-211ENST00000477563 UBTFP17480 764 aaKnown RBP12.67□□□□□ -0.38
RBBP4-211ENST00000477563 ATP1B4Q9UN42 357 aaPredicted RBP12.67□□□□□ -0.38
RBBP4-211ENST00000477563 NCOA1Q15788 1441 aa12.66□□□□□ -0.38
RBBP4-211ENST00000477563 NPATQ14207 1427 aa12.65□□□□□ -0.38
RBBP4-211ENST00000477563 CASKIN1Q8WXD9 1431 aa12.65□□□□□ -0.38
RBBP4-211ENST00000477563 ILDR2Q71H61 639 aa12.65□□□□□ -0.38
RBBP4-211ENST00000477563 SOCS7O14512 581 aa12.64□□□□□ -0.39
RBBP4-211ENST00000477563 DISP3Q9P2K9 1392 aa12.64□□□□□ -0.39
RBBP4-211ENST00000477563 SAMD9LQ8IVG5 1584 aa12.64□□□□□ -0.39
RBBP4-211ENST00000477563 U3KPZ7 1027 aaPredicted RBP12.63□□□□□ -0.39
RBBP4-211ENST00000477563 SPATA31D1Q6ZQQ2 1576 aa12.62□□□□□ -0.39
RBBP4-211ENST00000477563 MYT1LQ9UL68 1186 aa12.62□□□□□ -0.39
RBBP4-211ENST00000477563 ZNF142P52746 1687 aaPredicted RBP12.61□□□□□ -0.39
RBBP4-211ENST00000477563 SLC4A2P04920 1241 aa12.61□□□□□ -0.39
RBBP4-211ENST00000477563 ESF1Q9H501 851 aaKnown RBP12.61□□□□□ -0.39
RBBP4-211ENST00000477563 CAMSAP1Q5T5Y3 1602 aa12.61□□□□□ -0.39
RBBP4-211ENST00000477563 PLXNC1O60486 1568 aa12.6□□□□□ -0.39
RBBP4-211ENST00000477563 FYCO1Q9BQS8 1478 aa12.59□□□□□ -0.39
RBBP4-211ENST00000477563 ZMYM3Q14202 1370 aa12.59□□□□□ -0.39
RBBP4-211ENST00000477563 GPATCH8Q9UKJ3 1502 aaKnown RBP12.59□□□□□ -0.39
RBBP4-211ENST00000477563 KIAA1107Q9UPP5 1409 aa12.59□□□□□ -0.39
RBBP4-211ENST00000477563 INO80Q9ULG1 1556 aaPredicted RBP12.59□□□□□ -0.39
RBBP4-211ENST00000477563 SUPT6HQ7KZ85 1726 aaKnown RBP12.59□□□□□ -0.39
RBBP4-211ENST00000477563 PLA2R1Q13018 1463 aa12.59□□□□□ -0.39
RBBP4-211ENST00000477563 MYO3AQ8NEV4 1616 aa12.58□□□□□ -0.4
RBBP4-211ENST00000477563 CLTCQ00610 1675 aaKnown RBP12.57□□□□□ -0.4
RBBP4-211ENST00000477563 SYCP2Q9BX26 1530 aa12.57□□□□□ -0.4
RBBP4-211ENST00000477563 ATP7AQ04656 1500 aa12.57□□□□□ -0.4
RBBP4-211ENST00000477563 TCOF1Q13428 1488 aaKnown RBP12.56□□□□□ -0.4
RBBP4-211ENST00000477563 PLEKHH2Q8IVE3 1493 aa12.56□□□□□ -0.4
RBBP4-211ENST00000477563 EHMT2Q96KQ7 1210 aa12.55□□□□□ -0.4
RBBP4-211ENST00000477563 SPAG9O60271 1321 aaKnown RBP12.55□□□□□ -0.4
RBBP4-211ENST00000477563 CEP170BQ9Y4F5 1589 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms