RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 RYDENQ9NUL5 291 aaKnown RBP10.75□□□□□ -0.69
VPS45-207ENST00000477558 ST18O60284 1047 aa10.74□□□□□ -0.69
VPS45-207ENST00000477558 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.73□□□□□ -0.691e-7■■■■■ 29.6
VPS45-207ENST00000477558 ILDR1Q86SU0 546 aaPredicted RBP10.71□□□□□ -0.69
VPS45-207ENST00000477558 DPY19L2Q6NUT2 758 aa10.69□□□□□ -0.7
VPS45-207ENST00000477558 MYO15BQ96JP2 1530 aa10.67□□□□□ -0.7
VPS45-207ENST00000477558 ZCCHC6Q5VYS8 1495 aaKnown RBP10.67□□□□□ -0.7
VPS45-207ENST00000477558 PDCD7Q8N8D1 485 aaKnown RBP10.67□□□□□ -0.7
VPS45-207ENST00000477558 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.67□□□□□ -0.7
VPS45-207ENST00000477558 KDM2AQ9Y2K7 1162 aa10.66□□□□□ -0.7
VPS45-207ENST00000477558 SNPHO15079 494 aa10.65□□□□□ -0.7
VPS45-207ENST00000477558 TMEM121BQ9BXQ6 578 aaPredicted RBP10.65□□□□□ -0.7
VPS45-207ENST00000477558 NACADO15069 1562 aa10.63□□□□□ -0.71
VPS45-207ENST00000477558 CADPS2Q86UW7 1296 aa10.63□□□□□ -0.71
VPS45-207ENST00000477558 VSIG10Q8N0Z9 540 aa10.63□□□□□ -0.71
VPS45-207ENST00000477558 DCAF1Q9Y4B6 1507 aa10.62□□□□□ -0.71
VPS45-207ENST00000477558 RB1CC1Q8TDY2 1594 aa10.6□□□□□ -0.71
VPS45-207ENST00000477558 L3MBTL3Q96JM7 780 aaPredicted RBP10.57□□□□□ -0.72
VPS45-207ENST00000477558 C3orf67Q6ZVT6 689 aa10.56□□□□□ -0.72
VPS45-207ENST00000477558 MICALL2Q8IY33 904 aa10.54□□□□□ -0.72
VPS45-207ENST00000477558 BOLA1Q9Y3E2 137 aa10.53□□□□□ -0.72
VPS45-207ENST00000477558 MARVELD3Q96A59 401 aa10.51□□□□□ -0.73
VPS45-207ENST00000477558 G3V3G9 751 aa10.5□□□□□ -0.73
VPS45-207ENST00000477558 SPNS2Q8IVW8 549 aa10.5□□□□□ -0.73
VPS45-207ENST00000477558 NCKAP5LQ9HCH0 1330 aa10.49□□□□□ -0.73
VPS45-207ENST00000477558 MMRN1Q13201 1228 aa10.49□□□□□ -0.73
VPS45-207ENST00000477558 EMP3P54852 163 aa10.46□□□□□ -0.74
VPS45-207ENST00000477558 LARP6Q9BRS8 491 aaKnown RBP10.46□□□□□ -0.74
VPS45-207ENST00000477558 CRISPLD2Q9H0B8 497 aa10.45□□□□□ -0.74
VPS45-207ENST00000477558 UNC13AQ9UPW8 1703 aa10.44□□□□□ -0.74
VPS45-207ENST00000477558 PDE4AP27815 886 aa10.44□□□□□ -0.74
VPS45-207ENST00000477558 TMEM92Q6UXU6 159 aa10.42□□□□□ -0.74
VPS45-207ENST00000477558 WDR70Q9NW82 654 aa10.42□□□□□ -0.74
VPS45-207ENST00000477558 GPHNQ9NQX3 736 aaPredicted RBP10.41□□□□□ -0.74
VPS45-207ENST00000477558 C2orf72A6NCS6 295 aa10.38□□□□□ -0.75
VPS45-207ENST00000477558 MFSD10Q14728 455 aa10.38□□□□□ -0.75
VPS45-207ENST00000477558 HS3ST6Q96QI5 342 aa10.38□□□□□ -0.75
VPS45-207ENST00000477558 KIF3CO14782 793 aa10.37□□□□□ -0.75
VPS45-207ENST00000477558 TMC2Q8TDI7 906 aa10.37□□□□□ -0.75
VPS45-207ENST00000477558 DDX27Q96GQ7 796 aaKnown RBP10.37□□□□□ -0.75
VPS45-207ENST00000477558 FAM205CA6NFA0 338 aa10.36□□□□□ -0.75
VPS45-207ENST00000477558 DSG2Q14126 1118 aa10.36□□□□□ -0.75
VPS45-207ENST00000477558 POTEB3A0JP26 581 aa10.35□□□□□ -0.75
VPS45-207ENST00000477558 POTEBQ6S5H4 581 aa10.35□□□□□ -0.75
VPS45-207ENST00000477558 KRTAP3-3Q9BYR6 98 aa10.34□□□□□ -0.75
VPS45-207ENST00000477558 KRTAP3-2Q9BYR7 98 aa10.34□□□□□ -0.75
VPS45-207ENST00000477558 BICRAQ9NZM4 1560 aa10.34□□□□□ -0.75
VPS45-207ENST00000477558 PPP1R15BQ5SWA1 713 aa10.33□□□□□ -0.76
VPS45-207ENST00000477558 FOXK1P85037 733 aa10.33□□□□□ -0.76
VPS45-207ENST00000477558 E2F4Q16254 413 aa10.33□□□□□ -0.76
VPS45-207ENST00000477558 KCNV2Q8TDN2 545 aa10.33□□□□□ -0.76
VPS45-207ENST00000477558 HOXB3P14651 431 aaPredicted RBP10.32□□□□□ -0.76
VPS45-207ENST00000477558 PLPP6Q8IY26 295 aa10.31□□□□□ -0.76
VPS45-207ENST00000477558 SHROOM4Q9ULL8 1493 aa10.29□□□□□ -0.76
VPS45-207ENST00000477558 ZNF710Q8N1W2 664 aa10.28□□□□□ -0.76
VPS45-207ENST00000477558 SCRIBQ14160 1630 aa10.28□□□□□ -0.76
VPS45-207ENST00000477558 HOXB1P14653 301 aaPredicted RBP10.27□□□□□ -0.77
VPS45-207ENST00000477558 CAMK2BQ13554 666 aa10.27□□□□□ -0.77
VPS45-207ENST00000477558 DOK7Q18PE1 504 aa10.27□□□□□ -0.77
VPS45-207ENST00000477558 P3H3Q8IVL6 736 aa10.25□□□□□ -0.77
VPS45-207ENST00000477558 EMILIN3Q9NT22 766 aa10.25□□□□□ -0.77
VPS45-207ENST00000477558 BCANQ96GW7 911 aa10.24□□□□□ -0.77
VPS45-207ENST00000477558 RIMBP2O15034 1052 aa10.22□□□□□ -0.77
VPS45-207ENST00000477558 ARHGEF1Q92888 912 aaKnown RBP10.22□□□□□ -0.77
VPS45-207ENST00000477558 ERBB3P21860 1342 aa10.21□□□□□ -0.77
VPS45-207ENST00000477558 UPF1Q92900 1129 aaKnown RBP eCLIP10.19□□□□□ -0.78
VPS45-207ENST00000477558 DPYSL4O14531 572 aa10.18□□□□□ -0.78
VPS45-207ENST00000477558 NBR1Q14596 966 aa10.18□□□□□ -0.78
VPS45-207ENST00000477558 ARIH1Q9Y4X5 557 aaPredicted RBP10.17□□□□□ -0.78
VPS45-207ENST00000477558 OXER1Q8TDS5 423 aa10.16□□□□□ -0.78
VPS45-207ENST00000477558 ZSWIM6Q9HCJ5 1215 aa10.16□□□□□ -0.78
VPS45-207ENST00000477558 MAP3K9P80192 1104 aa10.15□□□□□ -0.79
VPS45-207ENST00000477558 SEMA3EO15041 775 aa10.14□□□□□ -0.79
VPS45-207ENST00000477558 SLC34A2O95436 690 aa10.14□□□□□ -0.79
VPS45-207ENST00000477558 VARS2Q5ST30 1063 aaKnown RBP10.14□□□□□ -0.79
VPS45-207ENST00000477558 PTCD2Q8WV60 388 aaKnown RBP10.13□□□□□ -0.79
VPS45-207ENST00000477558 RNF166Q96A37 237 aaPredicted RBP10.09□□□□□ -0.79
VPS45-207ENST00000477558 PCDHGA4Q9Y5G9 962 aa10.09□□□□□ -0.79
VPS45-207ENST00000477558 GPR153Q6NV75 609 aa10.08□□□□□ -0.8
VPS45-207ENST00000477558 ZNF687Q8N1G0 1237 aa10.08□□□□□ -0.8
VPS45-207ENST00000477558 PDIA6Q15084 440 aa10.07□□□□□ -0.8
VPS45-207ENST00000477558 KHSRPQ92945 711 aaKnown RBP eCLIP10.07□□□□□ -0.8
VPS45-207ENST00000477558 TESPA1A2RU30 521 aaPredicted RBP10.07□□□□□ -0.8
VPS45-207ENST00000477558 SPDYE16A6NNV3 312 aaPredicted RBP10.07□□□□□ -0.8
VPS45-207ENST00000477558 TBC1D12O60347 775 aa10.07□□□□□ -0.8
VPS45-207ENST00000477558 MLLT3P42568 568 aaPredicted RBP10.07□□□□□ -0.8
VPS45-207ENST00000477558 EVI5O60447 810 aa10.06□□□□□ -0.8
VPS45-207ENST00000477558 ARSIQ5FYB1 569 aa10.06□□□□□ -0.8
VPS45-207ENST00000477558 MYT1LQ9UL68 1186 aa10.05□□□□□ -0.8
VPS45-207ENST00000477558 EIF4G1Q04637 1599 aaKnown RBP10.02□□□□□ -0.8
VPS45-207ENST00000477558 KDM4FA0A1W2PPD8 638 aa10.02□□□□□ -0.81
VPS45-207ENST00000477558 ANO8Q9HCE9 1232 aaPredicted RBP10.02□□□□□ -0.81
VPS45-207ENST00000477558 NUDT7P0C024 238 aa10.01□□□□□ -0.81
VPS45-207ENST00000477558 PTGER2P43116 358 aa10.01□□□□□ -0.81
VPS45-207ENST00000477558 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10□□□□□ -0.81
VPS45-207ENST00000477558 DDX12PQ92771 950 aa10□□□□□ -0.81
VPS45-207ENST00000477558 GRXCR2A6NFK2 248 aa9.99□□□□□ -0.81
VPS45-207ENST00000477558 ZNF316A6NFI3 1004 aaPredicted RBP9.97□□□□□ -0.81
VPS45-207ENST00000477558 LMOD2Q6P5Q4 547 aa9.96□□□□□ -0.82
VPS45-207ENST00000477558 CC2D2AQ9P2K1 1620 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms